CK938373

Overview
NameCK938373
Unique NameCK938373
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10319 contig Csv1_Contig10319:120..939. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER32_ARATH (Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=1 SV=3)

HSP 1 Score: 225.328 bits (573), Expect = 3.164e-58
Identity = 113/240 (47.08%), Postives = 155/240 (64.58%), Query Frame = 1
Query:  121 ANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSL-KNMVALAGGHTVGKARCTSFRGHIYNDSN-------IDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNL 816
            +++QL+  +Y +TCP   +IVR  I+  ++++ R+ AS+LRLHFHDCFVNGCD S+LLD+T +F  EK A PN NSARGF V+D++KA +E ACPR VSCADIL IA + +V + GGPSW+V LG               +P P   L  L +SF   GL    ++VAL+GGHT GK +C      +YN SN       ++T++ ++L+ +CPR GN  VL + D +TPT FDN YY NL
Sbjct:   27 SSAQLTPTFYDNTCPSVFTIVRDTIVNELRSDPRIAASILRLHFHDCFVNGCDASILLDNTTSFRTEKDAAPNANSARGFPVIDRMKAAVETACPRTVSCADILTIAAQQAVNLAGGPSWRVPLGRRDSLQAFFALANTNLPAPFFTLPQLKASFQNVGLDRPSDLVALSGGHTFGKNQCQFIMDRLYNFSNTGLPDPTLNTTYLQTLRGQCPRNGNQTVLVDFDLRTPTVFDNKYYVNL 266          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER59_ARATH (Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=1 SV=2)

HSP 1 Score: 221.861 bits (564), Expect = 3.499e-57
Identity = 116/238 (48.74%), Postives = 150/238 (63.03%), Query Frame = 1
Query:  127 SQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYN-------DSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNLL 819
            +QLS + Y  +CP  + IVR  +  A+K E R+ ASL+RLHFHDCFVNGCD S+LLD   +   EK A+PN NSARGF V+D IKA +E ACP VVSCADIL +A RDSVV+ GGP W+V LG               +P P   L A+I+ F A  L++ ++VAL+G HT G+A+C  F   ++N       D+ ++TS   +LQ  CP  GN N+ A LDR T   FDN Y+KNLL
Sbjct:   28 AQLSPDIYAKSCPNLVQIVRKQVAIALKAEIRMAASLIRLHFHDCFVNGCDASLLLDGADS---EKLAIPNINSARGFEVIDTIKAAVENACPGVVSCADILTLAARDSVVLSGGPGWRVALG-RKDGLVANQNSANNLPSPFEPLDAIIAKFVAVNLNITDVVALSGAHTFGQAKCAVFSNRLFNFTGLGNPDATLETSLLSNLQTVCPLGGNSNITAPLDRSTTDTFDNNYFKNLL 261          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PERN_ARMRU (Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 5.968e-57
Identity = 121/254 (47.64%), Postives = 155/254 (61.02%), Query Frame = 1
Query:   82 LLILTFVTATLDQA-NSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYN-------DSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNLL 819
            +L+  F    L  A  +QLS + Y  +CP  L IVR  +  A+K E R+ ASL+RLHFHDCFVNGCD SVLLD T +   EK A+PN NS RGF V+D IKA +E ACP VVSCADIL +A RDSV + GGP W+V LG               +P P   L A+I+ F+A GL++ ++VAL+G HT G+A+C  F   ++N       DS ++T+    LQ  CP  GN N  A LDR +   FDN Y+KNLL
Sbjct:   12 VLLTVFTLCMLCSAVRAQLSPDIYAKSCPNLLQIVRDQVKIALKAEIRMAASLIRLHFHDCFVNGCDASVLLDGTNS---EKLAIPNVNSVRGFEVIDTIKAAVENACPGVVSCADILTLAARDSVYLSGGPQWRVALG-RKDGLVANQSSANNLPSPFEPLDAIIAKFAAVGLNVTDVVALSGAHTFGQAKCDLFSNRLFNFTGAGTPDSTLETTLLSDLQTVCPIGGNGNKTAPLDRNSTDAFDNNYFKNLL 261          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER2_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.962e-56
