CK938381
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938381 vs. ExPASy Swiss-Prot
Match: RAB1A_LYMST (Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1) HSP 1 Score: 181.8 bits (460), Expect = 3.468e-45 Identity = 100/208 (48.08%), Postives = 133/208 (63.94%), Query Frame = 1 Query: 52 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETPALEATNVDNAFAEVLTQIYRIVSKKAMETGEDGGNSAVPSKGEKIDVSKDVSAVKKGGCC 675 DYDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R++ +DGK IK QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV++WL+E+ + N+ +L+GNKSDL V K +A++ + F+ET A ATNV+ AF +T I ++ T +V KI+ S VSA KGGCC Sbjct: 7 DYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDFTTAKEYADQLGIPFLETSAKNATNVEQAF---MTMAAEIKNRMGPITAASDSKPSV-----KINSSTPVSA-NKGGCC 205
BLAST of CK938381 vs. ExPASy Swiss-Prot
Match: RAB1_DISOM (Ras-related protein ORAB-1 OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 4.529e-45 Identity = 100/210 (47.62%), Postives = 132/210 (62.86%), Query Frame = 1 Query: 52 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETPALEATNVDNAFAEVLTQIYRIVSKKAMETGEDGGNSAVPSKGEKIDVSKDVSAVKK--GGCC 675 +YDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R++ +DGK IK QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV++WL+E+ + N+ +L+GNK DL V K FA+ + F+ET A ATNV+ AF + +I KK M G G S EK +V+ + VK GGCC Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI-----KKRMGPGATSGGS------EKSNVNIQSTPVKSSGGGCC 202
BLAST of CK938381 vs. ExPASy Swiss-Prot
Match: RAB1B_PONAB (Ras-related protein Rab-1B OS=Pongo abelii GN=RAB1B PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 4.529e-45 Identity = 99/210 (47.14%), Postives = 133/210 (63.33%), Query Frame = 1 Query: 52 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETPALEATNVDNAFAEVLTQIYRIVSKKAMETGEDGGNSAVPSKGEKIDVSKDVSAVKK--GGCC 675 +YDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R++ +DGK IK QIWDTAGQER+R ITS+YYRGA G ++VYDVT ++ NV++WL+E+ + N+ +L+GNKSDL V K FA+ + F+ET A ATNV+ AF + +I KK M G G GE+ ++ D + VK GGCC Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI-----KKRMGPGAASG-------GERPNLKIDSTPVKPAGGGCC 201
BLAST of CK938381 vs. ExPASy Swiss-Prot
Match: RAB1B_MOUSE (Ras-related protein Rab-1B OS=Mus musculus GN=Rab1b PE=1 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 4.529e-45 Identity = 99/210 (47.14%), Postives = 133/210 (63.33%), Query Frame = 1 Query: 52 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETPALEATNVDNAFAEVLTQIYRIVSKKAMETGEDGGNSAVPSKGEKIDVSKDVSAVK--KGGCC 675 +YDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R++ +DGK IK QIWDTAGQER+R ITS+YYRGA G ++VYDVT ++ NV++WL+E+ + N+ +L+GNKSDL V K FA+ + F+ET A ATNV+ AF + +I KK M G G GE+ ++ D + VK GGCC Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEI-----KKRMGPGAASG-------GERPNLKIDSTPVKPASGGCC 201
BLAST of CK938381 vs. ExPASy Swiss-Prot
Match: RAB1B_MACFA (Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 4.529e-45 Identity = 99/210 (47.14%), Postives = 133/210 (63.33%), Query Frame = 1 Query: 52 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETPALEATNVDNAFAEVLTQIYRIVSKKAMETGEDGGNSAVPSKGEKIDVSKDVSAVKK--GGCC 675 +YDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R++ +DGK IK QIWDTAGQER+R ITS+YYRGA G ++VYDVT ++ NV++WL+E+ + N+ +L+GNKSDL V K FA+ + F+ET A ATNV+ AF + +I KK M G G GE+ ++ D + VK GGCC Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI-----KKRMGPGAASG-------GERPNLKIDSTPVKPAGGGCC 201
BLAST of CK938381 vs. ExPASy Swiss-Prot
