CK938402

Overview
NameCK938402
Unique NameCK938402
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length772
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938402 vs. ExPASy Swiss-Prot
Match: PEPA_BOVIN (Pepsin A OS=Bos taurus GN=PGA PE=1 SV=2)

HSP 1 Score: 76.2554 bits (186), Expect = 2.143e-13
Identity = 50/134 (37.31%), Postives = 67/134 (50.00%), Query Frame = 3
Query:  132 GDSAVCS-ACEMTVVWVQNQLKQKQTK-EKVLSYINELCDSLPNPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 527
            G+S  CS  C+  V    + L    T    + SYI    DS     GE +I C  I ++P++ FTI    + + P  YIL++      +C SGF   D+    G LWILGDVF+  Y TVFD G  +IG A  A
Sbjct:  247 GESIACSDGCQAIVDTGTSLLAGPTTAISNIQSYIGASEDS----SGEVVISCSSIDSLPDIVFTINGVQYPVPPSAYILQSNG----ICSSGFEGMDISTSSGDLWILGDVFIRQYFTVFDRGNNQIGLAPVA 372          
BLAST of CK938402 vs. ExPASy Swiss-Prot
Match: RENI_CALJA (Renin OS=Callithrix jacchus GN=REN PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.234e-13
Identity = 32/84 (38.10%), Postives = 48/84 (57.14%), Query Frame = 3
Query:  273 IIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 524
            ++ C   PT+P++SF +G K + L+   Y+ +      ++C     A D+PPP GP W LG  F+  ++T FD G  RIGFA A
Sbjct:  316 VVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRGNNRIGFALA 399          
BLAST of CK938402 vs. ExPASy Swiss-Prot
Match: PEPA_SORUN (Pepsin A OS=Sorex unguiculatus GN=PGA PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 6.234e-13
Identity = 44/132 (33.33%), Postives = 61/132 (46.21%), Query Frame = 3
Query:  132 GDSAVCSACEMTVVWVQNQLKQKQTKEKVLSYINELCDSLPNPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 527
            G S  C+     +V     L    T    ++ I     +  N  G+  + C  I  +P++ FTI    + L    YIL++ EG    C SGF   D+P   G LWILGDVF+  Y TVFD    ++G A  A
Sbjct:  262 GQSIACNGGCQAIVDTGTSLLSGPTN--AIANIQSKIGASQNSQGQMAVSCSSIKNLPDIVFTINGIQYPLPASAYILQSQEG----CSSGFQGMDIPTSSGELWILGDVFIRQYFTVFDRANNQVGLAPVA 387          
BLAST of CK938402 vs. ExPASy Swiss-Prot
Match: PEPA2_MACFU (Pepsin A-2/A-3 OS=Macaca fuscata fuscata PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 8.142e-13
Identity = 37/91 (40.66%), Postives = 51/91 (56.04%), Query Frame = 3
Query:  255 NPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 527
            N  GE ++ C  I ++P++ FTI    + + P  YIL++       CISGF   D+P   G LWILGDVF+  Y TVFD    ++G A  A
Sbjct:  302 NSDGEMVVSCSAISSLPDIVFTINGIQYPVPPSAYILQSQGS----CISGFQGMDVPTESGELWILGDVFIRQYFTVFDRANNQVGLAPVA 388          
BLAST of CK938402 vs. ExPASy Swiss-Prot
Match: PEPA_MACMU (Pepsin A OS=Macaca mulatta GN=PGA PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.063e-12
Identity = 37/91 (40.66%), Postives = 50/91 (54.95%), Query Frame = 3
Query:  255 NPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 527
            N  GE ++ C  I ++P++ FTI    + L P  YIL++       C SGF   D+P   G LWILGDVF+  Y TVFD    ++G A  A
Sbjct:  302 NSDGEMVVSCSAISSLPDIVFTINGVQYPLPPSAYILQSQGS----CTSGFQGMDVPTESGELWILGDVFIRQYFTVFDRANNQVGLAPVA 388          
BLAST of CK938402 vs. ExPASy Swiss-Prot
Match: PEPA4_MACFU (Pepsin A-4 OS=Macaca fuscata fuscata GN=PGA PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.063e-12
Identity = 37/91 (40.66%), Postives = 50/91 (54.95%), Query Frame = 3
Query:  255 NPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 527
            N  GE ++ C  I ++P++ FTI    + L P  YIL++       C SGF   D+P   G LWILGDVF+  Y TVFD    ++G A  A
Sbjct:  302 NSDGEMVVSCSAISSLPDIVFTINGVQYPLPPSAYILQSQGS----CTSGFQGMDVPTESGELWILGDVFIRQYFTVFDRANNQVGLAPVA 388          
BLAST of CK938402 vs. ExPASy Swiss-Prot
Match: CARP_NEUCR (Vacuolar protease A OS=Neurospora crassa GN=pep-4 PE=3 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 1.063e-12
Identity = 36/87 (41.38%), Postives = 52/87 (59.77%), Query Frame = 3
Query:  264 GESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 524
