CX675489

Overview
NameCX675489
Unique NameCX675489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length569
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: HOG1_WALIC (Mitogen-activated protein kinase HOG1 (Fragment) OS=Wallemia ichthyophaga GN=HOG1 PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 2.360e-17
Identity = 45/89 (50.56%), Postives = 60/89 (67.42%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMVNQRPLFPGNSEIDEL 559
            HRDLKP N LI+   + LK+ DFGLAR   +     T  V T +Y+APEI+L  + Y + VD+WSVGCIFAEM++ RP+FPG   + +L
Sbjct:   73 HRDLKPSNILINENCD-LKICDFGLAR---LQDPQMTGYVSTRYYKAPEIMLTWQEYDSAVDIWSVGCIFAEMIDGRPIFPGKDHVHQL 157          
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: CSK2A_CAEEL (Casein kinase II subunit alpha OS=Caenorhabditis elegans GN=kin-3 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 3.117e-17
Identity = 34/93 (36.56%), Postives = 56/93 (60.22%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMV-NQRPLFPGNSEIDELFKI 568
            HRD+KP N +ID     L+L D+GLA  F  P + +   V + +++ PE+L+  + Y   +D+WS+GC+ A M+  + P F G+   D+L +I
Sbjct:  153 HRDVKPHNVMIDAEKRELRLIDWGLAE-FYHPRQDYNVRVASRYFKGPELLVDYQCYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRI 244          

HSP 2 Score: 38.1206 bits (87), Expect = 3.117e-17
Identity = 24/79 (30.38%), Postives = 46/79 (58.23%), Query Frame = 3
Query:   69 REISLLKEMQHG-NIVRLQDVVHS--EKKLYLVFEYLD-LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 293
            REI +L+ ++ G NI+ L DVV     +   L+FE+++  D K+   +  D+      I+ +LY++L+ + +CHS  ++
Sbjct:   79 REIKILENLRGGTNIITLLDVVKDPISRTPALIFEHVNNSDFKQLYQTLSDYD-----IRYYLYELLKALDFCHSQGIM 152          
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: HSL1_YEAST (Probable serine/threonine-protein kinase HSL1 OS=Saccharomyces cerevisiae GN=HSL1 PE=1 SV=1)

HSP 1 Score: 63.1586 bits (152), Expect = 6.642e-17
Identity = 32/84 (38.10%), Postives = 49/84 (58.33%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCI-FAEMVNQRPLFPGN 541
            HRDLKP+N L+D++   +K+ADFG+A A  +P +       +  Y +PEI++G  ++  P DVWS G + FA +    P    N
Sbjct:  237 HRDLKPENLLLDKKNRRIKIADFGMA-ALELPNKLLKTSCGSPHYASPEIVMGRPYHGGPSDVWSCGIVLFALLTGHLPFNDDN 319          

HSP 2 Score: 43.5134 bits (101), Expect = 6.642e-17
Identity = 25/78 (32.05%), Postives = 41/78 (52.56%), Query Frame = 3
Query:   69 REISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLD----LDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRV 290
            REI ++K + H N++ L +V  ++ +LYLV EY+D     D        P+     R    +  QI+ G++YCHS  +
Sbjct:  163 REIVIMKLISHTNVMALFEVWENKSELYLVLEYVDGGELFDYLVSKGKLPE-----REAIHYFKQIVEGVSYCHSFNI 235          
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: MOK_HUMAN (MAPK/MAK/MRK overlapping kinase OS=Homo sapiens GN=RAGE PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 1.530e-16
Identity = 42/92 (45.65%), Postives = 61/92 (66.30%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMVNQRPLFPGNSEIDELFKI 568
            HRD+KP+N LI  + + LKL DFG  R+     + +T  + T WYRAPE LL    Y+  +D+WS GC+F E+ + +PLFPG +E+D++ KI
Sbjct:  126 HRDVKPENILI--KQDVLKLGDFGSCRSV-YSKQPYTEYISTRWYRAPECLLTDGFYTYKMDLWSAGCVFYEIASLQPLFPGVNELDQISKI 214          
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: BRSK2_MOUSE (BR serine/threonine-protein kinase 2 OS=Mus musculus GN=Brsk2 PE=1 SV=2)

