CK938373

Overview
NameCK938373
Unique NameCK938373
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length820
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10319 contig Csv1_Contig10319:120..939. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER62_ARATH (Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.519e-39
Identity = 95/251 (37.85%), Postives = 134/251 (53.39%), Query Frame = 1
Query:   85 LILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVAL-AGGHTVGKARCTSFRGHIYN------DSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNL 816
            L++ F++  +          +Y +TCP A +IVR  + +   ++ +V   LLR+H HDCFV GCDGSVLL    +   E+TA  N N   GF V+D  K  LE ACP VVSCADILA+A RDSV +  G SW+V  G               +P P+ +L+     FSA  L+ +++V L  GGHT+G A C      I+N      D  +D +F   LQ+ CP+ G+ +   +LD  +   FD  Y+ NL
Sbjct:    9 LVIVFLSCLIAVYGQGTRIGFYSTTCPNAETIVRTTVASHFGSDPKVAPGLLRMHNHDCFVQGCDGSVLLSGPNS---ERTAGANVN-LHGFEVIDDAKRQLEAACPGVVSCADILALAARDSVSLTNGQSWQVPTG-RRDGRVSLASNVNNLPSPSDSLAIQQRKFSAFRLNTRDLVTLVGGGHTIGTAACGFITNRIFNSSGNTADPTMDQTFVPQLQRLCPQNGDGSARVDLDTGSGNTFDTSYFINL 254          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER51_ARATH (Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=2 SV=1)

HSP 1 Score: 162.54 bits (410), Expect = 2.519e-39
Identity = 98/256 (38.28%), Postives = 137/256 (53.52%), Query Frame = 1
Query:   79 LLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSAR-GFNVVDQIKANLEKA--CPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYN-------DSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNL 816
            LLLIL+   A ++ +++QL  ++Y  TCP    IVR  +   I+       + LRL+FHDCFVNGCD SV++  T     EK    N + A  GF+ V + K  ++    C   VSCADIL +ATRD V + GGP + V LG               +P PT +L+ L + F+  GLS  +M+AL+G HT+G A CT     +YN       D  I+  +   L+  CP+  +  V  N+D  TP  FDN+YYKNL
Sbjct:   10 LLLILSLFLA-INLSSAQLRGDFYAGTCPNVEQIVRNAVQKKIQQTFTTIPATLRLYFHDCFVNGCDASVMIASTNTNKAEKDHEDNLSLAGDGFDTVIKAKEAVDAVPNCRNKVSCADILTMATRDVVNLAGGPQYAVELGRRDGLSSSASSVTGKLPKPTFDLNQLNALFAENGLSPNDMIALSGAHTLGFAHCTKVFNRLYNFNKTNNVDPTINKDYVTELKASCPQNIDPRVAINMDPNTPRQFDNVYYKNL 264          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER7_ARATH (Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.297e-39
Identity = 95/245 (38.78%), Postives = 137/245 (55.92%), Query Frame = 1
Query:  103 TATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYN-------DSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNL 816
            T +L   ++ LS NYY   CP    IV   +    K+++ +G +LLRL FHDC V GCD SVLLD    + G +   P + + RGF ++D IK+ +EK+CP  VSCADIL  A+R + V  GGP W    G               +P    +++AL+ +F + GL++ ++V L+G HT+GKA C + +  +YN       D +ID  +A  LQ+RC R  ++ V  +LD  TP  FDN YY NL
Sbjct:   41 TKSLFPLDNLLSLNYYDRICPDFEKIVVTKVREWTKSDSSLGPALLRLIFHDCGVTGCDASVLLD----YEGTERRSPASKTLRGFELIDDIKSEMEKSCPGKVSCADILTSASRAATVQLGGPYWPNVYG-RRDSKHSYARDVEKVPSGRRDVTALLETFQSYGLNVLDLVVLSGAHTIGKASCGTIQSRLYNYNATSGSDPSIDAKYADYLQRRC-RWASETV--DLDPVTPAVFDNQYYINL 277          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER69_ARATH (Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=1 SV=1)

