CK938373

Overview
NameCK938373
Unique NameCK938373
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10319 contig Csv1_Contig10319:120..939. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER1_WHEAT (Peroxidase OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 232.261 bits (591), Expect = 2.589e-60
Identity = 122/256 (47.66%), Postives = 164/256 (64.06%), Query Frame = 1
Query:   55 MAATSYYFLLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIY-NDSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNLL 819
            M + S   L++++   TA    A+ QLS+ +Y ++CP+AL  +++G+ AA+ ++ R+GASLLRLHFHDCF  GCD SVLL        E+ A PN  S RGF V+D IK  LE  C + VSCADIL +A RDSVV  GGPSW V LG               +P P+S+ S L ++F  + L+  +MVAL+G HT+GKA+C++FR  IY  D+NI+T+FA SL+  CP+ G +  LANLD  TP  FDN YY NLL
Sbjct:    3 MGSASCISLVVLVALATA----ASGQLSSTFYDTSCPRALVAIKSGVAAAVSSDPRMGASLLRLHFHDCF--GCDASVLLTGM-----EQNAGPNVGSLRGFGVIDNIKTQLESVCKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSTTASASLANSDLPGPSSSRSQLEAAFLKKNLNTVDMVALSGAHTIGKAQCSNFRTRIYGGDTNINTAFATSLKANCPQSGGNTNLANLDTMTPNAFDNAYYTNLL 247          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER40_ARATH (Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=2 SV=2)

HSP 1 Score: 229.18 bits (583), Expect = 2.191e-59
Identity = 119/236 (50.42%), Postives = 147/236 (62.29%), Query Frame = 1
Query:  133 LSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIY-------NDSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNLL 819
            L    Y+++CP+A SIV + +   +  + R+ ASLLRLHFHDCFVNGCD SVLLDDT   +GEKTA PN NS RGF V+D IK+++E  CP  VSCADILA+A RDSVVV GGP W+V +G               +P P S +S LIS+F   GLS  +MVAL+GGHT+GKARCTSF   +         +   +  F  SLQQ C   G    +  LD  TP+ FDN YY NLL
Sbjct:   50 LDFGLYRNSCPEAESIVYSWVETTVLEDPRMAASLLRLHFHDCFVNGCDASVLLDDTEGLVGEKTAPPNLNSLRGFEVIDSIKSDIESVCPETVSCADILAMAARDSVVVSGGPRWEVEVGRKDSRTASKQAATNGLPSPNSTVSTLISTFQNLGLSQTDMVALSGGHTLGKARCTSFTARLQPLQTGQPANHGDNLEFLESLQQLCSTVGPSVGITQLDLVTPSTFDNQYYVNLL 285          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER72_ARATH (Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=1 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 2.862e-59
Identity = 112/236 (47.46%), Postives = 148/236 (62.71%), Query Frame = 1
Query:  133 LSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYN-------DSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNLL 819
            L   +Y  +CPKA  IV++ +  A +++ R+ ASLLRLHFHDCFV GCD S+LLD +   I EK + PN NSARGF ++++IK  LE+ CP  VSCADILA+A RDS V+ GGPSW+V LG               IP P +    +++ F  QGL L ++V+L+G HT+G +RCTSFR  +YN       D  +   +A  L+QRCPR G D  L  LD  TP  FDN Y+KNL+
Sbjct:   33 LFPQFYDQSCPKAQEIVQSIVAKAFEHDPRMPASLLRLHFHDCFVKGCDASILLDSSGTIISEKRSNPNRNSARGFELIEEIKHALEQECPETVSCADILALAARDSTVITGGPSWEVPLGRRDARGASLSGSNNDIPAPNNTFQTILTKFKRQGLDLVDLVSLSGSHTIGNSRCTSFRQRLYNQSGNGKPDMTLSQYYATLLRQRCPRSGGDQTLFFLDFATPFKFDNHYFKNLI 268          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER37_ARATH (Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=2 SV=1)