Identity = 113/233 (48.50%), Postives = 146/233 (62.66%), Query Frame = 1
Query:  124 NSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYNDS-NIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNLL 819
            N+QLST +Y +TCP ALS +R  I +++ +  R  A ++RL FHDCFV GCD S+LL       G + A P N+   G+ V+D  KA +E+ CP VVSCADILA+A RD+ V  GGPSW VRLG               +P     LS LIS+F+ +GL+ + MVAL+G HT+G+ARC  FRG IYN +  I+ +F RSL Q CP  GND  L  LD  TP  FDN YY+NL+
Sbjct:   29 NAQLSTTFYDTTCPTALSTIRTSIRSSVSSNRRNAALVIRLLFHDCFVQGCDASLLLSGA----GSERASPANDGVLGYEVIDAAKAAVERVCPGVVSCADILAVAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLNTREMVALSGSHTLGQARCIRFRGRIYNSTLRIEPNFNRSLSQACPPTGNDATLRPLDLVTPNSFDNNYYRNLV 257          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER1_ZINEL (Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 2.962e-56
Identity = 113/233 (48.50%), Postives = 146/233 (62.66%), Query Frame = 1
Query:  124 NSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYNDS-NIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNLL 819
            N+QLST +Y +TCP ALS +R  I +++ +  R  A ++RL FHDCFV GCD S+LL       G + A P N+   G+ V+D  KA +E+ CP VVSCADILA+A RD+ V  GGPSW VRLG               +P     LS LIS+F+ +GL+ + MVAL+G HT+G+ARC  FRG IYN +  I+ +F RSL Q CP  GND  L  LD  TP  FDN YY+NL+
Sbjct:   29 NAQLSTTFYDTTCPTALSTIRTSIRSSVSSNRRNAALVIRLLFHDCFVQGCDASLLLSGA----GSERASPANDGVLGYEVIDAAKAAVERVCPGVVSCADILAVAARDASVAVGGPSWTVRLGRRDSTTSNAAQAATDLPRGNMVLSQLISNFANKGLNTREMVALSGSHTLGQARCIRFRGRIYNSTLRIEPNFNRSLSQACPPTGNDATLRPLDLVTPNSFDNNYYRNLV 257          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER4_ARATH (Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 6.598e-56
Identity = 111/249 (44.58%), Postives = 155/249 (62.25%), Query Frame = 1
Query:   76 FLLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIY-NDSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNLL 819
            F +L+L        QA  QLS  +Y  TC  ALS +R+ I  AI  E R+ ASL+RLHFHDCFVNGCD SV+L  T     E+ ++ N  SARGF V+DQ K+ +E  CP VVSCADI+A+A RD+    GGP + V++G               +P   ++L+ L   F  +GL+ +++VAL+G HT+G+A+C +F+G +Y N S+ID  F+ + ++RCP  G D  LA LD+ TP  FDN YY+NL+
Sbjct:    4 FKILVLLLSLCCFSQA--QLSPTFYDQTCQNALSTIRSSIRTAISRERRMAASLIRLHFHDCFVNGCDASVMLVATPTMESERDSLANFQSARGFEVIDQAKSAVESVCPGVVSCADIIAVAARDASEYVGGPRYDVKVGRRDSTNAFRAIADRDLPNFRASLNDLSELFLRKGLNTRDLVALSGAHTLGQAQCLTFKGRLYDNSSDIDAGFSSTRKRRCPVNGGDTTLAPLDQVTPNSFDNNYYRNLM 250          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PERE5_ARMRU (Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 8.617e-56
Identity = 109/237 (45.99%), Postives = 147/237 (62.03%), Query Frame = 1
