CX675489

Overview
NameCX675489
Unique NameCX675489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length569
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: CDC2B_ANTMA (Cell division control protein 2 homolog B (Fragment) OS=Antirrhinum majus GN=CDC2B PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 1.082e-86
Identity = 82/92 (89.13%), Postives = 87/92 (94.57%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMVNQRPLFPGNSEIDELFKI 568
            HRDLKPQN LIDR +N +KLADFGLARAFGIPVRTFTHEVVTLWYRAPE+LLGSRHYS PVDVWSVGCIFAEMVNQ+PLFPG+SEIDEL KI
Sbjct:  112 HRDLKPQNLLIDRGSNTIKLADFGLARAFGIPVRTFTHEVVTLWYRAPEVLLGSRHYSTPVDVWSVGCIFAEMVNQKPLFPGDSEIDELHKI 203          

HSP 2 Score: 165.236 bits (417), Expect = 1.082e-86
Identity = 80/97 (82.47%), Postives = 87/97 (89.69%), Query Frame = 3
Query:    3 ETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 293
            E IALKKIRLEQEDEGVPSTAIREISLLKEM H NIV L+DVVH EK+LYLVFEYLDLDLKKHMDSCP+F+ D  ++K FL QILRG+AYCHSHRVL
Sbjct:   15 EDIALKKIRLEQEDEGVPSTAIREISLLKEMHHENIVNLKDVVHREKRLYLVFEYLDLDLKKHMDSCPEFSQDLHMVKMFLCQILRGVAYCHSHRVL 111          
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: CDK5_DICDI (Cell division protein kinase 5 homolog OS=Dictyostelium discoideum GN=cdk5 PE=2 SV=2)

HSP 1 Score: 146.747 bits (369), Expect = 4.853e-69
Identity = 67/92 (72.83%), Postives = 80/92 (86.96%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMVNQRPLFPGNSEIDELFKI 568
            HRDLKPQN LI+R+   LKLADFGLARAFGIPVRT++HEVVTLWYRAP++L+GSR YS P+D+WS GCIFAEM + RPLFPG+   D+LF+I
Sbjct:  124 HRDLKPQNLLINRK-GELKLADFGLARAFGIPVRTYSHEVVTLWYRAPDVLMGSRKYSTPIDIWSAGCIFAEMASGRPLFPGSGTSDQLFRI 214          

HSP 2 Score: 134.806 bits (338), Expect = 4.853e-69
Identity = 64/97 (65.98%), Postives = 81/97 (83.51%), Query Frame = 3
Query:    3 ETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 293
            E +ALK+IRL+ EDEGVP TAIREISLLKE++H NIVRL DV+H+E+KL LVFEYLD DLKK++D C    + P  IK+F+YQ+L+G+A+CH HRVL
Sbjct:   28 EIVALKRIRLDSEDEGVPCTAIREISLLKELKHPNIVRLHDVIHTERKLTLVFEYLDQDLKKYLDECGGEISKP-TIKSFMYQLLKGVAFCHDHRVL 123          
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: CDC28_CANAL (Cell division control protein 28 OS=Candida albicans GN=CDC28 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 6.324e-69
Identity = 71/92 (77.17%), Postives = 82/92 (89.13%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMVNQRPLFPGNSEIDELFKI 568
            HRDLKPQN LID+  N LKLADFGLARAFG+P+R +THEVVTLWYRAPEILLG + YS  VD+WSVGCIFAEM N++PLFPG+SEIDE+F+I
Sbjct:  131 HRDLKPQNLLIDKEGN-LKLADFGLARAFGVPLRAYTHEVVTLWYRAPEILLGGKQYSTGVDMWSVGCIFAEMCNRKPLFPGDSEIDEIFRI 221          

