CK938381

Overview
NameCK938381
Unique NameCK938381
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length751
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938381 vs. ExPASy Swiss-Prot
Match: RAB2A_DICDI (Ras-related protein Rab-2A OS=Dictyostelium discoideum GN=rab2A PE=2 SV=2)

HSP 1 Score: 186.422 bits (472), Expect = 1.408e-46
Identity = 93/207 (44.93%), Postives = 130/207 (62.80%), Query Frame = 1
Query:   55 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETPALEATNVDNAFAEVLTQIYRIVSKKAMETGEDGGNSAVPSKGEKIDVSKDVSAVKKGGCC 675
            Y +LFK ++IGD+GVGKS LL +FT   F      TIGVEF  R + +D K IK QIWDTAGQE +R+IT +YYRG+ GALLVYD+TR  TF ++  WL++ R + + N+ ++LIGNKSD+    AVS E+G+ FA++  L F+ET A  A+NV+ AF    ++IY  + K   +   +     + +   K D +    A   GGCC
Sbjct:    2 YSFLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKAIKLQIWDTAGQESFRSITRSYYRGSAGALLVYDITRRDTFNHLTCWLKDARSYANSNMTIILIGNKSDMESKRAVSYEEGRQFADENGLIFLETSAKTASNVEEAFVNTASKIYEKIQKGDFDINNESFGIKLGAPTSKQDGTDQKPA--GGGCC 206          
BLAST of CK938381 vs. ExPASy Swiss-Prot
Match: RAB14_RAT (Ras-related protein Rab-14 OS=Rattus norvegicus GN=Rab14 PE=2 SV=3)

HSP 1 Score: 186.422 bits (472), Expect = 1.408e-46
Identity = 94/209 (44.98%), Postives = 136/209 (65.07%), Query Frame = 1
Query:   52 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETPALEATNVDNAFAEVLTQIYRIVSKKAME-TGEDGGNSAVPSKGEKIDVSKDVSAVKKG-GC 672
            +Y Y+FK ++IGD GVGKS LL +FT  +F  +   TIGVEF TR + V G+ IK QIWDTAGQER+RA+T +YYRGA GAL+VYD+TR ST+ ++  WL + R+ T+PN V++LIGNK+DL     V+ E+ K FAE+  L F+E  A    NV++AF E   +IY+ +   +++    + G    PS  +   ++ +    ++G GC
Sbjct:    7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESGVQHKPSAPQGGRLTSEPQPQREGCGC 215          
BLAST of CK938381 vs. ExPASy Swiss-Prot
Match: RAB14_PONAB (Ras-related protein Rab-14 OS=Pongo abelii GN=RAB14 PE=2 SV=3)

HSP 1 Score: 186.422 bits (472), Expect = 1.408e-46
Identity = 94/209 (44.98%), Postives = 136/209 (65.07%), Query Frame = 1
Query:   52 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETPALEATNVDNAFAEVLTQIYRIVSKKAME-TGEDGGNSAVPSKGEKIDVSKDVSAVKKG-GC 672
            +Y Y+FK ++IGD GVGKS LL +FT  +F  +   TIGVEF TR + V G+ IK QIWDTAGQER+RA+T +YYRGA GAL+VYD+TR ST+ ++  WL + R+ T+PN V++LIGNK+DL     V+ E+ K FAE+  L F+E  A    NV++AF E   +IY+ +   +++    + G    PS  +   ++ +    ++G GC
Sbjct:    7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESGVQHKPSAPQGGRLTSEPQPQREGCGC 215          
BLAST of CK938381 vs. ExPASy Swiss-Prot
Match: RAB14_PIG (Ras-related protein Rab-14 OS=Sus scrofa GN=RAB14 PE=2 SV=3)

HSP 1 Score: 186.422 bits (472), Expect = 1.408e-46
Identity = 94/209 (44.98%), Postives = 136/209 (65.07%), Query Frame = 1
Query:   52 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETPALEATNVDNAFAEVLTQIYRIVSKKAME-TGEDGGNSAVPSKGEKIDVSKDVSAVKKG-GC 672
            +Y Y+FK ++IGD GVGKS LL +FT  +F  +   TIGVEF TR + V G+ IK QIWDTAGQER+RA+T +YYRGA GAL+VYD+TR ST+ ++  WL + R+ T+PN V++LIGNK+DL     V+ E+ K FAE+  L F+E  A    NV++AF E   +IY+ +   +++    + G    PS  +   ++ +    ++G GC
Sbjct:    7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESGVQHKPSAPQGGRLTSEPQPQREGCGC 215          
BLAST of CK938381 vs. ExPASy Swiss-Prot
Match: RAB14_MOUSE (Ras-related protein Rab-14 OS=Mus musculus GN=Rab14 PE=1 SV=3)