HSP 1 Score: 53.1434 bits (126), Expect = 1.924e-16
Identity = 31/102 (30.39%), Postives = 56/102 (54.90%), Query Frame = 3
Query:    3 ETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYL------DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRV 290
            + +A+K +  E+  E V     REI++LK ++H ++++L DV  ++K LYLV E++      D  +KK   +       P+  + F  QI+  + +CHSH +
Sbjct:   44 QKVAIKIVNREKLSESVLMKVEREIAILKLIEHPHVLKLHDVYENKKYLYLVLEHVSGGELFDYLVKKGRLT-------PKEARKFFRQIISALDFCHSHSI 138          

HSP 2 Score: 51.9878 bits (123), Expect = 1.924e-16
Identity = 31/84 (36.90%), Postives = 45/84 (53.57%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCI-FAEMVNQRPLFPGN 541
            HRDLKP+N L+D R N +++ADFG+A +  +          +  Y  PE++ G ++     DVWS G I FA +V   P    N
Sbjct:  140 HRDLKPENLLLDERNN-IRIADFGMA-SLQVGDSLLETSCGSPHYACPEVIRGEKYDGRKADVWSCGVILFALLVGALPFDDDN 221          
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: MRK1_YEAST (Serine/threonine-protein kinase MRK1 OS=Saccharomyces cerevisiae GN=MRK1 PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 1.998e-16
Identity = 41/92 (44.57%), Postives = 60/92 (65.22%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMVNQRPLFPGNSEIDELFKI 568
            HRD+KPQN L+D  T + K+ DFG A+    P +     + + +YRAPE++ G+ +YS  VDVWS  C+ AE++  +PLF G S ID+L +I
Sbjct:  287 HRDIKPQNLLVDPTTFSFKICDFGSAKCLK-PDQPNVSYICSRYYRAPELMFGATNYSNQVDVWSSACVIAELLLGKPLFSGESGIDQLVEI 377          
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: MOK_MOUSE (MAPK/MAK/MRK overlapping kinase OS=Mus musculus GN=Rage PE=1 SV=1)

HSP 1 Score: 85.5001 bits (210), Expect = 1.998e-16
Identity = 41/92 (44.57%), Postives = 61/92 (66.30%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMVNQRPLFPGNSEIDELFKI 568
            HRD+KP+N L+  + + LKL DFG  R+     + +T  + T WYRAPE LL    Y+  +D+WS GC+F E+ + +PLFPG +E+D++ KI
Sbjct:  126 HRDVKPENILV--KQDVLKLGDFGSCRSV-YSKQPYTEYISTRWYRAPECLLTDGFYTYKMDLWSAGCVFYEIASLQPLFPGVNELDQISKI 214          
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: MRKA_DICDI (Probable serine/threonine-protein kinase MARK-A OS=Dictyostelium discoideum GN=mrkA PE=3 SV=1)

HSP 1 Score: 54.299 bits (129), Expect = 3.224e-16
Identity = 33/94 (35.11%), Postives = 51/94 (54.26%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAF--GIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMVNQRPLFPGNSEIDELFKI 568
            HRDLKP+N L+D     +K+ DFGL+  F  G  ++TF        Y +PE++L   +    VDVWS+G +   +V     F G++ ++   KI
Sbjct:  230 HRDLKPENLLLDCNRQ-IKIIDFGLSNVFTPGSYLKTFCGSPT---YASPELILRKEYNGPSVDVWSMGVVLFVLVTGYLPFDGDNYVELFQKI 319          

HSP 2 Score: 50.0618 bits (118), Expect = 3.224e-16
Identity = 29/97 (29.90%), Postives = 47/97 (48.45%), Query Frame = 3
Query:    3 ETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 293
            E +A+K I   + D        RE+ ++K + H NI+RL +V+ + + LYL+ EY                 + +  +TF  QI+  I YCHS R +
Sbjct:  134 EKVAIKIINKGKLDPETLKMVQREVRIMKLLHHPNIIRLYEVIETSRALYLIMEYAGEGEVMDFMIAHGVLTESQ-ARTFFTQIVSAINYCHSKRAV 229          
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: MCK1_YEAST (Protein kinase MCK1 OS=Saccharomyces cerevisiae GN=MCK1 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 3.300e-16
Identity = 32/92 (34.78%), Postives = 56/92 (60.87%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMVNQRPLFPGNSEIDELFKI 568
            HRD+KP N L+D  T  LK+ DFG A+       + ++ + + +YRAPE+++G   Y+  +D+W +GC+  EM+  + +F G   + +L +I
Sbjct:  162 HRDIKPSNVLVDPETGVLKICDFGSAKKLEHNQPSISY-ICSRFYRAPELIIGCTQYTTQIDIWGLGCVMGEMLIGKAIFQGQEPLLQLREI 252          

