CX675489

Overview
NameCX675489
Unique NameCX675489
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length569
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: CDK17_RAT (Cell division protein kinase 17 OS=Rattus norvegicus GN=Cdk17 PE=1 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 6.631e-56
Identity = 58/92 (63.04%), Postives = 71/92 (77.17%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMVNQRPLFPGNSEIDELFKI 568
            HRDLKPQN LI+ R   LKLADFGLARA  +P +T+++EVVTLWYR P++LLGS  YS  +D+W VGCIF EM + RPLFPG++  DEL  I
Sbjct:  311 HRDLKPQNLLINER-GELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLI 401          

HSP 2 Score: 115.931 bits (289), Expect = 6.631e-56
Identity = 58/95 (61.05%), Postives = 73/95 (76.84%), Query Frame = 3
Query:    9 IALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 293
            +ALK+IRLE E EG P TAIRE+SLLK+++H NIV L D+VH++K L LVFEYLD DLK++MD C    +    +K FLYQILRG+AYCH  +VL
Sbjct:  218 VALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDKDLKQYMDDCGSIMS-MHNVKLFLYQILRGLAYCHRRKVL 310          
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: CDK17_HUMAN (Cell division protein kinase 17 OS=Homo sapiens GN=CDK17 PE=1 SV=2)

HSP 1 Score: 120.553 bits (301), Expect = 1.127e-55
Identity = 57/92 (61.96%), Postives = 71/92 (77.17%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMVNQRPLFPGNSEIDELFKI 568
            HRDLKPQN LI+ +   LKLADFGLARA  +P +T+++EVVTLWYR P++LLGS  YS  +D+W VGCIF EM + RPLFPG++  DEL  I
Sbjct:  311 HRDLKPQNLLINEK-GELKLADFGLARAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLI 401          

HSP 2 Score: 116.316 bits (290), Expect = 1.127e-55
Identity = 58/95 (61.05%), Postives = 74/95 (77.89%), Query Frame = 3
Query:    9 IALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 293
            +ALK+IRLE E EG P TAIRE+SLLK+++H NIV L D+VH++K L LVFEYLD DLK++MD C +  +    +K FLYQILRG+AYCH  +VL
Sbjct:  218 VALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLDKDLKQYMDDCGNIMS-MHNVKLFLYQILRGLAYCHRRKVL 310          
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: CDK5_DROME (Cell division protein kinase 5 homolog OS=Drosophila melanogaster GN=Cdk5 PE=1 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 1.133e-55
Identity = 56/93 (60.22%), Postives = 73/93 (78.49%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMVNQ-RPLFPGNSEIDELFKI 568
            HRDLKPQN LI++    LKLADFGLARAFGIPV+ ++ EVVTLWYR P++L G++ Y+  +D+WS GCI AE+ +  RPLFPG+  +D+L KI
Sbjct:  124 HRDLKPQNLLINKN-GELKLADFGLARAFGIPVKCYSAEVVTLWYRPPDVLFGAKLYTTSIDMWSAGCILAELADAGRPLFPGSDVLDQLMKI 215          

HSP 2 Score: 117.857 bits (294), Expect = 1.133e-55
Identity = 57/97 (58.76%), Postives = 79/97 (81.44%), Query Frame = 3
Query:    3 ETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 293
            E +ALK++RL+++DEGVPS+A+REI LLKE++H NIVRL DV+HS+KKL LVFE+ D DLKK+ DS  +   D  + ++F+ Q+LRG+A+CHSH VL
Sbjct:   28 EIVALKRVRLDEDDEGVPSSALREICLLKELKHKNIVRLIDVLHSDKKLTLVFEHCDQDLKKYFDSL-NGEIDMAVCRSFMLQLLRGLAFCHSHNVL 123          
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: PEF1_SCHPO (Serine/threonine-protein kinase pef1 OS=Schizosaccharomyces pombe GN=pef1 PE=2 SV=2)

