CK938395
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA_METBA (V-type ATP synthase alpha chain OS=Methanosarcina barkeri GN=atpA PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.909e-33 Identity = 69/146 (47.26%), Postives = 101/146 (69.18%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 437 GGDFS+PVT TL IV+VFW LD KL+QR+HFP++NWL SYS Y +L ++ + PD++ +R +A E+LQ E +L EIVQLVG DAL + ++ LE ++LRE +L QNAF P D + PF + +++ I+ + + A A++ G Sbjct: 388 GGDFSEPVTQNTLRIVKVFWALDAKLSQRRHFPAINWLNSYSLYKDSLNDWFADNVAPDYVPLRERAMEMLQTESELQEIVQLVGSDALPDDQQLLLEITRMLREIFLQQNAFHPVDAYSPFDQQYKILKAIMKWGDAAMDALKSG 533
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA1_CLOTE (V-type ATP synthase alpha chain 1 OS=Clostridium tetani GN=atpA1 PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.909e-33 Identity = 73/146 (50.00%), Postives = 98/146 (67.12%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKG 437 GGD S+PVT ATL IV+VFWGLD +LA R+HFP++NWL SYS Y + + E D++ +R KA +LQ E +L EI +LVG DAL+E D++ LE AK LREDYL QNAF D + P K M++ ++ F + A +A+E G Sbjct: 395 GGDLSEPVTQATLRIVKVFWGLDSQLAYRRHFPAINWLNSYSLYLDKVGPWMNENVAEDWVELRQKAMALLQEEANLQEIARLVGIDALSEEDRLKLEVAKSLREDYLQQNAFHDVDTYAPLNKQYRMLKAVLQFGDEARKALESG 540
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA_THET2 (V-type ATP synthase alpha chain OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) GN=atpA PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.493e-33 Identity = 82/203 (40.39%), Postives = 123/203 (60.59%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRAL 608 GGD S+PVT +TL IV FW LD LA R+HFP++NW SYS +++AL+ +Y E D+ +R E+LQRE L EIVQLVG DAL + +++ +E +++RED+L QNAF D +C K+ +M+ I+ FY A A+++G +D +I + R+G R VS++ E PA E A+ +++ F+AL Sbjct: 388 GGDMSEPVTQSTLRIVGAFWRLDASLAFRRHFPAINWNGSYSLFTSALDPWYRENVAEDYPELRDAISELLQREAGLQEIVQLVGPDALQDAERLVIEVGRIIREDFLQQNAFHEVDAYCSMRKAYGIMKMILAFYKEAEAAIKRGVSID--EILQLPVVERIGRA--RYVSEE-EFPAYFEEAM--------KEIQGAFKAL 577
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA_METM6 (V-type ATP synthase alpha chain OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=atpA PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.493e-33 Identity = 78/175 (44.57%), Postives = 113/175 (64.57%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDP-DFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKF 524 GGDFS+PVTS TL IV+VFW LD LA+R+HFP++NWL SYS Y + +++Q D+ ++R +A +LQ+E +L EIVQLVG DAL + +++ LE A++LRED+L Q+A+ D +C K M++ I+ FY AV KGA D I+ +K + + Y LV +F Sbjct: 394 GGDFSEPVTSNTLRIVKVFWALDANLARRRHFPAINWLTSYSLYIDDIAGWWQQNTAADWRSLRDEAMSLLQKEAELQEIVQLVGPDALPDRERVILEIARMLREDFLQQDAYHEVDSYCSPIKQYHMLKIIMTFYKKGLDAVAKGA--DPAGISAVTVKGDIARMKY-LVEDEF 565
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA_METLZ (V-type ATP synthase alpha chain OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=atpA PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.493e-33 Identity = 75/163 (46.01%), Postives = 106/163 (65.03%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRL 488 GGDFS+PVT TL IV+VFW LD L++R+HFP++NWL SYS Y L +Y E+ PD+ +R+ EVLQ+E +L EIVQLVG DAL E ++IT+E A+++RE +L QN F P D +C K + M + I + +LA A + AG+ +I K+ + Sbjct: 392 GGDFSEPVTQNTLRIVKVFWALDANLSRRRHFPAINWLQSYSLYMAQLNDYYDEKVSPDWNKLRSWFMEVLQKEAELQEIVQLVGSDALPETEQITIEVARMMRELFLQQNGFDPVDTYCDLPKQLDMFKMIRTYADLAYAA--QAAGVPPSQILAVKAKNEM 552