HSP 1 Score: 186.422 bits (472), Expect = 1.408e-46
Identity = 94/209 (44.98%), Postives = 136/209 (65.07%), Query Frame = 1
Query:   52 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETPALEATNVDNAFAEVLTQIYRIVSKKAME-TGEDGGNSAVPSKGEKIDVSKDVSAVKKG-GC 672
            +Y Y+FK ++IGD GVGKS LL +FT  +F  +   TIGVEF TR + V G+ IK QIWDTAGQER+RA+T +YYRGA GAL+VYD+TR ST+ ++  WL + R+ T+PN V++LIGNK+DL     V+ E+ K FAE+  L F+E  A    NV++AF E   +IY+ +   +++    + G    PS  +   ++ +    ++G GC
Sbjct:    7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESGVQHKPSAPQGGRLTSEPQPQREGCGC 215          
BLAST of CK938381 vs. ExPASy Swiss-Prot
Match: RAB14_HUMAN (Ras-related protein Rab-14 OS=Homo sapiens GN=RAB14 PE=1 SV=4)

HSP 1 Score: 186.422 bits (472), Expect = 1.408e-46
Identity = 94/209 (44.98%), Postives = 136/209 (65.07%), Query Frame = 1
Query:   52 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETPALEATNVDNAFAEVLTQIYRIVSKKAME-TGEDGGNSAVPSKGEKIDVSKDVSAVKKG-GC 672
            +Y Y+FK ++IGD GVGKS LL +FT  +F  +   TIGVEF TR + V G+ IK QIWDTAGQER+RA+T +YYRGA GAL+VYD+TR ST+ ++  WL + R+ T+PN V++LIGNK+DL     V+ E+ K FAE+  L F+E  A    NV++AF E   +IY+ +   +++    + G    PS  +   ++ +    ++G GC
Sbjct:    7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESGVQHKPSAPQGGRLTSEPQPQREGCGC 215          
BLAST of CK938381 vs. ExPASy Swiss-Prot
Match: RAB14_CHICK (Ras-related protein Rab-14 OS=Gallus gallus GN=RAB14 PE=2 SV=3)

HSP 1 Score: 186.422 bits (472), Expect = 1.408e-46
Identity = 94/209 (44.98%), Postives = 136/209 (65.07%), Query Frame = 1
Query:   52 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETPALEATNVDNAFAEVLTQIYRIVSKKAME-TGEDGGNSAVPSKGEKIDVSKDVSAVKKG-GC 672
            +Y Y+FK ++IGD GVGKS LL +FT  +F  +   TIGVEF TR + V G+ IK QIWDTAGQER+RA+T +YYRGA GAL+VYD+TR ST+ ++  WL + R+ T+PN V++LIGNK+DL     V+ E+ K FAE+  L F+E  A    NV++AF E   +IY+ +   +++    + G    PS  +   ++ +    ++G GC
Sbjct:    7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAAESGVQHKPSAPQGGRLTSEPQPQREGCGC 215          
BLAST of CK938381 vs. ExPASy Swiss-Prot
Match: RAB14_DICDI (Ras-related protein Rab-14 OS=Dictyostelium discoideum GN=rab14 PE=1 SV=2)

HSP 1 Score: 185.267 bits (469), Expect = 3.137e-46
Identity = 92/186 (49.46%), Postives = 127/186 (68.28%), Query Frame = 1
Query:   55 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETPALEATNVDNAFAEVLTQIYRIVSKKAMETGEDGGNSAVP 612
            Y+Y+FK ++IGD GVGKS LL +FT N+F  +S  TIGVEF TR ++V+ K IK QIWDTAGQER+RA+T +YYRGA GALLVYD+TR  T+ ++  WL + R+ T+PN V+MLIGNK DL     V+ E+  +FA++  L F+E+ A    NV+ AF      I++ V +  ++   DGG +  P
Sbjct:    5 YEYIFKYIIIGDMGVGKSCLLHQFTENKFVPDSPHTIGVEFGTRIVDVNNKKIKLQIWDTAGQERFRAVTRSYYRGAAGALLVYDITRRITYNHLTTWLTDARNLTNPNTVIMLIGNKKDLEGQRDVTYEEASAFAKQNGLIFVESSAKTGENVEEAFLRTAKLIFQSVQEGNVDLIPDGGITKNP 190          
BLAST of CK938381 vs. ExPASy Swiss-Prot
Match: RBD2A_ARATH (Ras-related protein RABD2A OS=Arabidopsis thaliana GN=RABD2A PE=1 SV=3)