Match: RAB1B_HUMAN (Ras-related protein Rab-1B OS=Homo sapiens GN=RAB1B PE=1 SV=1) HSP 1 Score: 181.415 bits (459), Expect = 4.529e-45 Identity = 99/210 (47.14%), Postives = 133/210 (63.33%), Query Frame = 1 Query: 52 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETPALEATNVDNAFAEVLTQIYRIVSKKAMETGEDGGNSAVPSKGEKIDVSKDVSAVKK--GGCC 675 +YDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R++ +DGK IK QIWDTAGQER+R ITS+YYRGA G ++VYDVT ++ NV++WL+E+ + N+ +L+GNKSDL V K FA+ + F+ET A ATNV+ AF + +I KK M G G GE+ ++ D + VK GGCC Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI-----KKRMGPGAASG-------GERPNLKIDSTPVKPAGGGCC 201
BLAST of CK938381 vs. ExPASy Swiss-Prot
Match: RAB1B_RAT (Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1) HSP 1 Score: 181.03 bits (458), Expect = 5.916e-45 Identity = 98/210 (46.67%), Postives = 133/210 (63.33%), Query Frame = 1 Query: 52 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETPALEATNVDNAFAEVLTQIYRIVSKKAMETGEDGGNSAVPSKGEKIDVSKDVSAVK--KGGCC 675 +YDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R++ +DGK IK QIWDTAGQER+R +TS+YYRGA G ++VYDVT ++ NV++WL+E+ + N+ +L+GNKSDL V K FA+ + F+ET A ATNV+ AF + +I KK M G G GE+ ++ D + VK GGCC Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEI-----KKRMGPGAASG-------GERPNLKIDSTPVKSASGGCC 201
BLAST of CK938381 vs. ExPASy Swiss-Prot
Match: YPTC1_CHLRE (GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1 PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 7.726e-45 Identity = 96/208 (46.15%), Postives = 134/208 (64.42%), Query Frame = 1 Query: 52 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETPALEATNVDNAFAEVLTQIYRIVSKKAMETGEDGGNSAVPSKGEKIDVSKDVSAVKKGGCC 675 +YDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R++ +DGKVIK QIWDTAGQER+R ITS+YYRGA G ++VYDVT +F NV++WL E+ + N+ +L+GNKSDL V K+FA++ + F+ET A ATNV+ AF + +I ++ + + T + GG P +G+ I+ K CC Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSDLTSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPIPT-KAGGPVVRPQEGKPIN-------SKSSSCC 203
BLAST of CK938381 vs. ExPASy Swiss-Prot
Match: RAB2B_DICDI (Ras-related protein Rab-2B OS=Dictyostelium discoideum GN=rab2B PE=3 SV=1) HSP 1 Score: 180.644 bits (457), Expect = 7.726e-45 Identity = 90/187 (48.13%), Postives = 121/187 (64.71%), Query Frame = 1 Query: 40 RAEDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETPALEATNVDNAFAEVLTQIYRIVSKKAMETGEDGGN 600 R Y++LFK +++GDS VGKSNLL +F F+ S TIGVEF +RS+N++ K IK QIWDTAGQE++R+IT AYYRGAV A++VYD+TR +FE++ WL + R + ++ +LIGNK+DL VST + K FAEK L F ET A A NVD AF + QI + + +G N Sbjct: 16 RKSTSYEHLFKYIMVGDSAVGKSNLLLQFVDKRFAPNSDFTIGVEFGSRSININDKQIKLQIWDTAGQEKFRSITRAYYRGAVCAMIVYDITRRDSFESLNSWLTDCRKFSSCDVTTVLIGNKADLEANRQVSTSEAKEFAEKNGLMFFETSAKTALNVDEAFEKSTEQILKKLESNPGLLSNEGNN 202
BLAST of CK938381 vs. ExPASy Swiss-Prot
Match: RAB1B_PIG (Ras-related protein Rab-1B OS=Sus scrofa GN=RAB1B PE=2 SV=1) HSP 1 Score: 179.874 bits (455), Expect = 1.318e-44 Identity = 99/210 (47.14%), Postives = 133/210 (63.33%), Query Frame = 1 Query: 52 DYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSDLRHLVAVSTEDGKSFAEKESLFFMETPALEATNVDNAFAEVLTQIYRIVSKKAMETGEDGGNSAVPSKGEKIDVSKDVSAVKK--GGCC 675 +YDYLFK++LIGDSGVGKS LL RF + ++ STIGV+F R++ +DGK IK QIWDTAGQER R ITS+YYRGA G ++VYDVT ++ NV++WL+E+ + N+ +L+GNKSDL V K FA+ + F+ET A ATNV+ AF + +I KK M G G GE+ ++ D + VK+ GGCC Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERGRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI-----KKRMGPGAASG-------GERPNLKIDSTPVKQAGGGCC 201 The following BLAST results are available for this feature:
BLAST of CK938381 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938381 ID=CK938381; Name=CK938381; organism=Citrus sinensis; type=EST; length=751bpback to top |