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA_CLOPS (V-type ATP synthase alpha chain OS=Clostridium perfringens (strain SM101 / Type A) GN=atpA PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.493e-33 Identity = 77/153 (50.33%), Postives = 101/153 (66.01%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDP----DFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMD 449 GGD S+PVT +TL IV+VFWGLD +LA ++HFPS+NWL SYS Y LE E D D+ +RT+A +LQ E +L EIV+LVG DAL+EGD++ LE AK +REDYL QNAF D + K M+ I+ F + A +A+E G +D Sbjct: 394 GGDISEPVTQSTLRIVKVFWGLDAQLAYKRHFPSINWLTSYSLY---LEKMGEWMDAHVADDWSALRTEAMALLQEEANLEEIVRLVGMDALSEGDRLKLEVAKSIREDYLQQNAFHENDTYTSLNKQYKMLNLILSFRHEAEKALEAGVYLD 543
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA_CLOPE (V-type ATP synthase alpha chain OS=Clostridium perfringens GN=atpA PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.493e-33 Identity = 77/153 (50.33%), Postives = 101/153 (66.01%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDP----DFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMD 449 GGD S+PVT +TL IV+VFWGLD +LA ++HFPS+NWL SYS Y LE E D D+ +RT+A +LQ E +L EIV+LVG DAL+EGD++ LE AK +REDYL QNAF D + K M+ I+ F + A +A+E G +D Sbjct: 394 GGDISEPVTQSTLRIVKVFWGLDAQLAYKRHFPSINWLTSYSLY---LEKMGEWMDAHVADDWSALRTEAMALLQEEANLEEIVRLVGMDALSEGDRLKLEVAKSIREDYLQQNAFHENDTYTSLNKQYKMLNLILSFKHEAEKALEAGVYLD 543
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA_CLOP1 (V-type ATP synthase alpha chain OS=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) GN=atpA PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.493e-33 Identity = 77/153 (50.33%), Postives = 101/153 (66.01%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFYEQFDP----DFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMD 449 GGD S+PVT +TL IV+VFWGLD +LA ++HFPS+NWL SYS Y LE E D D+ +RT+A +LQ E +L EIV+LVG DAL+EGD++ LE AK +REDYL QNAF D + K M+ I+ F + A +A+E G +D Sbjct: 394 GGDISEPVTQSTLRIVKVFWGLDAQLAYKRHFPSINWLTSYSLY---LEKMGEWMDAHVADDWSALRTEAMALLQEEANLEEIVRLVGMDALSEGDRLKLEVAKSIREDYLQQNAFHENDTYTSLNKQYKMLNLILSFKHEAEKALEAGVYLD 543
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA2_METHJ (V-type ATP synthase alpha chain 2 OS=Methanospirillum hungatei (strain JF-1 / DSM 864) GN=atpA2 PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.493e-33 Identity = 68/145 (46.90%), Postives = 97/145 (66.90%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEK 434 GGDFS+P+T TL I FW LD LA R+H+PSVNW+ SYS Y +E ++ E+ D+ R +A +LQ+E +L EIVQLVG DAL + +K+ LE AK++RED+L Q+A++ D FCP K WM++ II +Y+ A+ + Sbjct: 389 GGDFSEPITQNTLRIAGTFWALDANLAYRRHYPSVNWIRSYSLYLEDVEDWFSEKVARDWYQFRGRAMYILQKEVELQEIVQLVGPDALPDKEKVVLEIAKIIREDFLQQSAYSDDDSFCPLEKQYWMLKIIIWYYDAIRAAMRR 533
BLAST of CK938395 vs. ExPASy Swiss-Prot
Match: VATA_THET8 (V-type ATP synthase alpha chain OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=atpA PE=1 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 5.553e-33 Identity = 81/203 (39.90%), Postives = 123/203 (60.59%), Query Frame = 3 Query: 3 GGDFSDPVTSATLSIVQVFWGLDKKLAQRKHFPSVNWLISYSKYSTALESFY-EQFDPDFINIRTKAREVLQREDDLNEIVQLVGKDALAEGDKITLETAKLLREDYLAQNAFTPYDKFCPFYKSVWMMRNIIHFYNLANQAVEKGAGMDGQKITYTLIKHRLGDLFYRLVSQKFEDPAEGEPALVAKFKKLHEDLTAGFRAL 608 GGD S+PVT +TL IV FW LD LA R+HFP++NW SYS +++AL+ +Y E D+ +R E+LQRE L EIVQLVG DAL + +++ +E +++RED+L QNA+ D +C K+ +M+ I+ FY A A+++G +D +I + R+G R VS++ E PA E A+ +++ F+AL Sbjct: 388 GGDMSEPVTQSTLRIVGAFWRLDASLAFRRHFPAINWNGSYSLFTSALDPWYRENVAEDYPELRDAISELLQREAGLQEIVQLVGPDALQDAERLVIEVGRIIREDFLQQNAYHEVDAYCSMKKAYGIMKMILAFYKEAEAAIKRGVSID--EILQLPVLERIGRA--RYVSEE-EFPAYFEEAM--------KEIQGAFKAL 577 The following BLAST results are available for this feature:
BLAST of CK938395 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 166
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938395 ID=CK938395; Name=CK938395; organism=Citrus sinensis; type=EST; length=787bpback to top |