CX675489

Overview
NameCX675489
Unique NameCX675489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length569
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: CDK5_RAT (Cell division protein kinase 5 OS=Rattus norvegicus GN=Cdk5 PE=1 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.745e-59
Identity = 61/93 (65.59%), Postives = 73/93 (78.49%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMVNQ-RPLFPGNSEIDELFKI 568
            HRDLKPQN LI+R    LKLADFGLARAFGIPVR ++ EVVTLWYR P++L G++ YS  +D+WS GCIFAE+ N  RPLFPGN   D+L +I
Sbjct:  124 HRDLKPQNLLINRN-GELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRI 215          

HSP 2 Score: 123.25 bits (308), Expect = 6.745e-59
Identity = 57/97 (58.76%), Postives = 79/97 (81.44%), Query Frame = 3
Query:    3 ETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 293
            E +ALK++RL+ +DEGVPS+A+REI LLKE++H NIVRL DV+HS+KKL LVFE+ D DLKK+ DSC +   DP ++K+ L+Q+L+G+ +CHS  VL
Sbjct:   28 EIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSC-NGDLDPEIVKSLLFQLLKGLGFCHSRNVL 123          
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: PHO85_DEBHA (Negative regulator of the PHO system OS=Debaryomyces hansenii GN=PHO85 PE=3 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 2.119e-57
Identity = 63/92 (68.48%), Postives = 74/92 (80.43%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMVNQRPLFPGNSEIDELFKI 568
            HRDLKPQN LI+ +   LKL DFGLARAFGIP  TF++EVVTLWYRAP++LLGSR Y+A +D+WS GCIFAEM   +PLFPG S  D+L KI
Sbjct:  129 HRDLKPQNLLINNK-GELKLGDFGLARAFGIPFNTFSNEVVTLWYRAPDVLLGSRAYTASIDIWSAGCIFAEMCTGKPLFPGTSNDDQLIKI 219          

HSP 2 Score: 108.997 bits (271), Expect = 2.119e-57
Identity = 54/98 (55.10%), Postives = 78/98 (79.59%), Query Frame = 3
Query:    3 ETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPD-FANDPRLIKTFLYQILRGIAYCHSHRVL 293
            + +ALK+I L+ E EG PSTAIREISL+KE+ H NIV L DV+H+E KL LVFE++D DLKK+M++  +  A D +++K+F++Q+L+GI +CH +RVL
Sbjct:   32 QLVALKEINLDSE-EGTPSTAIREISLMKELDHENIVTLYDVIHTENKLTLVFEFMDKDLKKYMEAHGNQGALDLKIVKSFIFQLLKGIMFCHDNRVL 128          
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: PHO85_YARLI (Negative regulator of the PHO system OS=Yarrowia lipolytica GN=PHO85 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.121e-57
Identity = 63/89 (70.79%), Postives = 73/89 (82.02%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMVNQRPLFPGNSEIDEL 559
            HRDLKPQN LI+ +   LKLADFGLARAFGIPV TF++EVVTLWYRAP++LLGSR YS  +D+WS GCI AEM   RPLFPG+S  D+L
Sbjct:  128 HRDLKPQNLLINAK-GQLKLADFGLARAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSAGCIMAEMFTGRPLFPGSSNDDQL 215          

HSP 2 Score: 110.538 bits (275), Expect = 2.121e-57
Identity = 57/98 (58.16%), Postives = 76/98 (77.55%), Query Frame = 3
Query:    3 ETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPD-FANDPRLIKTFLYQILRGIAYCHSHRVL 293
            + +ALK+I L+ E EG PSTAIREISL+KE++H NIV L DV+H+E KL LVFEY+D DLKK MD+  +  A + + +K F+YQ+LRGI +CH +RVL
Sbjct:   31 QLVALKEINLDSE-EGTPSTAIREISLMKELKHENIVTLYDVIHTENKLNLVFEYMDKDLKKFMDTNGNKGALETKQVKWFMYQLLRGILFCHDNRVL 127          
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: CC2H1_TRYCO (Cell division control protein 2 homolog 1 OS=Trypanosoma congolense GN=CRK1 PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 7.987e-57
Identity = 61/92 (66.30%), Postives = 71/92 (77.17%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMVNQRPLFPGNSEIDELFKI 568
            HRDLKP N LI R    LKLADFGL RAFGIPV+ +THEVVTLWYR+P++LLGS  Y  PVD+WSVGCIFAEM    PLF G ++ D+L +I
Sbjct:  125 HRDLKPPNLLISREKE-LKLADFGLGRAFGIPVKKYTHEVVTLWYRSPDVLLGSTQYGTPVDIWSVGCIFAEMAIGAPLFAGKNDADQLLRI 215          

