CX675487
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675487 vs. ExPASy Swiss-Prot
Match: TPIS_TREDE (Triosephosphate isomerase OS=Treponema denticola GN=tpiA PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 5.864e-27 Identity = 71/176 (40.34%), Postives = 97/176 (55.11%), Query Frame = 1 Query: 61 RKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLR-SDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--DWDNVVLAYEPVWAIGTGK 579 +KF++ NWK N E K++ + + SVL+ S+ + AQN + + GA TGEVS L+++ + VILGHSERR + E++D + KV AL GL+VI CVGE LE+RE+G AV Q K ++S D D V +AYEPVWAIGTGK Sbjct: 2 KKFYIAANWKMNMNRAEAKQLATEMKAG--LKDGKNKYMIAPSFTLLQDVASVLKGSNILLGAQNMGLEEKGAHTGEVSVLQLLDVGVQAVILGHSERRHIYKETDDLINKKVKLALKHGLEVILCVGELLEEREAGHAEAVCERQIKKGLAEVSAKDLDKVTIAYEPVWAIGTGK 175
BLAST of CX675487 vs. ExPASy Swiss-Prot
Match: TPIS_THEP3 (Triosephosphate isomerase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=tpiA PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 5.864e-27 Identity = 69/175 (39.43%), Postives = 96/175 (54.86%), Query Frame = 1 Query: 61 RKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISDWD--NVVLAYEPVWAIGTGK 579 R+ + GNWK + T E K+V L + K + ++ + AQ+ + + GA+TGE+S ML + + +V++GHSERR E+++ V KV ALS GL I CVGE+L QRE G T VV QTK + +S D NVV+AYEP+WAIGTGK Sbjct: 2 RRPIIAGNWKMHMTPSEAVKLVEELIP-QVKDAKAEVVVIPPFVDLTEVNKVIQGTNILLGAQDMFWEEKGAYTGEISPLMLKEIGVKYVVIGHSERRQYFGETDEMVNKKVLSALSHGLSPIVCVGESLSQREEGKTFEVVLNQTKEALKGVSHDDIVNVVIAYEPIWAIGTGK 175
BLAST of CX675487 vs. ExPASy Swiss-Prot
Match: TPIS_RHOBA (Triosephosphate isomerase OS=Rhodopirellula baltica GN=tpiA PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 5.864e-27 Identity = 68/177 (38.42%), Postives = 97/177 (54.80%), Query Frame = 1 Query: 55 MARKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISD--WDNVVLAYEPVWAIGTGK 579 M+R+ + GNWK N +E + + A +V+ + + AQN + + GAFTGEV+A ML ++ +VILGHSERR L+ E++ V K+ AL+ L I CVGETLEQRE+ T +V+ Q + E + + N+V+AYEPVWAIGTGK Sbjct: 1 MSRRILIAGNWKMNMRAESGASLAKGIVDAVGKSPAVEVVLCPPSVYLSGVADAVVGTPVELGAQNLYAAEDGAFTGEVNASMLTDVGCRFVILGHSERRQLMGETDACVAKKLHAALAGNLVPIVCVGETLEQREADDTESVIETQIRGSLEGLDEARAANIVIAYEPVWAIGTGK 177
BLAST of CX675487 vs. ExPASy Swiss-Prot
Match: TPIS_MARAV (Triosephosphate isomerase OS=Marinobacter aquaeolei (strain ATCC 700491 / DSM 11845 / VT8) GN=tpiA PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 5.864e-27 Identity = 67/175 (38.29%), Postives = 92/175 (52.57%), Query Frame = 1 Query: 61 RKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISD--WDNVVLAYEPVWAIGTGK 579 R+ V GNWK NG+ + VK++V + + AQN + GA+TGE+SAEM ++ +V++GHSERR L E++ KV L GL + CVGETL +RE+ AVVAEQ ++ ++D W VV+AYEPVWAIGTGK Sbjct: 2 RRRIVAGNWKMNGSKDLVKQLVGAVREQSGSVGEDVEVVIIPPAIYLDQVAEQGGGRITTGAQNVSQWQSGAYTGEISAEMARDMGCGYVLVGHSERRQLFGETDSVAAAKVEQVLLSGLVAVLCVGETLAEREADQAEAVVAEQVRSGLSVVADGQWSRVVVAYEPVWAIGTGK 176
BLAST of CX675487 vs. ExPASy Swiss-Prot
Match: TPIS_ALCBS (Triosephosphate isomerase OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=tpiA PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 5.864e-27 Identity = 69/177 (38.98%), Postives = 99/177 (55.93%), Query Frame = 1 Query: 55 MARKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEK--ISDWDNVVLAYEPVWAIGTGK 579 M R V GNWK NG K +++ + A +S + + +QN ++ GAFTGEVSA ML + +VI+GHSERRAL E++ + K A+A + GL I CVGETLE+R+SG+T +V Q +A+ + ++ + N ++AYEPVWAIGTGK Sbjct: 1 MNRTPLVAGNWKMNGR----KDLLTEMADALAGYAGAAEVVICPPFPYLAAARSAMPGAVGIGSQNVSEQEDGAFTGEVSAPMLAEVGCGYVIIGHSERRALYGETDAQIASKFAHAQAAGLVPILCVGETLEERDSGNTDTIVCGQLRAVVDAVGVAAFANAIVAYEPVWAIGTGK 173
BLAST of CX675487 vs. ExPASy Swiss-Prot