HSP 1 Score: 228.409 bits (581), Expect = 3.738e-59
Identity = 117/255 (45.88%), Postives = 163/255 (63.92%), Query Frame = 1
Query:   76 FLLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLS-LKNMVALAGGHTVGKARCTSFRGHIYNDSN-------IDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNL 816
            FLLL++      +  +++QLS ++Y  TCP+   I    I+ A++++ R+ AS+LRLHFHDCFVNGCD S+LLD+T +F  EK A  N NSARGF+V+D++KA +EKACP+ VSCAD+LAIA ++SVV+ GGPSW+V  G               +P P   L+ L   F   GL    ++VAL+GGHT GK +C      +YN SN       +D S+  +L+++CPR GN +VL + D +TPT FDN YY NL
Sbjct:   10 FLLLLIQ-----VSLSHAQLSPSFYDKTCPQVFDIATTTIVNALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFDVIDKMKAAVEKACPKTVSCADLLAIAAQESVVLAGGPSWRVPNGRRDSLRGFMDLANDNLPAPFFTLNQLKDRFKNVGLDRASDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLDKSYLSTLRKQCPRNGNQSVLVDFDLRTPTLFDNKYYVNL 259          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER15_IPOBA (Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 4.882e-59
Identity = 115/262 (43.89%), Postives = 165/262 (62.98%), Query Frame = 1
Query:   55 MAATSYYFLLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTAN-FIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYNDSN-------IDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNL 816
            MA+ S    + +  F+ ++   +N+QLS+ +Y +TCP   +IVR  +  A++N+ R+G SL+RLHFHDCFV+GCDGS+LLD+     + EK A+PN NS RGF+VVD IK  +E ACP VVSC DILA+A+  SV + GGPSW V LG               +P P  NL+ L   F+  GL++ ++VAL+G HT G+A+C +F   ++N SN       ++T++  +LQQ CP+ G+   + NLD  TP  FDN Y+ NL
Sbjct:    1 MASFSPLLAMALAIFIFSS--HSNAQLSSTFYSTTCPNVSAIVRTVVQQALQNDARIGGSLIRLHFHDCFVDGCDGSLLLDNNGTTIVSEKDALPNTNSTRGFDVVDNIKTAVENACPGVVSCVDILALASESSVSLAGGPSWNVLLGRRDRRTANQGGANTSLPSPFENLTNLTQKFTNVGLNVNDLVALSGAHTFGRAQCRTFSPRLFNFSNTGNPDPTLNTTYLATLQQICPQGGSGFTVTNLDPTTPDTFDNNYFSNL 260          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER1_HORVU (Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 6.376e-59
Identity = 120/259 (46.33%), Postives = 168/259 (64.86%), Query Frame = 1
Query:   55 MAATSYYFLLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQ-GLSLKNMVALAGGHTVGKARCTSFRGHIY-NDSNIDTSFARSLQQRCPRR--GNDNVLANLDRQTPTCFDNLYYKNLL 819
            MA++SY  LL+++  VTA    A++QLS  +Y ++CP+AL+ +++G++AA+ ++ R+GASLLRLHFHDCFV GCD SVLL        E+ A+PN  S RGF V+D IK  +E  C + VSCADIL +A RDSVV  GGPSW V LG               +P   S+ + L ++F  + GL+  +MVAL+G HT+G+A+C++FR  IY  D+NI+ ++A SL+  CP+     D  LANLD  T   FDN YY NL+
Sbjct:    1 MASSSYTSLLVLVALVTA----ASAQLSPTFYDTSCPRALATIKSGVMAAVTSDPRMGASLLRLHFHDCFVQGCDASVLLSGM-----EQNAIPNAGSLRGFGVIDSIKTQIEAICKQTVSCADILTVAARDSVVALGGPSWTVPLGRRDSIDANENEANTDLPGFNSSRAELEAAFLKKGGLNTVDMVALSGAHTIGQAQCSTFRARIYGGDTNINAAYAASLRANCPQTVGSGDGSLANLDTTTANTFDNAYYTNLM 250          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER1B_ARMRU (Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE=3 SV=1)