Query:  130 QLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSL-KNMVALAGGHTVGKARCTSFRGHIYN-------DSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNL 816
            QL  ++Y  TCP   +I++  I+  ++ + R+ AS+LRLHFHDCFV GCD S+LLD + +F  EK A PN NSARGFNV+D++K  LE+ACPR VSCADIL IA++ SV++ GGPSW V LG               +P P   L+ L  +F+  GL+   ++VAL+GGHT G+ARC      +YN       D  ++ S+   L++ CPR GN  VL N D  TP  FDN +Y NL
Sbjct:    1 QLRPDFYSRTCPSVFNIIKNVIVDELQTDPRIAASILRLHFHDCFVRGCDASILLDTSKSFRTEKDAAPNVNSARGFNVIDRMKTALERACPRTVSCADILTIASQISVLLSGGPSWAVPLGRRDSVEAFFDLANTALPSPFFTLAQLKKAFADVGLNRPSDLVALSGGHTFGRARCLFVTARLYNFNGTNRPDPTLNPSYLADLRRLCPRNGNGTVLVNFDVMTPNTFDNQFYTNL 237          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER5_ARATH (Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 SV=2)

HSP 1 Score: 217.238 bits (552), Expect = 8.617e-56
Identity = 109/251 (43.43%), Postives = 158/251 (62.95%), Query Frame = 1
Query:   73 YFLLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLG-XXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIY-NDSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNLL 819
            + L+++   +T+++ QA  QLS  +Y  +C  ALS +R+ +  AI  E R+ ASL+R+HFHDCFV+GCD S+LL+ T+    E+ A+PN  S RGF V+D+ K+ +EK CP +VSCADI+A+A RD+    GGP W V++G                +P     L  L   FS +GL+ +++VAL+G HT+G+++C  FR  +Y N S+ID  FA + ++RCP  G D  LA LD  TP  FDN YYKNL+
Sbjct:    8 FVLMMVSIILTSSICQA--QLSPTFYDQSCRNALSKIRSSVRTAIARERRMAASLIRMHFHDCFVHGCDASILLEGTSTIESERDALPNFKSVRGFEVIDKAKSEVEKVCPGIVSCADIIAVAARDASEYVGGPKWAVKVGRRDSTAAFKALANSGELPGFKDTLDQLSGLFSKKGLNTRDLVALSGAHTIGQSQCFLFRDRLYENSSDIDAGFASTRKRRCPTVGGDGNLAALDLVTPNSFDNNYYKNLM 256          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER33_ARATH (Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=1 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.470e-55
Identity = 108/240 (45.00%), Postives = 154/240 (64.17%), Query Frame = 1
Query:  121 ANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSL-KNMVALAGGHTVGKARCTSFRGHIYNDSN-------IDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNL 816
            +++QL+  +Y ++CP   +IVR  I+  ++++ R+  S+LRLHFHDCFVNGCD S+LLD+T +F  EK A+ N NSARGF V+D++KA +E+ACPR VSCAD+L IA + SV + GGPSWKV LG               +P P   L  L ++F   GL    ++VAL+G HT GK +C      +YN SN       ++T++ ++L+ +CPR GN +VL + D +TP  FDN YY NL
Sbjct:   29 SDAQLTPTFYDTSCPTVTNIVRDTIVNELRSDPRIAGSILRLHFHDCFVNGCDASILLDNTTSFRTEKDALGNANSARGFPVIDRMKAAVERACPRTVSCADMLTIAAQQSVTLAGGPSWKVPLGRRDSLQAFLDLANANLPAPFFTLPQLKANFKNVGLDRPSDLVALSGAHTFGKNQCRFIMDRLYNFSNTGLPDPTLNTTYLQTLRGQCPRNGNQSVLVDFDLRTPLVFDNKYYVNL 268          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER23_ARATH (Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=2 SV=1)

HSP 1 Score: 216.468 bits (550), Expect = 1.470e-55
Identity = 110/253 (43.48%), Postives = 157/253 (62.06%), Query Frame = 1