HSP 1 Score: 130.568 bits (327), Expect = 4.268e-55
Identity = 63/92 (68.48%), Postives = 74/92 (80.43%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMVNQRPLFPGNSEIDELFKI 568
            HRDLKPQN LI+ R   LKLADFGLAR+ GIPV TF++EVVTLWYRAP++LLGSR YS  +D+WSVGCI AEM   RPLF G++  D+L KI
Sbjct:  124 HRDLKPQNLLINSR-GELKLADFGLARSIGIPVNTFSNEVVTLWYRAPDVLLGSRVYSTSIDIWSVGCIMAEMATGRPLFAGSNNEDQLLKI 214          

HSP 2 Score: 104.375 bits (259), Expect = 4.268e-55
Identity = 54/98 (55.10%), Postives = 74/98 (75.51%), Query Frame = 3
Query:    3 ETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPD-FANDPRLIKTFLYQILRGIAYCHSHRVL 293
            E +ALK IR++  DEG PSTAIREISL+KE++H NI+ L DV+ +E KL LVFEY++ DLKK+MD+  +  A  P  +K F  Q+L+GI++CH +RVL
Sbjct:   27 EIVALKVIRIDA-DEGTPSTAIREISLMKELRHPNIMSLSDVLQTENKLMLVFEYMEKDLKKYMDTYGNQGALPPSQVKNFTQQLLKGISFCHENRVL 123          
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: CDK16_HUMAN (Cell division protein kinase 16 OS=Homo sapiens GN=CDK16 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 7.216e-55
Identity = 57/89 (64.04%), Postives = 69/89 (77.53%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMVNQRPLFPGNSEIDEL 559
            HRDLKPQN LI+ R   LKLADFGLARA  IP +T+++EVVTLWYR P+ILLGS  YS  +D+W VGCIF EM   RPLFPG++  ++L
Sbjct:  284 HRDLKPQNLLINER-GELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQL 371          

HSP 2 Score: 115.546 bits (288), Expect = 7.216e-55
Identity = 56/95 (58.95%), Postives = 74/95 (77.89%), Query Frame = 3
Query:    9 IALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 293
            +ALK+IRLE E EG P TAIRE+SLLK+++H NIV L D++H+EK L LVFEYLD DLK+++D C +  N    +K FL+Q+LRG+AYCH  +VL
Sbjct:  191 VALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIIN-MHNVKLFLFQLLRGLAYCHRQKVL 283          
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: CDK16_MOUSE (Cell division protein kinase 16 OS=Mus musculus GN=Cdk16 PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 9.407e-55
Identity = 57/89 (64.04%), Postives = 69/89 (77.53%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMVNQRPLFPGNSEIDEL 559
            HRDLKPQN LI+ R   LKLADFGLARA  IP +T+++EVVTLWYR P+ILLGS  YS  +D+W VGCIF EM   RPLFPG++  ++L
Sbjct:  284 HRDLKPQNLLINER-GELKLADFGLARAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQL 371          

HSP 2 Score: 115.161 bits (287), Expect = 9.407e-55
Identity = 56/95 (58.95%), Postives = 74/95 (77.89%), Query Frame = 3
Query:    9 IALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 293
            +ALK+IRLE E EG P TAIRE+SLLK+++H NIV L D++H+EK L LVFEYLD DLK+++D C +  N    +K FL+Q+LRG+AYCH  +VL
Sbjct:  191 VALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNVIN-MHNVKLFLFQLLRGLAYCHRQKVL 283          
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: CC2H1_TRYBB (Cell division control protein 2 homolog 1 OS=Trypanosoma brucei brucei GN=CRK1 PE=3 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 9.452e-55
Identity = 61/92 (66.30%), Postives = 70/92 (76.09%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMVNQRPLFPGNSEIDELFKI 568
            HRDLKP N LI R    LKLADFGL RAFGIPV+ FT EVVTLWYR+P++LLGS  Y  PVD+WSVGCIFAEM    PLF G ++ D+L +I
Sbjct:  125 HRDLKPPNLLISREKE-LKLADFGLGRAFGIPVKKFTQEVVTLWYRSPDVLLGSTQYGTPVDIWSVGCIFAEMAIGAPLFTGKNDADQLLRI 215          