HSP 1 Score: 227.639 bits (579), Expect = 6.376e-59
Identity = 116/261 (44.44%), Postives = 168/261 (64.37%), Query Frame = 1
Query:   58 AATSYYFLLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSL-KNMVALAGGHTVGKARCTSFRGHIYNDSN-------IDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNL 816
            ++TS+ ++L+ L  +      +++QL+  +Y ++CP   +IVR  II  ++++ R+ AS+LRLHFHDCFVNGCD S+LLD+T +F+ EK A+ N NSARGF  VD+IKA +E+ACPR VSCAD+L IA + SV + GGPSW+V LG               +P P   L  L  +F+  GL    ++VAL+GGHT GK +C      +YN SN       ++T++ ++L+Q+CP  GN +VL + D +TPT FDN YY NL
Sbjct:    5 SSTSFTWILITLGCLAFYASLSDAQLTPTFYDTSCPNVSNIVRDIIINELRSDPRITASILRLHFHDCFVNGCDASILLDNTTSFLTEKDALGNANSARGFPTVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSLQAFLDLANANLPAPFFTLPQLKDAFAKVGLDRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRQQCPLNGNQSVLVDFDLRTPTVFDNKYYVNL 265          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER2_ARMRU (Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.423e-58
Identity = 119/255 (46.67%), Postives = 160/255 (62.75%), Query Frame = 1
Query:   76 FLLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSL-KNMVALAGGHTVGKARCTSFRGHIYNDSN-------IDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNL 816
            FLLL+L      +  +++QLS ++Y  TCP+   I    I  A++++ R+ AS+LRLHFHDCFVNGCD S+LLD+T +F  EK A  N  SARGF+V+D +KA +EKACP+ VSCAD+LAIA + SVV+ GGPSWKV  G               +P P+S L  L   F   GL    ++VAL+GGHT GK +C      +YN SN       +D S+  +L+++CPR GN +VL + D +TPT FDN YY NL
Sbjct:   12 FLLLLLN-----VSLSHAQLSPSFYDKTCPQVFDIATNTIKTALRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNARSARGFDVIDTMKAAVEKACPKTVSCADLLAIAAQKSVVLAGGPSWKVPSGRRDSLRGFMDLANDNLPGPSSTLQVLKDKFRNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLYNFSNSGKPDPTLDKSYLSTLRKQCPRNGNLSVLVDFDLRTPTIFDNKYYVNL 261          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER1C_ARMRU (Peroxidase C1C (Fragment) OS=Armoracia rusticana GN=PRXC1C PE=3 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 2.423e-58
Identity = 114/240 (47.50%), Postives = 159/240 (66.25%), Query Frame = 1
Query:  121 ANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSL-KNMVALAGGHTVGKARCTSFRGHIYNDSN-------IDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNL 816
            +N+QL+  +Y ++CP   +IVR  II  ++++  + AS+LRLHFHDCFVNGCD S+LLD+T +F  EK A  N NSARGF VVD+IKA +E+ACPR VSCAD+L IA + SV + GGPSW+V LG               +P P+  L  L ++F+  GL+   ++VAL+GGHT GK +C      +YN SN       ++T++ ++L+Q+CPR GN +VL + D +TPT FDN YY NL
Sbjct:    7 SNAQLTPTFYDNSCPNVSNIVRDIIINELRSDPSIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAFGNANSARGFPVVDRIKAAVERACPRTVSCADVLTIAAQQSVNLAGGPSWRVPLGRRDSRQAFLDLANANLPAPSFTLPELKAAFANVGLNRPSDLVALSGGHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRQQCPRNGNQSVLVDFDLRTPTVFDNKYYVNL 246          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER9_ARATH (Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 3.164e-58
