CK938395
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA_CLOB1 (V-type ATP synthase alpha chain OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=atpA PE=3 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 1.237e-32 Identity = 73/146 (50.00%), Postives = 96/146 (65.75%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 437 GGD S+PVT ATL IV+VFWGLD +LA R+HFP++NWL SYS Y + + E D+ +R KA +LQ E L EIV+LVG DAL+E D++ LE AK LREDYL QNAF D + K M++ ++ FY+ A +A+ G Sbjct: 393 GGDLSEPVTQATLRIVKVFWGLDAQLAYRRHFPAINWLNSYSLYIEKISPWMDENVASDWTALRIKAMSLLQEEASLEEIVRLVGIDALSEKDRLKLEVAKSLREDYLQQNAFHEVDTYASLGKQYKMLKLVLFFYDEAQRALNAG 538
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA_METVS (V-type ATP synthase alpha chain OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=atpA PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.616e-32 Identity = 75/168 (44.64%), Postives = 110/168 (65.48%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFY 503 GGDFS+PVTS TL IV+VFW LD LA+R+HFP++NWL SYS Y + ++++ D+ +R +A +LQ+E +L EIVQLVG DAL + +++ LE A++LRED+L Q+A+ D +C K M++ I+ FY A AV KGA D K++ +K + + Y Sbjct: 394 GGDFSEPVTSNTLRIVKVFWALDANLARRRHFPAINWLTSYSLYINDIAGWWKKNTGEDWRVLRDEAMGLLQKEAELQEIVQLVGPDALPDRERVILEIARILREDFLQQDAYHEVDSYCSPKKQYNMLKVIMTFYKKALDAVAKGA--DPAKLSAVSVKGDIARMKY 559
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA_CLOTH (V-type ATP synthase alpha chain OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=atpA PE=3 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.599e-32 Identity = 70/149 (46.98%), Postives = 95/149 (63.76%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGM 446 GGD S+PVT ATL I++VFWGLD LA R+HFP++NWL SYS Y + + E D+ +R+ +LQ E +L EIV+LVG DAL+ D++TLE AK +REDYL QNAF D + K M++ I+ FY +A+E G + Sbjct: 394 GGDLSEPVTQATLRIIKVFWGLDSSLAYRRHFPAINWLQSYSLYLDIIGKWISENISRDWETLRSDTMRILQEEAELEEIVRLVGVDALSPSDRLTLEAAKSIREDYLHQNAFHEVDTYTSLNKQYRMLKLILGFYYSGKKALEAGVSI 542
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA_ARCFU (V-type ATP synthase alpha chain OS=Archaeoglobus fulgidus GN=atpA PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.701e-32 Identity = 82/202 (40.59%), Postives = 116/202 (57.43%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG------AGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDL 587 GGDFS+PVT TL IV+VFW LD KLA R+HFP++NWL SYS Y L+ ++ E ++ +R A EVLQ E +L EIVQLVG DAL E ++ LE A+++RE YL Q A+ P D +C K M++ I + QA+E G AG++G + KFE+ + +PA+ A +K+ ++L Sbjct: 394 GGDFSEPVTQNTLRIVKVFWALDAKLAARRHFPAINWLQSYSLYVDTLKDWFAENVSEEWNELRRWAMEVLQEEANLQEIVQLVGSDALPESQRVLLEVARIIREVYLIQYAYHPVDTYCSVQKQYDMLKAIKQINDWFYQALEAGKTIDEIAGVEGLE---------------EFARAKFEE--DYKPAMEAALEKIRKNL 578
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA_STRPZ (V-type ATP synthase alpha chain OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=atpA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.139e-32 Identity = 72/147 (48.98%), Postives = 98/147 (66.67%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDP-DFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 440 GGD S+PVT TL IV+VFWGLD LAQR+HFP++NWL SYS Y + S+ ++ ++ N T+A +LQRE L EIV+LVG D+L+E D++ + A+ +REDYL QNAF D F F K M+ NI+ F A++A+ GA Sbjct: 395 GGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYQDDVGSYIDRKQQSNWSNKVTRAMAILQREASLEEIVRLVGLDSLSEQDRLIMAVARQIREDYLQQNAFDSVDTFTSFPKQEAMLTNILTFNEEASKALSLGA 541