Match: TPIS_COREF (Triosephosphate isomerase OS=Corynebacterium efficiens GN=tpiA PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 7.658e-27 Identity = 73/182 (40.11%), Postives = 98/182 (53.85%), Query Frame = 1 Query: 55 MARKFFVGGNWKCNGTSEE----VKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--DWDNVVLAYEPVWAIGTGKV 582 MARK + GNWK N ++ V+K+ L++ + AQ+ + GA+TGEVSA ML L+ WV++GHSERR NE+++ V K ALS+G+ I CVGE LE RE+G+ V V EQT+A +S + N V+AYEPVWAIGTGKV Sbjct: 4 MARKPLIAGNWKMNLDHQQAIGTVQKLAFALHKDYYEKVDVAVIVPFTDLRSVQTLVEGDKLQITYGAQDVSQHESGAYTGEVSASMLAKLNCSWVVVGHSERREYHNETDELVAAKAKAALSKGISPIVCVGEPLEIREAGTHVDYVVEQTRASLAGLSADELANTVIAYEPVWAIGTGKV 185
BLAST of CX675487 vs. ExPASy Swiss-Prot
Match: TPIS_COLP3 (Triosephosphate isomerase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=tpiA PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 7.658e-27 Identity = 72/180 (40.00%), Postives = 99/180 (55.00%), Query Frame = 1 Query: 55 MARKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXK---SVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEK--ISDWDNVVLAYEPVWAIGTGK 579 M R+ V NWK NG S V +VS L E K + L HV +QN + GA+TGEVS ML NL+I +VI+GHSERR++ E++ V KV AL+ GL I C+GE+ +R +G T V++ Q + + ++ I + +VV+AYEPVWAIGTGK Sbjct: 1 MTRQAIVAANWKMNGDSALVDTMVSGLADIELSSHVDVVICPSFPYLSELNQKIKAANLNEAIHVGSQNVSEHESGAYTGEVSTAMLQNLAINYVIVGHSERRSIFKETSTQVAKKVHAALNAGLTPILCIGESEAERATGETETVLSAQIQPVIDEIGIEKFKDVVIAYEPVWAIGTGK 180
BLAST of CX675487 vs. ExPASy Swiss-Prot
Match: TPIS_CLOBB (Triosephosphate isomerase OS=Clostridium botulinum (strain Eklund 17B / Type B) GN=tpiA PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 7.658e-27 Identity = 71/175 (40.57%), Postives = 93/175 (53.14%), Query Frame = 1 Query: 61 RKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKIS--DWDNVVLAYEPVWAIGTGK 579 RK + GNWK N T +E K+V L K+ S+ VAAQN + GAFTGEV+ ML + I +V+LGHSERR NE+++ + KV A + + I C GETLEQRESG T +A Q K ++ + VV+AYEP+WAIGTGK Sbjct: 2 RKAIIAGNWKMNKTVDEAVKVVEELKPL-VKDATCDVVVCPTFVCLDAVKKATAGSNIKVAAQNMHFEESGAFTGEVAPGMLEAMGIEYVVLGHSERREYFNETDEAINKKVKAAFAHNITPIVCCGETLEQRESGVTNNFIACQIKVDIAGLTKEQAEKVVIAYEPIWAIGTGK 175
BLAST of CX675487 vs. ExPASy Swiss-Prot
Match: TPIS_CLOB8 (Triosephosphate isomerase OS=Clostridium beijerinckii (strain ATCC 51743 / NCIMB 8052) GN=tpiA PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 7.658e-27 Identity = 70/175 (40.00%), Postives = 96/175 (54.86%), Query Frame = 1 Query: 61 RKFFVGGNWKCNGTSEEVKKIVSTLNQAEXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKISD--WDNVVLAYEPVWAIGTGK 579 RK + GNWK N T +E K+V L K+V S+ VAAQN + GAFTGEV+ ML + I +V+LGHSERR NE+++ + KV A + I C GE+LEQRE+G+T V+ Q KA +++ + +V+AYEP+WAIGTGK Sbjct: 2 RKAIIAGNWKMNKTIDEAVKMVEELKPL-VKDATCDVVVCPTFVCLDAVKKAVAGSNIKVAAQNMHFEESGAFTGEVAPGMLEAMGIDYVVLGHSERREYFNETDEALNKKVKKAFEHNITPILCCGESLEQRENGTTNKVIEAQIKADIAGLTNEQVEKLVIAYEPIWAIGTGK 175
BLAST of CX675487 vs. ExPASy Swiss-Prot
Match: TPIS_PORGI (Triosephosphate isomerase OS=Porphyromonas gingivalis GN=tpiA PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.000e-26 Identity = 71/176 (40.34%), Postives = 99/176 (56.25%), Query Frame = 1 Query: 61 RKFFVGGNWKCNGTSEEVKKIVSTLNQA-EXXXXXXXXXXXXXXXXXXXXXKSVLRSDFHVAAQNCWVRKGGAFTGEVSAEMLVNLSIPWVILGHSERRALLNESNDFVGDKVAYALSQGLKVIACVGETLEQRESGSTVAVVAEQTKAIAEKI--SDWDNVVLAYEPVWAIGTGK 579 RK V GNWK N T +E + L+ A + ++ + VAA+NC ++ GA+TGEVSA M+ + +VI+GHSERRA +E++ + +KV ALS GL I CVGE LE+RE+G VVA Q + + +D+ ++LAYEPVWAIGTGK Sbjct: 2 RKNIVAGNWKMNKTLQEGLALAKELDAALKGRTINCDVIIGTPFIHLASIAAAIDTTRIGVAAENCADKESGAYTGEVSAAMVASTGARYVIIGHSERRAYYHETSPILMEKVKLALSNGLTPIFCVGEVLEEREAGKHFEVVARQVEEALFTLDQTDFAKLILAYEPVWAIGTGK 177 The following BLAST results are available for this feature:
BLAST of CX675487 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675487 ID=CX675487; Name=CX675487; organism=Citrus sinensis; type=EST; length=582bpback to top |