Identity = 112/238 (47.06%), Postives = 151/238 (63.45%), Query Frame = 1
Query:  127 SQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYN-------DSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNLL 819
            S L   +Y+ +CP+A  IV   +  AI  E R+ ASLLRLHFHDCFV GCD S+LLDD+A    EK A PN NS RGF V+D+IKA LE+ACP+ VSCADILA+A R S ++ GGPSW++ LG               IP P S +  L++ F  +GL+ +++V+L+GGHT+G ARCT+F+  +YN       D  ++ S+   L+  CP  G DN ++ LD  +P  FDN Y+K LL
Sbjct:   43 SNLYPQFYQFSCPQADEIVMTVLEKAIAKEPRMAASLLRLHFHDCFVQGCDASILLDDSATIRSEKNAGPNKNSVRGFQVIDEIKAKLEQACPQTVSCADILALAARGSTILSGGPSWELPLGRRDSRTASLNGANTNIPAPNSTIQNLLTMFQRKGLNEEDLVSLSGGHTIGVARCTTFKQRLYNQNGNNQPDETLERSYYYGLRSICPPTGGDNNISPLDLASPARFDNTYFKLLL 280          
The following BLAST results are available for this feature:
BLAST of CK938373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
PER1_WHEAT2.589e-6047.66Peroxidase OS=Triticum aestivum PE=2 SV=1[more]
PER40_ARATH2.191e-5950.42Peroxidase 40 OS=Arabidopsis thaliana GN=PER40 PE=... [more]
PER72_ARATH2.862e-5947.46Peroxidase 72 OS=Arabidopsis thaliana GN=PER72 PE=... [more]
PER37_ARATH3.738e-5945.88Peroxidase 37 OS=Arabidopsis thaliana GN=PER37 PE=... [more]
PER15_IPOBA4.882e-5943.89Peroxidase 15 OS=Ipomoea batatas GN=pod PE=1 SV=1[more]
PER1_HORVU6.376e-5946.33Peroxidase 1 OS=Hordeum vulgare PE=2 SV=1[more]
PER1B_ARMRU6.376e-5944.44Peroxidase C1B OS=Armoracia rusticana GN=PRXC1B PE... [more]
PER2_ARMRU2.423e-5846.67Peroxidase C2 OS=Armoracia rusticana GN=PRXC2 PE=3... [more]
PER1C_ARMRU2.423e-5847.50Peroxidase C1C (Fragment) OS=Armoracia rusticana G... [more]
PER9_ARATH3.164e-5847.06Peroxidase 9 OS=Arabidopsis thaliana GN=PER9 PE=1 ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004443_F11 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IVF_F11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938373 ID=CK938373; Name=CK938373; organism=Citrus sinensis; type=EST; length=820bp
GGGACGTATTTATAAAGGCAAAAATCTCTCTTGACGACTGCAGAAGTGCT
AGATATGGCAGCAACAAGTTACTACTTTCTCCTTCTTATACTTACTTTTG
TCACTGCAACTCTTGATCAAGCCAACTCCCAACTCTCAACAAACTACTAC
AAATCCACATGCCCAAAAGCATTGTCTATTGTTCGGGCAGGGATTATAGC
TGCTATAAAAAATGAAACACGCGTAGGGGCGTCTTTACTTCGACTTCATT
TCCACGACTGCTTTGTCAATGGCTGCGATGGATCGGTACTGTTGGATGAT
ACGGCCAATTTCATAGGAGAGAAAACAGCAGTTCCTAACAATAACTCGGC
CAGAGGGTTCAACGTGGTGGATCAGATTAAAGCTAATCTGGAGAAAGCAT
GCCCCCGTGTTGTTTCGTGTGCAGATATTCTTGCCATTGCCACACGCGAT
TCAGTTGTTGTTTTCGGAGGTCCTTCATGGAAAGTTAGATTGGGAAGAAG
AGATTCTACCACTGCTAGCAGGGCAGCGGCAAATACCTCCATCCCTCCAC
CCACTTCTAATTTGAGTGCTCTCATATCAAGCTTCTCGGCACAGGGTCTC
TCATTAAAGAACATGGTGGCTCTTGCTGGTGGACATACGGTAGGCAAGGC
AAGGTGCACATCATTTCGAGGACACATTTACAACGATTCCAATATTGACA
CCAGCTTCGCCAGGTCCTTGCAGCAGAGATGCCCAAGAAGAGGAAATGAC
AATGTTCTGGCAAACCTTGACCGTCAAACTCCAACGTGCTTTGACAATTT
ATATTACAAGAATCTGTTGA
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