HSP 2 Score: 128.642 bits (322), Expect = 6.324e-69
Identity = 66/97 (68.04%), Postives = 79/97 (81.44%), Query Frame = 3
Query:    9 IALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEK-KLYLVFEYLDLDLKKHMDSCPDFAN-DPRLIKTFLYQILRGIAYCHSHRVL 293
            +ALKKIRLE EDEGVPSTAIREISLLKEM+  NIVRL D++HS+  KLYLVFE+LDLDLKK+M+S P        +IK F+ Q++RGI +CHSHRVL
Sbjct:   34 VALKKIRLESEDEGVPSTAIREISLLKEMKDDNIVRLYDIIHSDSHKLYLVFEFLDLDLKKYMESIPQGVGLGANMIKRFMNQLIRGIKHCHSHRVL 130          
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: CDK3_HUMAN (Cell division protein kinase 3 OS=Homo sapiens GN=CDK3 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.076e-68
Identity = 68/92 (73.91%), Postives = 82/92 (89.13%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMVNQRPLFPGNSEIDELFKI 568
            HRDLKPQN LI+    A+KLADFGLARAFG+P+RT+THEVVTLWYRAPEILLGS+ Y+  VD+WS+GCIFAEMV ++ LFPG+SEID+LF+I
Sbjct:  125 HRDLKPQNLLINE-LGAIKLADFGLARAFGVPLRTYTHEVVTLWYRAPEILLGSKFYTTAVDIWSIGCIFAEMVTRKALFPGDSEIDQLFRI 215          

HSP 2 Score: 132.88 bits (333), Expect = 1.076e-68
Identity = 64/97 (65.98%), Postives = 82/97 (84.54%), Query Frame = 3
Query:    3 ETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 293
            + +ALKKIRL+ E EGVPSTAIREISLLKE++H NIVRL DVVH+E+KLYLVFE+L  DLKK+MDS P       LIK++L+Q+L+G+++CHSHRV+
Sbjct:   28 QLVALKKIRLDLEMEGVPSTAIREISLLKELKHPNIVRLLDVVHNERKLYLVFEFLSQDLKKYMDSTPGSELPLHLIKSYLFQLLQGVSFCHSHRVI 124          
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAKH (Cell division control protein 2 homolog OS=Plasmodium knowlesi (strain H) GN=CRK2 PE=3 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 6.904e-68
Identity = 70/92 (76.09%), Postives = 80/92 (86.96%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMVNQRPLFPGNSEIDELFKI 568
            HRDLKPQN LI+R    LK+ADFGLARAFGIPVR +THEVVTLWYRAP+IL+GS+ YS P+D+WSVGCIFAEMVN RPLFPG SE D+L +I
Sbjct:  123 HRDLKPQNLLINRE-GELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDILMGSKKYSTPIDIWSVGCIFAEMVNGRPLFPGVSETDQLMRI 213          

HSP 2 Score: 128.642 bits (322), Expect = 6.904e-68
Identity = 64/97 (65.98%), Postives = 79/97 (81.44%), Query Frame = 3
Query:    3 ETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 293
            ET ALKKIRLE+EDEG+PSTAIREIS+LKE++H NIV+L DV+H++K+L LVFE+LD DLKK +D C D   +    K+FL Q+L GIAYCH HRVL
Sbjct:   27 ETFALKKIRLEKEDEGIPSTAIREISILKELKHSNIVKLYDVIHTKKRLILVFEHLDQDLKKLLDVC-DGGLESVTAKSFLLQLLSGIAYCHEHRVL 122          
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: CDC2H_PLAVI (Cell division control protein 2 homolog OS=Plasmodium vivax GN=CRK2 PE=3 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 1.174e-67
Identity = 70/92 (76.09%), Postives = 80/92 (86.96%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMVNQRPLFPGNSEIDELFKI 568
            HRDLKPQN LI+R    LK+ADFGLARAFGIPVR +THEVVTLWYRAP+IL+GS+ YS P+D+WSVGCIFAEMVN RPLFPG SE D+L +I
Sbjct:  123 HRDLKPQNLLINRE-GELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDILMGSKKYSTPIDMWSVGCIFAEMVNGRPLFPGVSETDQLMRI 213          