HSP 2 Score: 105.531 bits (262), Expect = 9.452e-55
Identity = 53/95 (55.79%), Postives = 71/95 (74.74%), Query Frame = 3
Query:    9 IALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 293
            +A+K+IRLE+E+EGVP TAIREIS+LKE++H NIVRL DV HSEK+L LVFE +++DLKK+MD       D   I+ F+  +L G+ +CH   VL
Sbjct:   31 VAVKRIRLEKEEEGVPCTAIREISILKELRHENIVRLLDVCHSEKRLTLVFECMEMDLKKYMDHVGGDL-DAGTIQEFMRSLLSGVRFCHERNVL 124          
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: PHO85_KLULA (Negative regulator of the PHO system OS=Kluyveromyces lactis GN=PHO85 PE=3 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 3.558e-54
Identity = 58/89 (65.17%), Postives = 73/89 (82.02%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMVNQRPLFPGNSEIDEL 559
            HRDLKPQN LI+ R   LKL DFGLARAFGIPV TF+ EVVTLWYRAP++L+GSR+Y   +D+WS GCI AEM+  +PLFPG+++ ++L
Sbjct:  131 HRDLKPQNLLINNR-GQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRNYCTSIDIWSCGCILAEMIMGKPLFPGSNDEEQL 218          

HSP 2 Score: 104.76 bits (260), Expect = 3.558e-54
Identity = 54/100 (54.00%), Postives = 77/100 (77.00%), Query Frame = 3
Query:    9 IALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPR-----LIKTFLYQILRGIAYCHSHRVL 293
            +ALK+++L+ E EG PSTAIREISL+KE++H NIVRL DV+H+E KL LVFE++D DLKK MD+  +  N  +     L+K F +Q+L+G+A+CH +R+L
Sbjct:   33 VALKEVKLDSE-EGTPSTAIREISLMKELKHDNIVRLFDVIHTENKLTLVFEFMDNDLKKFMDN-RNKGNSHKGLEMDLVKYFQWQLLQGVAFCHENRIL 130          
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: CDK16_RAT (Cell division protein kinase 16 OS=Rattus norvegicus GN=Cdk16 PE=1 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 6.019e-54
Identity = 56/89 (62.92%), Postives = 68/89 (76.40%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMVNQRPLFPGNSEIDEL 559
            HRDLKPQN LI+ R   LKLADFGLA A  IP +T+++EVVTLWYR P+ILLGS  YS  +D+W VGCIF EM   RPLFPG++  ++L
Sbjct:  284 HRDLKPQNLLINER-GELKLADFGLAYAKSIPTKTYSNEVVTLWYRPPDILLGSTDYSGQIDMWGVGCIFYEMATGRPLFPGSTVEEQL 371          

HSP 2 Score: 115.161 bits (287), Expect = 6.019e-54
Identity = 56/95 (58.95%), Postives = 74/95 (77.89%), Query Frame = 3
Query:    9 IALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 293
            +ALK+IRLE E EG P TAIRE+SLLK+++H NIV L D++H+EK L LVFEYLD DLK+++D C +  N    +K FL+Q+LRG+AYCH  +VL
Sbjct:  191 VALKEIRLEHE-EGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNVIN-MHNVKLFLFQLLRGLAYCHRQKVL 283          
BLAST of CX675489 vs. ExPASy Swiss-Prot
Match: CC2H3_TRYBB (Cell division control protein 2 homolog 3 OS=Trypanosoma brucei brucei GN=CRK3 PE=3 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 7.881e-54
Identity = 60/92 (65.22%), Postives = 75/92 (81.52%), Query Frame = 2
Query:  293 HRDLKPQNWLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSAPVDVWSVGCIFAEMVNQRPLFPGNSEIDELFKI 568
            HRDLKP N L+    N++K+ADFGLARAF IP+ T+THEVVTLWYRAPEILLG +HY+  VD+WS+GCIFAE+   + LF G+SEI +LF+I
Sbjct:  143 HRDLKPANILVTT-DNSVKIADFGLARAFQIPMHTYTHEVVTLWYRAPEILLGEKHYTPAVDMWSIGCIFAELARGKVLFRGDSEIGQLFEI 233          