HSP 1 Score: 161.77 bits (408), Expect = 4.297e-39
Identity = 98/263 (37.26%), Postives = 140/263 (53.23%), Query Frame = 1
Query:   73 YFLLLILTFVTATLDQANSQLSTN--------YYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYN-------DSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNL 816
            + L+  L  V A   Q N   ++         +Y + C    SIVR+ + + +++       +LR+HFHDCFV+GCDGSVLL   A    E+TAVPN  S RGF V+++ KA LEKACPR VSCADIL +A RD+VV+ GG  W+V LG               +P P+ +++     F+A+ L+  ++V L GGHT+G A C   RG   N       D +ID SF   +  +CP+ G   V   LD  +   FD  + + +
Sbjct:    9 FVLVTFLVLVAAVTAQGNRGSNSGGGRRPHVGFYGNRCRNVESIVRSVVQSHVRSIPANAPGILRMHFHDCFVHGCDGSVLL---AGNTSERTAVPNR-SLRGFEVIEEAKARLEKACPRTVSCADILTLAARDAVVLTGGQRWEVPLG--RLDGRISQASDVNLPGPSDSVAKQKQDFAAKTLNTLDLVTLVGGHTIGTAGCGLVRGRFVNFNGTGQPDPSIDPSFVPLILAQCPQNGGTRV--ELDEGSVDKFDTSFLRKV 263          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER44_ARATH (Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=2 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 5.612e-39
Identity = 94/249 (37.75%), Postives = 138/249 (55.42%), Query Frame = 1
Query:   64 TSYYFLLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVAL-AGGHTVGKARCTSFRGHIYNDSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYY 807
            T+ +FL   L         A +QL T +Y  +CP+A SIV + +    +++  + A+ LR+ FHDCFV GCD S+L+D       EK+  P N S RG+ ++D+ K  LE ACPR VSCADI+ +ATRDSV + GGP + V  G               +P PT  +SA I  F+AQG++  +MV L  GGH+VG A C+ F+  + +D  ++ S   SL+++C    +      LD++T    DN  Y
Sbjct:    5 TALFFLFCFLA------PSALAQLRTGFYSRSCPRAESIVASVVANRFRSDKSITAAFLRMQFHDCFVRGCDASLLIDPRPGRPSEKSTGP-NASVRGYEIIDEAKRQLEAACPRTVSCADIVTLATRDSVALAGGPRFSVPTG--RRDGLRSNPNDVNLPGPTIPVSASIQLFAAQGMNTNDMVTLIGGGHSVGVAHCSLFQDRL-SDRAMEPSLKSSLRRKCSSPNDPTTF--LDQKTSFTVDNAIY 241          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER16_ARATH (Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=1 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 5.612e-39
Identity = 96/261 (36.78%), Postives = 141/261 (54.02%), Query Frame = 1
Query:   64 TSYYFLLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSAR-GFNVVDQIKANLEKA--CPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYN-------DSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNL 816
            +S+  + L+L F ++++    +QL TN+Y+ +CP   +IVR  +    +       + LRL FHDCFV GCD S+LL   +    EK    + + A  GF+ V + K  L++   C   VSCADILA+ATRD VV+ GGP++ V LG               +P P+  L  L + F+  GLS  +M+AL+G HT+G A C  F   IYN       D  ++  +A  L+Q CP R +  +  N+D  +P  FDN Y+KNL