            G+  IDCG+  ++ +V+FT+    F L PE YIL+        C+S FM  D+P P GPL ILGD F+  Y++++D G   +G A A
Sbjct:  312 GQFTIDCGKKSSLEDVTFTLAGYNFTLGPEDYILEASGS----CLSTFMGMDMPAPVGPLAILGDAFLRKYYSIYDLGADTVGIATA 394          
BLAST of CK938402 vs. ExPASy Swiss-Prot
Match: PEPA_HUMAN (Pepsin A OS=Homo sapiens GN=PGA3 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.389e-12
Identity = 38/91 (41.76%), Postives = 53/91 (58.24%), Query Frame = 3
Query:  255 NPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 527
            N  G+ ++ C  I ++P++ FTI    + + P  YIL++ EG    CISGF   +LP   G LWILGDVF+  Y TVFD    ++G A  A
Sbjct:  302 NSDGDMVVSCSAISSLPDIVFTINGVQYPVPPSAYILQS-EGS---CISGFQGMNLPTESGELWILGDVFIRQYFTVFDRANNQVGLAPVA 388          
BLAST of CK938402 vs. ExPASy Swiss-Prot
Match: RENI_SHEEP (Renin OS=Ovis aries GN=REN PE=2 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.094e-12
Identity = 32/86 (37.21%), Postives = 51/86 (59.30%), Query Frame = 3
Query:  267 ESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEA 524
            E +++C ++PT+P++SF +G K + L+   Y+L+        C       D+PPP GP+W+LG  F+  ++T FD    RIGFA A
Sbjct:  315 EYVVNCNQMPTLPDISFHLGGKAYTLTSADYVLQDPYNNIS-CTLALHGMDIPPPTGPVWVLGATFIRKFYTEFDRRNNRIGFALA 399          
BLAST of CK938402 vs. ExPASy Swiss-Prot
Match: PEPA1_MACFU (Pepsin A-1 OS=Macaca fuscata fuscata GN=PGA PE=1 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.094e-12
Identity = 36/91 (39.56%), Postives = 50/91 (54.95%), Query Frame = 3
Query:  255 NPMGESIIDCGRIPTMPNVSFTIGDKIFNLSPEQYILKTGEGIAEVCISGFMAFDLPPPRGPLWILGDVFMGVYHTVFDSGKLRIGFAEAA 527
            N  GE ++ C  I ++P++ FTI    + + P  YIL++       C SGF   D+P   G LWILGDVF+  Y TVFD    ++G A  A
Sbjct:  302 NSDGEMVVSCSAISSLPDIVFTINGIQYPVPPSAYILQSQGS----CTSGFQGMDVPTESGELWILGDVFIRQYFTVFDRANNQVGLAPVA 388          
The following BLAST results are available for this feature:
BLAST of CK938402 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 65
Match NameE-valueIdentityDescription
PEPA_BOVIN2.143e-1337.31Pepsin A OS=Bos taurus GN=PGA PE=1 SV=2[more]
RENI_CALJA6.234e-1338.10Renin OS=Callithrix jacchus GN=REN PE=2 SV=1[more]
PEPA_SORUN6.234e-1333.33Pepsin A OS=Sorex unguiculatus GN=PGA PE=2 SV=1[more]
PEPA2_MACFU8.142e-1340.66Pepsin A-2/A-3 OS=Macaca fuscata fuscata PE=1 SV=1[more]
PEPA_MACMU1.063e-1240.66Pepsin A OS=Macaca mulatta GN=PGA PE=2 SV=1[more]
PEPA4_MACFU1.063e-1240.66Pepsin A-4 OS=Macaca fuscata fuscata GN=PGA PE=1 S... [more]
CARP_NEUCR1.063e-1241.38Vacuolar protease A OS=Neurospora crassa GN=pep-4 ... [more]
PEPA_HUMAN1.389e-1241.76Pepsin A OS=Homo sapiens GN=PGA3 PE=1 SV=1[more]
RENI_SHEEP3.094e-1237.21Renin OS=Ovis aries GN=REN PE=2 SV=1[more]
PEPA1_MACFU3.094e-1239.56Pepsin A-1 OS=Macaca fuscata fuscata GN=PGA PE=1 S... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004443_C07 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IVF_C07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938402 ID=CK938402; Name=CK938402; organism=Citrus sinensis; type=EST; length=772bp
GGGGGGATCTCTTAGTATCAGGGCTACTACCTGAGAAAGTATGTCAGCAG
ATTGGTTTATGTGCTTTCAATGGCGCTGAATATGTGAGTACTGGGATCAA
GACCGTGGTTGAGAAGGAAAACGTATCAGCCGGGGATAGTGCTGTGTGCA
GTGCTTGTGAAATGACCGTGGTTTGGGTCCAGAATCAGCTAAAACAAAAG
CAAACAAAGGAGAAAGTACTCAGTTATATAAATGAGCTCTGCGACAGCCT
GCCAAATCCGATGGGAGAATCAATTATTGACTGTGGTCGCATTCCAACCA
TGCCAAATGTTTCATTCACCATCGGAGACAAAATTTTCAACCTCTCTCCA
GAGCAGTATATTCTGAAAACCGGAGAGGGGATTGCAGAAGTCTGCATCAG
TGGCTTCATGGCTTTCGACCTGCCTCCTCCAAGGGGTCCTCTGTGGATTC
TGGGAGATGTATTCATGGGGGTTTATCACACTGTTTTCGACTCTGGTAAG
CTCCGGATCGGCTTTGCTGAGGCTGCGTAATGATCTACTTACTGTCAAGT
TTTTATGTAGTAGCAGCGATCATCACCTGCTCATATGAGGAGGAGGGTTG
TAGAATGTAGATTATGGTTTTCATGTACTGTAAAACGATCAGTATGCTTT
TATGCATAACTATCATCATCATCACCACAGATGATATGCTGATATATACT
TATGTAAAATCCTATCATCCTATGTTTAAAGTACTTCAATTTTAAAAAAA
AAAAAAAAAAAAAAAAAAAAAA
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