HSP 1 Score: 184.882 bits (468), Expect = 4.097e-46
Identity = 100/213 (46.95%), Postives = 137/213 (64.32%), Query Frame = 1
Query:   52 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETPALEATNVDNAFAEVLTQIYRIVSKKAMETGEDGGNSAVPS---KGEKIDVSKDVSAVKKGGCCST 681
            +YDYLFK++LIGDSGVGKS LL RF+ + +     STIGV+F  R++  DGK IK QIWDTAGQER+R ITS+YYRGA G ++VYDVT   +F NV++WL E+  +   N+  +L+GNKSDL    A+  E  K+FA++  + FMET A +ATNV+ AF  +   I     K+ M +   G N+  P+   +G+ +         +K GCCST
Sbjct:    4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASI-----KERMASQPAGNNARPPTVQIRGQPV--------AQKNGCCST 203          
BLAST of CK938381 vs. ExPASy Swiss-Prot
Match: RAB1B_BOVIN (Ras-related protein Rab-1B OS=Bos taurus GN=RAB1B PE=2 SV=1)

HSP 1 Score: 182.185 bits (461), Expect = 2.655e-45
Identity = 99/210 (47.14%), Postives = 134/210 (63.81%), Query Frame = 1
Query:   52 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETPALEATNVDNAFAEVLTQIYRIVSKKAMETGEDGGNSAVPSKGEKIDVSKDVSAVKK--GGCC 675
            +YDYLFK++LIGDSGVGKS LL RF  + ++    STIGV+F  R++ +DGK IK QIWDTAGQER+R ITS+YYRGA G ++VYDVT   ++ NV++WL+E+  +   N+  +L+GNKSDL     V     K FA+   + F+ET A  ATNV+ AF  +  +I     KK M  G   G       GE+ ++  D + VK+  GGCC
Sbjct:    4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI-----KKRMGPGAASG-------GERPNLKIDSTPVKQAGGGCC 201          
The following BLAST results are available for this feature:
BLAST of CK938381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RAB2A_DICDI1.408e-4644.93Ras-related protein Rab-2A OS=Dictyostelium discoi... [more]
RAB14_RAT1.408e-4644.98Ras-related protein Rab-14 OS=Rattus norvegicus GN... [more]
RAB14_PONAB1.408e-4644.98Ras-related protein Rab-14 OS=Pongo abelii GN=RAB1... [more]
RAB14_PIG1.408e-4644.98Ras-related protein Rab-14 OS=Sus scrofa GN=RAB14 ... [more]
RAB14_MOUSE1.408e-4644.98Ras-related protein Rab-14 OS=Mus musculus GN=Rab1... [more]
RAB14_HUMAN1.408e-4644.98Ras-related protein Rab-14 OS=Homo sapiens GN=RAB1... [more]
RAB14_CHICK1.408e-4644.98Ras-related protein Rab-14 OS=Gallus gallus GN=RAB... [more]
RAB14_DICDI3.137e-4649.46Ras-related protein Rab-14 OS=Dictyostelium discoi... [more]
RBD2A_ARATH4.097e-4646.95Ras-related protein RABD2A OS=Arabidopsis thaliana... [more]
RAB1B_BOVIN2.655e-4547.14Ras-related protein Rab-1B OS=Bos taurus GN=RAB1B ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004443_E08 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IVF_E08 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938381 ID=CK938381; Name=CK938381; organism=Citrus sinensis; type=EST; length=751bp
GGGGGAAGATATAAGGTTGCAATAGCTATGGCTGGATACAGAGCTGAAGA
TGACTATGATTATCTTTTTAAGGTGGTTTTGATCGGTGACTCCGGTGTCG
GCAAGTCCAATTTGCTTTCTAGGTTCACTAGGAACGAGTTTAGTCTCGAG
TCTAAGTCCACAATAGGTGTTGAGTTCGCTACCCGTAGCTTGAATGTCGA
TGGCAAAGTCATCAAAGCTCAGATTTGGGACACCGCCGGCCAAGAAAGGT
ACCGTGCCATAACCAGTGCATACTACCGAGGAGCTGTCGGGGCACTTCTA
GTGTATGACGTCACTCGGCATTCCACATTTGAAAATGTGGAAAGGTGGTT
AAGGGAGTTGAGGGATCACACAGATCCCAACATTGTGGTTATGCTCATTG
GTAATAAATCGGATCTCCGTCACCTGGTGGCTGTCTCAACGGAGGACGGG
AAATCATTTGCTGAGAAGGAATCTCTCTTCTTCATGGAAACTCCTGCTCT
GGAGGCTACTAATGTGGACAATGCATTTGCTGAAGTGCTGACTCAAATCT
ACCGTATTGTGAGCAAGAAGGCCATGGAGACAGGTGAGGATGGAGGAAAT
TCTGCTGTACCTTCCAAAGGAGAGAAAATTGATGTCAGTAAAGATGTGTC
TGCTGTGAAGAAAGGTGGCTGCTGCTCAACATAGTGGGTTGATATATTTT
TAACGGAACGAAGCGGCTATGTTAGGCTTTGTCTGTTTTCTCTTCTCCGT
T
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