CK938395
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA_METST (V-type ATP synthase alpha chain OS=Methanosphaera stadtmanae (strain DSM 3091) GN=atpA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 5.022e-34 Identity = 79/180 (43.89%), Postives = 113/180 (62.78%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYE-QFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAE 539 GGD S+PVT TL I +VFW LD LA R+HFPS+NWL SYS Y ++ +++ Q D+ ++R A +LQ+E +LNEIVQLVG DAL + D++TLE+A++LRED+L QNAF D +C K M++ I+ + A A+ GA D K+ ++ LG + Y + +FE E Sbjct: 394 GGDLSEPVTQNTLRIAKVFWALDASLADRRHFPSINWLNSYSLYVDSITNWWNSQIGSDWRDLRNTAMALLQKESELNEIVQLVGPDALPQKDRVTLESARMLREDFLQQNAFDDTDTYCSPSKQYNMLKTILLYNTTAQSALADGA--DINKLVNLDVRVDLGKMKY-IPEDEFEAKVE 570
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA_METBF (V-type ATP synthase alpha chain OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=atpA PE=3 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 8.567e-34 Identity = 69/146 (47.26%), Postives = 102/146 (69.86%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 437 GGDFS+PVT TL IV+VFW LD KL+QR+HFP++NWL SYS Y +L ++ + PD++ +R +A E+LQ E +L EIVQLVG DAL + ++ LE ++LRE +L QNAF P D + PF + +++ I+ + + A +A++ G Sbjct: 388 GGDFSEPVTQNTLRIVKVFWALDAKLSQRRHFPAINWLNSYSLYKDSLNDWFADNVAPDYVPLRERAMEMLQTESELQEIVQLVGSDALPDDQQLLLEITRMLREIFLQQNAFHPVDAYSPFAQQYRILKAIMKWGDAAMEALKSG 533
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA_THESM (V-type ATP synthase alpha chain OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=atpA PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.119e-33 Identity = 79/196 (40.31%), Postives = 121/196 (61.73%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDL 587 GGD SDPV TL +V+VFW LD LA+R+HFP++NWL SYS Y +++ +++ DP++ +R +A +LQ+E +L EIV++VG DAL E +K L A++LREDYL Q+AF D +C K V MMR I++FY +A++ AG+ ++I ++ +G + K+ E L+ K K+ E+L Sbjct: 393 GGDLSDPVVQNTLRVVKVFWALDADLARRRHFPAINWLTSYSLYVDSIKDWWQNNVDPEWKAMRDEAMALLQKESELEEIVRIVGPDALPEREKAILLVARMLREDYLQQDAFHEVDTYCLPKKQVTMMRVILNFYRHTMRAID--AGIPVEEIAKLPVREEIGRM-------KYNPNIEEIAVLMEKTKEQFEEL 579
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA_STRZJ (V-type ATP synthase alpha chain OS=Streptococcus pneumoniae (strain JJA) GN=atpA PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.461e-33 Identity = 73/147 (49.66%), Postives = 100/147 (68.03%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIR-TKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 440 GGD S+PVT TL IV+VFWGLD LAQR+HFP++NWL SYS Y ++ ++ + + N + T+A LQRE L EIV+LVG D+L++ +++T+E AK +REDYL QNAF D F F K M+ NI+ F + AN A+E G+ Sbjct: 395 GGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYKDSVGTYIDGKEKTDWNSKITRAMNYLQRESSLEEIVRLVGIDSLSDNERLTMEIAKQIREDYLQQNAFDSVDTFTSFAKQEAMLSNILTFADQANHALELGS 541
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA_STRPN (V-type ATP synthase alpha chain OS=Streptococcus pneumoniae GN=atpA PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.461e-33 Identity = 73/147 (49.66%), Postives = 100/147 (68.03%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIR-TKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 440 GGD S+PVT TL IV+VFWGLD LAQR+HFP++NWL SYS Y ++ ++ + + N + T+A LQRE L EIV+LVG D+L++ +++T+E AK +REDYL QNAF D F F K M+ NI+ F + AN A+E G+ Sbjct: 395 GGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYKDSVGTYIDGKEKTDWNSKITRAMNYLQRESSLEEIVRLVGIDSLSDNERLTMEIAKQIREDYLQQNAFDSVDTFTSFAKQEAMLSNILTFADQANHALELGS 541