HSP 2 Score: 102.064 bits (253), Expect = 7.881e-54
Identity = 46/97 (47.42%), Postives = 72/97 (74.23%), Query Frame = 3
Query:    3 ETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKKLYLVFEYLDLDLKKHMDSCPDFANDPRLIKTFLYQILRGIAYCHSHRVL 293
            + +ALKK+RL++ DEG+P TA+RE+S+L+E+ H NIV L DV+ ++ KLYL+FEY+D DLKK ++     A     +K  +YQ+L G+++CH HR++
Sbjct:   47 QIVALKKVRLDRTDEGIPQTALREVSILQEIHHPNIVNLLDVICADGKLYLIFEYVDHDLKKALEK-RGGAFTGTTLKKIIYQLLEGLSFCHRHRIV 142          
The following BLAST results are available for this feature:
BLAST of CX675489 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDK17_RAT6.631e-5663.04Cell division protein kinase 17 OS=Rattus norvegic... [more]
CDK17_HUMAN1.127e-5561.96Cell division protein kinase 17 OS=Homo sapiens GN... [more]
CDK5_DROME1.133e-5560.22Cell division protein kinase 5 homolog OS=Drosophi... [more]
PEF1_SCHPO4.268e-5568.48Serine/threonine-protein kinase pef1 OS=Schizosacc... [more]
CDK16_HUMAN7.216e-5564.04Cell division protein kinase 16 OS=Homo sapiens GN... [more]
CDK16_MOUSE9.407e-5564.04Cell division protein kinase 16 OS=Mus musculus GN... [more]
CC2H1_TRYBB9.452e-5566.30Cell division control protein 2 homolog 1 OS=Trypa... [more]
PHO85_KLULA3.558e-5465.17Negative regulator of the PHO system OS=Kluyveromy... [more]
CDK16_RAT6.019e-5462.92Cell division protein kinase 16 OS=Rattus norvegic... [more]
CC2H3_TRYBB7.881e-5465.22Cell division control protein 2 homolog 3 OS=Trypa... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS08_62E12_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62E12-J24-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675489 ID=CX675489; Name=CX675489; organism=Citrus sinensis; type=EST; length=569bp
ATGAGACAATAGCATTGAAGAAGATCCGCCTTGAGCAGGAAGATGAAGGT
GTGCCTAGCACCGCAATTAGAGAAATTTCCCTCTTGAAAGAAATGCAGCA
TGGGAACATTGTTAGGTTGCAAGATGTAGTGCATAGCGAGAAGAAACTTT
ATCTGGTTTTCGAGTATTTGGACTTGGATTTGAAGAAGCACATGGATTCT
TGCCCAGATTTTGCTAATGATCCGCGTCTGATAAAAACATTCCTTTATCA
AATTCTACGTGGCATTGCCTACTGCCATTCTCACCGGGTTCTCATCGAGA
TTTGAAACCACAAAATTGGCTGATAGATCGTCGTACGAATGCACTAAAGC
TAGCAGATTTTGGACTGGCCAGGGCTTTTGGTATTCCTGTTAGGACATTT
ACACATGAGGTGGTGACATTGTGGTACAGAGCACCTGAAATATTACTAGG
ATCTCGCCATTACTCTGCTCCGGTTGATGTGTGGTCGGTGGGATGTATAT
TTGCTGAGATGGTGAACCAGCGGCCATTGTTTCCAGGAAACTCTGAGATT
GATGAGTTATTCAAGATCT
back to top