HSP 2 Score: 30.8018 bits (68), Expect = 3.300e-16
Identity = 24/99 (24.24%), Postives = 46/99 (46.46%), Query Frame = 3
Query:   12 ALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQ----------DVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCH 278
            A+KK+    E +       RE+ +L+   H NIV+LQ          + V+    +  + E L +++ +++ +        + I+ + YQI RG+ Y H
Sbjct:   66 AIKKVPAHTEYKS------RELQILRIADHPNIVKLQYFFTHLSPQDNKVYQHLAMECLPETLQIEINRYVTN--KLEMPLKHIRLYTYQIARGMLYLH 156          
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: BRSK2_HUMAN (BR serine/threonine-protein kinase 2 OS=Homo sapiens GN=BRSK2 PE=1 SV=3)

HSP 1 Score: 53.1434 bits (126), Expect = 4.223e-16
Identity = 31/102 (30.39%), Postives = 56/102 (54.90%), Query Frame = 3
Query:    3 ETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYL------DLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRV 290
            + +A+K +  E+  E V     REI++LK ++H ++++L DV  ++K LYLV E++      D  +KK   +       P+  + F  QI+  + +CHSH +
Sbjct:   43 QKVAIKIVNREKLSESVLMKVEREIAILKLIEHPHVLKLHDVYENKKYLYLVLEHVSGGELFDYLVKKGRLT-------PKEARKFFRQIISALDFCHSHSI 137          

HSP 2 Score: 50.8322 bits (120), Expect = 4.223e-16
Identity = 30/84 (35.71%), Postives = 45/84 (53.57%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCI-FAEMVNQRPLFPGN 541
            HRDLKP+N L+D + N +++ADFG+A +  +          +  Y  PE++ G ++     DVWS G I FA +V   P    N
Sbjct:  139 HRDLKPENLLLDEKNN-IRIADFGMA-SLQVGDSLLETSCGSPHYACPEVIRGEKYDGRKADVWSCGVILFALLVGALPFDDDN 220          
The following BLAST results are available for this feature:
BLAST of CX675489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HOG1_WALIC2.360e-1750.56Mitogen-activated protein kinase HOG1 (Fragment) O... [more]
CSK2A_CAEEL3.117e-1736.56Casein kinase II subunit alpha OS=Caenorhabditis e... [more]
HSL1_YEAST6.642e-1738.10Probable serine/threonine-protein kinase HSL1 OS=S... [more]
MOK_HUMAN1.530e-1645.65MAPK/MAK/MRK overlapping kinase OS=Homo sapiens GN... [more]
BRSK2_MOUSE1.924e-1630.39BR serine/threonine-protein kinase 2 OS=Mus muscul... [more]
MRK1_YEAST1.998e-1644.57Serine/threonine-protein kinase MRK1 OS=Saccharomy... [more]
MOK_MOUSE1.998e-1644.57MAPK/MAK/MRK overlapping kinase OS=Mus musculus GN... [more]
MRKA_DICDI3.224e-1635.11Probable serine/threonine-protein kinase MARK-A OS... [more]
MCK1_YEAST3.300e-1634.78Protein kinase MCK1 OS=Saccharomyces cerevisiae GN... [more]
BRSK2_HUMAN4.223e-1630.39BR serine/threonine-protein kinase 2 OS=Homo sapie... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_62E12_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62E12-J24-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675489 ID=CX675489; Name=CX675489; organism=Citrus sinensis; type=EST; length=569bp
ATGAGACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGT
GTGCCTAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCA
TGGGAACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTT
ATCTGGTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCT
TGCCCAGATTTTGCTAATGATCCGCGTCTGATAAAAACATTCCTTTATCA
AATTCTACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTCATCGAGA
TTTGAAACCACAAAATTGGCTGATAGATCGTCGTACGAATGCACTAAAGC
TAGCAGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTAGGACATTT
ACACATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACTAGG
ATCTCGCCATTACTCTGCTCCGGTTGATGTGTGGTCGGTGGGATGTATAT
TTGCTGAGATGGTGAACCAGCGGCCATTGTTTCCAGGAAACTCTGAGATT
GATGAGTTATTCAAGATCT
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