HSP 2 Score: 110.538 bits (275), Expect = 7.987e-57
Identity = 54/95 (56.84%), Postives = 71/95 (74.74%), Query Frame = 3
Query:    9 IALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 293
            +ALK+IRLE  +EGVP TAIREIS+LKE++H NIVRL DV HSE +L LVFEY+++DLKK+MD       DP  I+ F+  +L+G+ +CH   VL
Sbjct:   31 VALKRIRLESVEEGVPCTAIREISILKELRHENIVRLLDVCHSENRLNLVFEYMEMDLKKYMDRASGNL-DPATIQEFMRSLLKGVRFCHERNVL 124          
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: CDK5_GLOMM (Cell division protein kinase 5 homolog OS=Glossina morsitans morsitans GN=Cdk5 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.990e-57
Identity = 57/93 (61.29%), Postives = 74/93 (79.57%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMVNQ-RPLFPGNSEIDELFKI 568
            HRDLKPQN LI++    LKLADFGLARAFGIPV+ ++ EVVTLWYR P++L G++ Y+  +D+WS GCIFAE+ +  RPLFPG+  +D+L KI
Sbjct:  124 HRDLKPQNLLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCIFAELADAGRPLFPGSDVLDQLMKI 215          

HSP 2 Score: 119.398 bits (298), Expect = 7.990e-57
Identity = 58/97 (59.79%), Postives = 79/97 (81.44%), Query Frame = 3
Query:    3 ETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 293
            E +ALK++RL+++DEGVPS+A+REI LLKE++H NIVRL DV+HSEKKL LVFE+ D DLKK+ DS  +   D  + ++F+ Q+LRG+A+CHSH VL
Sbjct:   28 EIVALKRVRLDEDDEGVPSSALREICLLKELKHKNIVRLYDVLHSEKKLTLVFEHCDQDLKKYFDSL-NGDIDMAVCRSFMLQLLRGLAFCHSHNVL 123          
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: PHO85_CANAL (Negative regulator of the PHO system OS=Candida albicans GN=PHO85 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 1.357e-56
Identity = 61/92 (66.30%), Postives = 73/92 (79.35%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMVNQRPLFPGNSEIDELFKI 568
            HRDLKPQN LI+ +   LKL DFGLARAFGIP  TF++EVVTLWYRAP++LLGSR Y+  +D+WS GCIFAEM   +PLFPG +  D+L KI
Sbjct:  129 HRDLKPQNLLINNK-GELKLGDFGLARAFGIPFNTFSNEVVTLWYRAPDVLLGSRAYTTSIDIWSAGCIFAEMCTGKPLFPGTANEDQLIKI 219          

HSP 2 Score: 108.997 bits (271), Expect = 1.357e-56
Identity = 55/96 (57.29%), Postives = 75/96 (78.12%), Query Frame = 3
Query:    9 IALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMD-SCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 293
            +ALK+I L+ E EG PSTAIREISL+KE+ H NIV L DV+H+E KL LVFEY+D DLKK+M+      A D +++K+F++Q+L+GI +CH +RVL
Sbjct:   34 VALKEISLDSE-EGTPSTAIREISLMKELDHENIVTLYDVIHTENKLTLVFEYMDKDLKKYMEVHGQQSALDLKVVKSFMFQLLKGIMFCHDNRVL 128          
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: PHO85_CANGA (Negative regulator of the PHO system OS=Candida glabrata GN=PHO85 PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 1.770e-56
Identity = 59/89 (66.29%), Postives = 72/89 (80.90%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMVNQRPLFPGNSEIDEL 559
            HRDLKPQN LI +R   LKL DFGLARAFGIPV TF+ EVVTLWYRAP++L+GSR YS  +D+WS GCI AEM+  +PLFPG ++ ++L
Sbjct:  130 HRDLKPQNLLITKR-GQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQL 217          

HSP 2 Score: 111.309 bits (277), Expect = 1.770e-56
Identity = 57/100 (57.00%), Postives = 77/100 (77.00%), Query Frame = 3
Query:    9 IALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPR-----LIKTFLYQILRGIAYCHSHRVL 293
            +ALK+++L+ E EG PSTAIREISL+KE++H NIVRL DV+H+E KL LVFEY+D DLKK+MDS     N PR     L+K F +Q+L G+A+CH +++L
Sbjct:   32 VALKEVKLDSE-EGTPSTAIREISLMKELKHDNIVRLYDVIHTENKLTLVFEYMDNDLKKYMDS-RTVGNAPRGLEMNLVKYFQWQLLEGLAFCHENKIL 129          
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: PHO85_YEAST (Cyclin-dependent protein kinase PHO85 OS=Saccharomyces cerevisiae GN=PHO85 PE=1 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 2.307e-56
Identity = 59/89 (66.29%), Postives = 73/89 (82.02%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMVNQRPLFPGNSEIDEL 559
            HRDLKPQN LI++R   LKL DFGLARAFGIPV TF+ EVVTLWYRAP++L+GSR YS  +D+WS GCI AEM+  +PLFPG ++ ++L
Sbjct:  131 HRDLKPQNLLINKR-GQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQL 218          