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA_NATPD (V-type ATP synthase alpha chain OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=atpA PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 6.139e-32 Identity = 72/150 (48.00%), Postives = 98/150 (65.33%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMD 449 GGDFS+PVT TL IV+ FW LD LA+R+HFPS+NW SYS Y L+ ++ E +F +R A +VL ED+L EIVQLVGKDAL E ++TLE A+ +RE +L QNAF D +C K+ M+ I HF + A +A++ G ++ Sbjct: 397 GGDFSEPVTQNTLRIVKCFWALDADLAERRHFPSINWNESYSLYKEQLDPWWRENVHEEFPEVRQWAVDVLDEEDELQEIVQLVGKDALPEDQQLTLEVARYIREAWLQQNAFHDVDTYCEPEKTYQMLTAIQHFNDEAFEALDAGVPVE 546
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA_THEVO (V-type ATP synthase alpha chain OS=Thermoplasma volcanium GN=atpA PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 8.018e-32 Identity = 65/150 (43.33%), Postives = 98/150 (65.33%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMD 449 GGD S+PV+ TL + +VFW LD LA R+HFPS+NWL SYS Y+ L +Y E D+ ++R++A ++LQRE +L E+ QLVG DA+ E +K L+ A+++RED+L Q+AF D +C K M++ I+ + + A++ G MD Sbjct: 577 GGDISEPVSQNTLRVTRVFWALDASLANRRHFPSINWLNSYSLYTEDLRHWYDENVAKDWGSLRSQAMDILQRESELQEVAQLVGYDAMPEKEKSILDVARIIREDFLQQSAFDEIDSYCSLRKQYLMLKAIMELNSYQSMAIDHGVTMD 726
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA3_METHJ (V-type ATP synthase alpha chain 3 OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=atpA3 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 8.018e-32 Identity = 68/146 (46.58%), Postives = 99/146 (67.81%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 437 GGDFS+PVT TL IV+VFW LD LA ++HFP++NWL+SYS YS ++E+ P+FI ++ + E+LQRE++L EI++LVG + L E D++ L A++LRE YL Q AF +D F K M++ I F++ A +A+E G Sbjct: 396 GGDFSEPVTQNTLRIVKVFWALDADLAYQRHFPAINWLMSYSLYSPIAGIWWEEHIGPEFIRMKQEMMEILQRENELEEIIRLVGPETLPESDRLLLLKAEILRESYLMQYAFDEFDTFTGPKKQYRMLKAIFTFFSQAERALETG 541
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA_THEP3 (V-type ATP synthase alpha chain OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=atpA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 1.047e-31 Identity = 69/146 (47.26%), Postives = 97/146 (66.44%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 437 GGD S+PVT ATL +V+VFW LD +LA +HFP++NWL SYS YS +E + + D+ +R++A +LQ E L EIV+LVG DAL+ D++ LE A+ +RED+L QNAF D + K M++ I+ FY A +A+EKG Sbjct: 394 GGDLSEPVTQATLRVVKVFWALDSELAYARHFPAINWLTSYSLYSDVVEDYMNKNVSSDWGELRSEAMRLLQEEASLQEIVRLVGIDALSTRDRLVLEVARSIREDFLHQNAFHEVDTYSSMEKQYRMLKLIMIFYQEAQKALEKG 539
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA_AERPE (V-type ATP synthase alpha chain OS=Aeropyrum pernix GN=atpA PE=3 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 1.047e-31 Identity = 76/205 (37.07%), Postives = 118/205 (57.56%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKY-STALESFYEQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRALED 614 GGDFS+PVTS T ++VFW LD KLA +H+P++NWL+SYS Y + ++E D + R +A ++L RE +L EIV+LVG + L E DK+ LETA+L+++ +L QNAF P D F K +++ I+ + + + +EKG +T I LG L+ +V KF P + + +K+ E +AL++ Sbjct: 403 GGDFSEPVTSHTTRFIRVFWALDTKLAYSRHYPAINWLMSYSAYVDLVTQWWHENVDKRWREYRDEAMDILLRESELQEIVRLVGTEGLDEKDKMVLETARLIKDGFLKQNAFDPIDAFATPQKQFRLLKMIMDIHRKSLELIEKG-------VTTQQILQALGRLYIDIVKAKFTIPND-------QLEKIDEIRDRALKALDE 593 The following BLAST results are available for this feature:
BLAST of CK938395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 166
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938395 ID=CK938395; Name=CK938395; organism=Citrus sinensis; type=EST; length=787bpback to top |