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA_STRPJ (V-type ATP synthase alpha chain OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=atpA PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.461e-33 Identity = 73/147 (49.66%), Postives = 100/147 (68.03%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIR-TKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 440 GGD S+PVT TL IV+VFWGLD LAQR+HFP++NWL SYS Y ++ ++ + + N + T+A LQRE L EIV+LVG D+L++ +++T+E AK +REDYL QNAF D F F K M+ NI+ F + AN A+E G+ Sbjct: 395 GGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYKDSVGTYIDGKEKTDWNSKITRAMNYLQRESSLEEIVRLVGIDSLSDNERLTMEIAKQIREDYLQQNAFDSVDTFTSFAKQEAMLSNILTFADQANHALELGS 541
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA_STRP4 (V-type ATP synthase alpha chain OS=Streptococcus pneumoniae serotype 19F (strain G54) GN=atpA PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.461e-33 Identity = 73/147 (49.66%), Postives = 100/147 (68.03%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDPDFINIR-TKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 440 GGD S+PVT TL IV+VFWGLD LAQR+HFP++NWL SYS Y ++ ++ + + N + T+A LQRE L EIV+LVG D+L++ +++T+E AK +REDYL QNAF D F F K M+ NI+ F + AN A+E G+ Sbjct: 395 GGDISEPVTQNTLRIVKVFWGLDAPLAQRRHFPAINWLTSYSLYKDSVGTYIDGKEKTDWNSKITRAMNYLQRESSLEEIVRLVGIDSLSDNERLTMEIAKQIREDYLQQNAFDSVDTFTSFAKQEAMLSNILTFADQANHALELGS 541
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA_METTH (V-type ATP synthase alpha chain OS=Methanobacterium thermoautotrophicum GN=atpA PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.461e-33 Identity = 71/147 (48.30%), Postives = 100/147 (68.03%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 440 GGD S+PVT TL I +VFW LD LA ++HFPS++WL SYS Y +++ ++ DP++ R +A +LQ+E +L EIVQLVG DAL + ++ITLET +++RED+L QNA+ D +C K M+R II F+ A A+EKGA Sbjct: 395 GGDLSEPVTQNTLRICKVFWALDASLADKRHFPSIDWLQSYSLYIDSVQEWWASNVDPEWRKFRDEAMALLQKEAELQEIVQLVGPDALPDRERITLETTRMIREDFLQQNAYHEVDTYCSPSKQFEMLRTIIMFHRNATAALEKGA 541
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA_METM7 (V-type ATP synthase alpha chain OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=atpA PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.461e-33 Identity = 78/175 (44.57%), Postives = 114/175 (65.14%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDP-DFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKF 524 GGDFS+PVTS TL IV+VFW LD LA+R+HFP++NWL SYS Y + +++Q D+ ++R +A +LQ+E +L EIVQLVG DAL + +++ LE A++LRED+L Q+A+ D +C K M++ I+ FY AV KGA D I+ +K + + Y LV ++F Sbjct: 394 GGDFSEPVTSNTLRIVKVFWALDANLARRRHFPAINWLTSYSLYIDDIAGWWQQNTAADWRSLRDEAMSLLQKEAELQEIVQLVGPDALPDRERVILEIARMLREDFLQQDAYHEVDSYCSPIKQYHMLKIIMTFYKKGLDAVAKGA--DPAGISAVTVKGDIARMKY-LVEEEF 565
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: NTPA_ENTHR (V-type sodium ATPase catalytic subunit A OS=Enterococcus hirae GN=ntpA PE=1 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.461e-33 Identity = 72/147 (48.98%), Postives = 100/147 (68.03%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQ-FDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGA 440 GGD S+PVT TL +V+VFWGLD LAQ++HFPS+NW+ SYS YST + + +Q D+ ++ T+ +LQ E+ LNEIV+LVG D+L++ D++TLE AK +REDYL QNAF D F K M++ I+ F A +A+ GA Sbjct: 394 GGDISEPVTQNTLRVVKVFWGLDSSLAQKRHFPSINWIQSYSLYSTEVGRYMDQILQQDWSDMVTEGMRILQEEEQLNEIVRLVGIDSLSDNDRLTLEVAKSIREDYLQQNAFDDVDTFTSREKQFNMLKVILTFGKEARKALSLGA 540 The following BLAST results are available for this feature:
BLAST of CK938395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 166
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938395 ID=CK938395; Name=CK938395; organism=Citrus sinensis; type=EST; length=787bpback to top |