HSP 2 Score: 128.642 bits (322), Expect = 1.174e-67
Identity = 64/97 (65.98%), Postives = 79/97 (81.44%), Query Frame = 3
Query:    3 ETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 293
            ET ALKKIRLE+EDEG+PSTAIREIS+LKE++H NIV+L DV+H++K+L LVFE+LD DLKK +D C D   +    K+FL Q+L GIAYCH HRVL
Sbjct:   27 ETFALKKIRLEKEDEGIPSTAIREISILKELKHSNIVKLYDVIHTKKRLILVFEHLDQDLKKLLDVC-DGGLESVTAKSFLLQLLSGIAYCHEHRVL 122          
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: CDK2_HUMAN (Cell division protein kinase 2 OS=Homo sapiens GN=CDK2 PE=1 SV=2)

HSP 1 Score: 149.443 bits (376), Expect = 1.531e-67
Identity = 70/92 (76.09%), Postives = 82/92 (89.13%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMVNQRPLFPGNSEIDELFKI 568
            HRDLKPQN LI+    A+KLADFGLARAFG+PVRT+THEVVTLWYRAPEILLG ++YS  VD+WS+GCIFAEMV +R LFPG+SEID+LF+I
Sbjct:  125 HRDLKPQNLLINTE-GAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 215          

HSP 2 Score: 127.102 bits (318), Expect = 1.531e-67
Identity = 63/97 (64.95%), Postives = 78/97 (80.41%), Query Frame = 3
Query:    3 ETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 293
            E +ALKKIRL+ E EGVPSTAIREISLLKE+ H NIV+L DV+H+E KLYLVFE+L  DLKK MD+         LIK++L+Q+L+G+A+CHSHRVL
Sbjct:   28 EVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 124          
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: CDK2_CARAU (Cell division protein kinase 2 OS=Carassius auratus GN=cdk2 PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.531e-67
Identity = 67/92 (72.83%), Postives = 82/92 (89.13%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMVNQRPLFPGNSEIDELFKI 568
            HRDLKPQN LI+ +   +KLADFGLARAFG+PVRT+THEVVTLWYRAPEILLG ++YS  VD+WS+GCIFAEM+ ++ LFPG+SEID+LF+I
Sbjct:  125 HRDLKPQNLLINAQ-GEIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMITRKALFPGDSEIDQLFRI 215          

HSP 2 Score: 130.183 bits (326), Expect = 1.531e-67
Identity = 63/97 (64.95%), Postives = 79/97 (81.44%), Query Frame = 3
Query:    3 ETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 293
            ET+ALKKIRL+ E EGVPSTAIREISLLKE+ H NIV+L DV+H+E KLYLVFE+L  DLK+ MDS         L+K++L+Q+L+G+A+CHSHRVL
Sbjct:   28 ETVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLHDVIHTENKLYLVFEFLHQDLKRFMDSSTVTGISLPLVKSYLFQLLQGLAFCHSHRVL 124          
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: CDK2_XENLA (Cell division protein kinase 2 OS=Xenopus laevis GN=cdk2 PE=1 SV=3)

HSP 1 Score: 148.673 bits (374), Expect = 1.996e-67
Identity = 70/92 (76.09%), Postives = 81/92 (88.04%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMVNQRPLFPGNSEIDELFKI 568
            HRDLKPQN LI+    A+KLADFGLARAFG+PVRTFTHEVVTLWYRAPEILLG + YS  VD+WS+GCIFAEM+ +R LFPG+SEID+LF+I
Sbjct:  125 HRDLKPQNLLINS-DGAIKLADFGLARAFGVPVRTFTHEVVTLWYRAPEILLGCKFYSTAVDIWSLGCIFAEMITRRALFPGDSEIDQLFRI 215          