Sbjct:    5 SSFSIVALLLIFFSSSVF---AQLQTNFYRKSCPNVETIVRNAVRQKFQQTFVTAPATLRLFFHDCFVRGCDASILLASPS----EKDHPDDKSLAGDGFDTVAKAKQALDRDPNCRNKVSCADILALATRDVVVLTGGPNYPVELGRRDGRLSTVASVQHSLPQPSFKLDQLNTMFARHGLSQTDMIALSGAHTIGFAHCGKFSKRIYNFSPKRPIDPTLNIRYALQLRQMCPIRVDLRIAINMDPTSPNTFDNAYFKNL 258          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER47_ARATH (Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.329e-39
Identity = 90/229 (39.30%), Postives = 131/229 (57.21%), Query Frame = 1
Query:  133 LSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHI-YNDSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNL 816
            LS  YY  +CP A  IV+  +  A++ +  + A L+R+ FHDCF+ GCD S+LLD T +   EK + P N S RG+ ++D  K  +E  CP VVSCADI+A+A RD+V   GGP + +  G               +P P  N S LI +F  +G + +++VAL+G HT+G ARC+SF+  +   DS++D++FA +L + C     DN     D  T   FDN Y+  L
Sbjct:   26 LSMTYYMMSCPFAEQIVKNSVNNALQADPTLAAGLIRMLFHDCFIEGCDASILLDSTKDNTAEKDS-PANLSLRGYEIIDDAKEKIENRCPGVVSCADIVAMAARDAVFWAGGPYYDIPKG-RFDGKRSKIEDTRNLPSPFLNASQLIQTFGQRGFTPQDVVALSGAHTLGVARCSSFKARLTVPDSSLDSTFANTLSKTC--SAGDNAEQPFD-ATRNDFDNAYFNAL 249          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER41_ARATH (Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 7.329e-39
Identity = 96/251 (38.25%), Postives = 133/251 (52.99%), Query Frame = 1
Query:   79 LLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARG--FNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYN--DSNIDTSFARSLQQRCPR-RGNDNVLANLDRQTPTCFDNLYYKNL 816
            L ++L FV +        L+ +YY+ TCP    IVR  +      +    A  LRL FHDCF+ GCD SVL+  T +F   +     N S  G  F++V +IK  LE +CP VVSCADILA ATRD V + GGP ++V+LG               +P    ++  ++S F   G +LK +VAL+GGHT+G + C  F   I+   D  ++  FA  L+  C     N  + A LD  TP  FDN+Y+KNL
Sbjct:    8 LFVVLVFVPSIYSAPPPNLTKDYYQKTCPDFNKIVRETVTPKQGQQPTTAAGTLRLFFHDCFMEGCDASVLIA-TNSFNKAERDDDLNESLPGDAFDIVTRIKTALELSCPGVVSCADILAQATRDLVTMVGGPFYEVKLGRKDGFESKAHKVKGNLPLANQSVPDMLSIFKKNGFTLKELVALSGGHTIGFSHCKEFSNRIFPKVDPELNAKFAGVLKDLCKNFETNKTMAAFLDPVTPGKFDNMYFKNL 257          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER73_ARATH (Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=1 SV=1)

HSP 1 Score: 159.844 bits (403), Expect = 1.633e-38
Identity = 95/264 (35.98%), Postives = 138/264 (52.27%), Query Frame = 1
Query:   55 MAATSYYFLLLILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSAR-GFNVVDQIKANLEK--ACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYN-------DSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNL 816
            MA  S   ++ +   ++   D   +QL TN+Y ++CP    IV+  +   IK       + LRL FHDCFVNGCD SV++  T     EK    N + A  GF+VV + K  L+   +C   VSCADILA+ATRD VV   GPS+ V LG               +P P + ++ L   F+   L+ ++M+AL+  HT+G A C      IYN       D  ++ ++A+ LQ  CP+  +  +  N+D  TP  FDN+Y+KNL
Sbjct:    1 MARFSLVVVVTLSLAISMFPDTTTAQLKTNFYGNSCPNVEQIVKKVVQEKIKQTFVTIPATLRLFFHDCFVNGCDASVMIQSTPTNKAEKDHPDNISLAGDGFDVVIKAKKALDAIPSCKNKVSCADILALATRDVVVAAKGPSYAVELGRFDGLVSTAASVNGNLPGPNNKVTELNKLFAKNKLTQEDMIALSAAHTLGFAHCGKVFNRIYNFNLTHAVDPTLNKAYAKELQLACPKTVDPRIAINMDPTTPRQFDNIYFKNL 264          