Query:   85 LILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSL-KNMVALAGGHTVGKARCTSFRGHIYN-------DSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNLL 819
            LI+  +      +N+QL  ++Y  TCP   +I+   I+  ++ + R+ ASLLRLHFHDCFV GCD S+LLD++ +F  EK A PN NS RGF+V+D++KA +E+ACPR VSCADI+ IA++ SV++ GGP W V LG               +P P S L+ L ++F+  GL+   ++VAL+GGHT GKA+C      +YN       D +++ ++   L++ CP+ GN  VL N D  TPT FD  YY NLL
Sbjct:   15 LIVGCLLLQASNSNAQLRPDFYFRTCPPIFNIIGDTIVNELRTDPRIAASLLRLHFHDCFVRGCDASILLDNSTSFRTEKDAAPNKNSVRGFDVIDRMKAAIERACPRTVSCADIITIASQISVLLSGGPWWPVPLGRRDSVEAFFALANTALPSPFSTLTQLKTAFADVGLNRPSDLVALSGGHTFGKAQCQFVTPRLYNFNGTNRPDPSLNPTYLVELRRLCPQNGNGTVLVNFDSVTPTTFDRQYYTNLL 267          
The following BLAST results are available for this feature:
BLAST of CK938373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
PER32_ARATH3.164e-5847.08Peroxidase 32 OS=Arabidopsis thaliana GN=PER32 PE=... [more]
PER59_ARATH3.499e-5748.74Peroxidase 59 OS=Arabidopsis thaliana GN=PER59 PE=... [more]
PERN_ARMRU5.968e-5747.64Peroxidase N OS=Armoracia rusticana GN=HRPN PE=2 S... [more]
PER2_ZINEL2.962e-5648.50Basic peroxidase OS=Zinnia elegans GN=POD3 PE=1 SV... [more]
PER1_ZINEL2.962e-5648.50Basic peroxidase OS=Zinnia elegans GN=POD1 PE=1 SV... [more]
PER4_ARATH6.598e-5644.58Peroxidase 4 OS=Arabidopsis thaliana GN=PER4 PE=2 ... [more]
PERE5_ARMRU8.617e-5645.99Peroxidase E5 OS=Armoracia rusticana GN=HRPE5 PE=1... [more]
PER5_ARATH8.617e-5643.43Peroxidase 5 OS=Arabidopsis thaliana GN=PER5 PE=2 ... [more]
PER33_ARATH1.470e-5545.00Peroxidase 33 OS=Arabidopsis thaliana GN=PER33 PE=... [more]
PER23_ARATH1.470e-5543.48Peroxidase 23 OS=Arabidopsis thaliana GN=PER23 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004443_F11 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IVF_F11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938373 ID=CK938373; Name=CK938373; organism=Citrus sinensis; type=EST; length=820bp
GGGACGTATTTATAAAGGCAAAAATCTCTCTTGACGACTGCAGAAGTGCT
AGATATGGCAGCAACAAGTTACTACTTTCTCCTTCTTATACTTACTTTTG
TCACTGCAACTCTTGATCAAGCCAACTCCCAACTCTCAACAAACTACTAC
AAATCCACATGCCCAAAAGCATTGTCTATTGTTCGGGCAGGGATTATAGC
TGCTATAAAAAATGAAACACGCGTAGGGGCGTCTTTACTTCGACTTCATT
TCCACGACTGCTTTGTCAATGGCTGCGATGGATCGGTACTGTTGGATGAT
ACGGCCAATTTCATAGGAGAGAAAACAGCAGTTCCTAACAATAACTCGGC
CAGAGGGTTCAACGTGGTGGATCAGATTAAAGCTAATCTGGAGAAAGCAT
GCCCCCGTGTTGTTTCGTGTGCAGATATTCTTGCCATTGCCACACGCGAT
TCAGTTGTTGTTTTCGGAGGTCCTTCATGGAAAGTTAGATTGGGAAGAAG
AGATTCTACCACTGCTAGCAGGGCAGCGGCAAATACCTCCATCCCTCCAC
CCACTTCTAATTTGAGTGCTCTCATATCAAGCTTCTCGGCACAGGGTCTC
TCATTAAAGAACATGGTGGCTCTTGCTGGTGGACATACGGTAGGCAAGGC
AAGGTGCACATCATTTCGAGGACACATTTACAACGATTCCAATATTGACA
CCAGCTTCGCCAGGTCCTTGCAGCAGAGATGCCCAAGAAGAGGAAATGAC
AATGTTCTGGCAAACCTTGACCGTCAAACTCCAACGTGCTTTGACAATTT
ATATTACAAGAATCTGTTGA
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