HSP 2 Score: 127.487 bits (319), Expect = 1.996e-67
Identity = 62/97 (63.92%), Postives = 78/97 (80.41%), Query Frame = 3
Query:    3 ETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 293
            E +ALKKIRL+ E EGVPSTAIREISLLKE+ H NIV+L DV+H+E KLYLVFE+L+ DLKK MD          L+K++L+Q+L+G+A+CHSHRVL
Sbjct:   28 EIVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLNQDLKKFMDGSNISGISLALVKSYLFQLLQGLAFCHSHRVL 124          
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: CDK2_CRIGR (Cell division protein kinase 2 OS=Cricetulus griseus GN=CDK2 PE=2 SV=1)

HSP 1 Score: 148.288 bits (373), Expect = 2.603e-67
Identity = 69/92 (75.00%), Postives = 82/92 (89.13%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMVNQRPLFPGNSEIDELFKI 568
            HRDLKPQN LI+    ++KLADFGLARAFG+PVRT+THEVVTLWYRAPEILLG ++YS  VD+WS+GCIFAEMV +R LFPG+SEID+LF+I
Sbjct:  125 HRDLKPQNLLINAE-GSIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI 215          

HSP 2 Score: 127.487 bits (319), Expect = 2.603e-67
Identity = 63/97 (64.95%), Postives = 78/97 (80.41%), Query Frame = 3
Query:    3 ETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 293
            E +ALKKIRL+ E EGVPSTAIREISLLKE+ H NIV+L DV+H+E KLYLVFE+L  DLKK MD+         LIK++L+Q+L+G+A+CHSHRVL
Sbjct:   28 EVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASAVTGIPLPLIKSYLFQLLQGLAFCHSHRVL 124          
The following BLAST results are available for this feature:
BLAST of CX675489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDC2B_ANTMA1.082e-8689.13Cell division control protein 2 homolog B (Fragmen... [more]
CDK5_DICDI4.853e-6972.83Cell division protein kinase 5 homolog OS=Dictyost... [more]
CDC28_CANAL6.324e-6977.17Cell division control protein 28 OS=Candida albica... [more]
CDK3_HUMAN1.076e-6873.91Cell division protein kinase 3 OS=Homo sapiens GN=... [more]
CDC2H_PLAKH6.904e-6876.09Cell division control protein 2 homolog OS=Plasmod... [more]
CDC2H_PLAVI1.174e-6776.09Cell division control protein 2 homolog OS=Plasmod... [more]
CDK2_HUMAN1.531e-6776.09Cell division protein kinase 2 OS=Homo sapiens GN=... [more]
CDK2_CARAU1.531e-6772.83Cell division protein kinase 2 OS=Carassius auratu... [more]
CDK2_XENLA1.996e-6776.09Cell division protein kinase 2 OS=Xenopus laevis G... [more]
CDK2_CRIGR2.603e-6775.00Cell division protein kinase 2 OS=Cricetulus grise... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_62E12_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62E12-J24-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675489 ID=CX675489; Name=CX675489; organism=Citrus sinensis; type=EST; length=569bp
ATGAGACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGT
GTGCCTAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCA
TGGGAACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTT
ATCTGGTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCT
TGCCCAGATTTTGCTAATGATCCGCGTCTGATAAAAACATTCCTTTATCA
AATTCTACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTCATCGAGA
TTTGAAACCACAAAATTGGCTGATAGATCGTCGTACGAATGCACTAAAGC
TAGCAGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTAGGACATTT
ACACATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACTAGG
ATCTCGCCATTACTCTGCTCCGGTTGATGTGTGGTCGGTGGGATGTATAT
TTGCTGAGATGGTGAACCAGCGGCCATTGTTTCCAGGAAACTCTGAGATT
GATGAGTTATTCAAGATCT
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