HSP 2 Score: 110.153 bits (274), Expect = 2.307e-56
Identity = 56/100 (56.00%), Postives = 78/100 (78.00%), Query Frame = 3
Query:    9 IALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPR-----LIKTFLYQILRGIAYCHSHRVL 293
            +ALK+++L+ E EG PSTAIREISL+KE++H NIVRL DV+H+E KL LVFE++D DLKK+MDS     N PR     L+K F +Q+L+G+A+CH +++L
Sbjct:   33 VALKEVKLDSE-EGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDS-RTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKIL 130          
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: CRK1_LEIME (Cell division protein kinase 2 homolog CRK1 OS=Leishmania mexicana GN=CRK1 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 2.307e-56
Identity = 60/92 (65.22%), Postives = 69/92 (75.00%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMVNQRPLFPGNSEIDELFKI 568
            HRDLKPQN LI R    LKL DFGL R+F IPVR FT+EVVTLWYR P++LLGS  Y  PVDVWSVGCIF+EM    PLF G ++ D+L +I
Sbjct:  125 HRDLKPQNLLISREKE-LKLGDFGLGRSFAIPVRKFTNEVVTLWYRPPDVLLGSMQYGPPVDVWSVGCIFSEMATGTPLFAGKNDADQLMRI 215          

HSP 2 Score: 112.849 bits (281), Expect = 2.307e-56
Identity = 57/96 (59.38%), Postives = 74/96 (77.08%), Query Frame = 3
Query:    6 TIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 293
            T+ALK+IRL+ E+EGVP TAIREISLLKE++H NIV+L DV HSE +L +VFEYLDLDLKK++D   +   D   I+ F+  +LRG+A+CH   VL
Sbjct:   30 TVALKRIRLDSEEEGVPCTAIREISLLKELRHENIVKLLDVCHSEHRLTIVFEYLDLDLKKYLDR-ENGNLDAATIQHFMRDLLRGVAFCHQRSVL 124          
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: CDK17_MOUSE (Cell division protein kinase 17 OS=Mus musculus GN=Cdk17 PE=1 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 5.087e-56
Identity = 58/92 (63.04%), Postives = 71/92 (77.17%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMVNQRPLFPGNSEIDELFKI 568
            HRDLKPQN LI+ R   LKLADFGLARA  +P +T+++EVVTLWYR P++LLGS  YS  +D+W VGCIF EM + RPLFPG++  DEL  I
Sbjct:  311 HRDLKPQNLLINER-GELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLI 401          

HSP 2 Score: 116.316 bits (290), Expect = 5.087e-56
Identity = 58/95 (61.05%), Postives = 74/95 (77.89%), Query Frame = 3
Query:    9 IALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 293
            +ALK+IRLE E EG P TAIRE+SLLK+++H NIV L D+VH++K L LVFEYLD DLK++MD C +  +    +K FLYQILRG+AYCH  +VL
Sbjct:  218 VALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDKDLKQYMDDCGNIMS-MHNVKLFLYQILRGLAYCHRRKVL 310          
The following BLAST results are available for this feature:
BLAST of CX675489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDK5_RAT6.745e-5965.59Cell division protein kinase 5 OS=Rattus norvegicu... [more]
PHO85_DEBHA2.119e-5768.48Negative regulator of the PHO system OS=Debaryomyc... [more]
PHO85_YARLI2.121e-5770.79Negative regulator of the PHO system OS=Yarrowia l... [more]
CC2H1_TRYCO7.987e-5766.30Cell division control protein 2 homolog 1 OS=Trypa... [more]
CDK5_GLOMM7.990e-5761.29Cell division protein kinase 5 homolog OS=Glossina... [more]
PHO85_CANAL1.357e-5666.30Negative regulator of the PHO system OS=Candida al... [more]
PHO85_CANGA1.770e-5666.29Negative regulator of the PHO system OS=Candida gl... [more]
PHO85_YEAST2.307e-5666.29Cyclin-dependent protein kinase PHO85 OS=Saccharom... [more]
CRK1_LEIME2.307e-5665.22Cell division protein kinase 2 homolog CRK1 OS=Lei... [more]
CDK17_MOUSE5.087e-5663.04Cell division protein kinase 17 OS=Mus musculus GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_62E12_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62E12-J24-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675489 ID=CX675489; Name=CX675489; organism=Citrus sinensis; type=EST; length=569bp
ATGAGACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGT
GTGCCTAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCA
TGGGAACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTT
ATCTGGTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCT
TGCCCAGATTTTGCTAATGATCCGCGTCTGATAAAAACATTCCTTTATCA
AATTCTACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTCATCGAGA
TTTGAAACCACAAAATTGGCTGATAGATCGTCGTACGAATGCACTAAAGC
TAGCAGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTAGGACATTT
ACACATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACTAGG
ATCTCGCCATTACTCTGCTCCGGTTGATGTGTGGTCGGTGGGATGTATAT
TTGCTGAGATGGTGAACCAGCGGCCATTGTTTCCAGGAAACTCTGAGATT
GATGAGTTATTCAAGATCT
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