BLAST of CK938373 vs. ExPASy Swiss-Prot
Match: PER43_ARATH (Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=2 SV=2)

HSP 1 Score: 159.073 bits (401), Expect = 2.785e-38
Identity = 89/251 (35.46%), Postives = 139/251 (55.38%), Query Frame = 1
Query:   85 LILTFVTATLDQANSQLSTNYYKSTCPKALSIVRAGIIAAIKNETRVGASLLRLHFHDCFVNGCDGSVLLDDTANFIGEKTAVPNNNSARGFNVVDQIKANLEKACPRVVSCADILAIATRDSVVVFGGPSWKVRLGXXXXXXXXXXXXXXXIPPPTSNLSALISSFSAQGLSLKNMVALAGGHTVGKARCTSFRGHIYN-------DSNIDTSFARSLQQRCPRRGNDNVLANLDRQTPTCFDNLYYKNL 816
            L L+ VT     + + L   +Y +TCP+A SIV+  +  A  ++  + A LLRLHFHDCFV GCDGS+L+++ A  I EK A   +   RGF +V+ +KA LE ACP VVSC+DI+A+A RD++ +  GP+++V  G               +P  + ++  L + F  +GL+ K++V L+  HT+G   C      +Y+       D  I+ +F   L  +CP+ G+ NV   +DR +   FD    +N+
Sbjct:   10 LALSLVTVFFGISLANLEVGFYSNTCPQAESIVKRVVSGAALSDPNLPAILLRLHFHDCFVEGCDGSILVNNGA--ISEKNAF-GHEGVRGFEIVEAVKAELEAACPGVVSCSDIVALAARDAISLANGPAYEVPTG-RRDGRVSNMSLAKDMPEVSDSIEILKAKFMQKGLNAKDLVLLSAAHTIGTTACFFMSKRLYDFLPGGQPDPTINPTFLPELTTQCPQNGDINVRLPIDRFSERLFDKQILQNI 256          
The following BLAST results are available for this feature:
BLAST of CK938373 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 110
Match NameE-valueIdentityDescription
PER62_ARATH2.519e-3937.85Peroxidase 62 OS=Arabidopsis thaliana GN=PER62 PE=... [more]
PER51_ARATH2.519e-3938.28Peroxidase 51 OS=Arabidopsis thaliana GN=PER51 PE=... [more]
PER7_ARATH4.297e-3938.78Peroxidase 7 OS=Arabidopsis thaliana GN=PER7 PE=2 ... [more]
PER69_ARATH4.297e-3937.26Peroxidase 69 OS=Arabidopsis thaliana GN=PER69 PE=... [more]
PER44_ARATH5.612e-3937.75Peroxidase 44 OS=Arabidopsis thaliana GN=PER44 PE=... [more]
PER16_ARATH5.612e-3936.78Peroxidase 16 OS=Arabidopsis thaliana GN=PER16 PE=... [more]
PER47_ARATH7.329e-3939.30Peroxidase 47 OS=Arabidopsis thaliana GN=PER47 PE=... [more]
PER41_ARATH7.329e-3938.25Peroxidase 41 OS=Arabidopsis thaliana GN=PER41 PE=... [more]
PER73_ARATH1.633e-3835.98Peroxidase 73 OS=Arabidopsis thaliana GN=PER73 PE=... [more]
PER43_ARATH2.785e-3835.46Peroxidase 43 OS=Arabidopsis thaliana GN=PER43 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004443_F11 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IVF_F11 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938373 ID=CK938373; Name=CK938373; organism=Citrus sinensis; type=EST; length=820bp
GGGACGTATTTATAAAGGCAAAAATCTCTCTTGACGACTGCAGAAGTGCT
AGATATGGCAGCAACAAGTTACTACTTTCTCCTTCTTATACTTACTTTTG
TCACTGCAACTCTTGATCAAGCCAACTCCCAACTCTCAACAAACTACTAC
AAATCCACATGCCCAAAAGCATTGTCTATTGTTCGGGCAGGGATTATAGC
TGCTATAAAAAATGAAACACGCGTAGGGGCGTCTTTACTTCGACTTCATT
TCCACGACTGCTTTGTCAATGGCTGCGATGGATCGGTACTGTTGGATGAT
ACGGCCAATTTCATAGGAGAGAAAACAGCAGTTCCTAACAATAACTCGGC
CAGAGGGTTCAACGTGGTGGATCAGATTAAAGCTAATCTGGAGAAAGCAT
GCCCCCGTGTTGTTTCGTGTGCAGATATTCTTGCCATTGCCACACGCGAT
TCAGTTGTTGTTTTCGGAGGTCCTTCATGGAAAGTTAGATTGGGAAGAAG
AGATTCTACCACTGCTAGCAGGGCAGCGGCAAATACCTCCATCCCTCCAC
CCACTTCTAATTTGAGTGCTCTCATATCAAGCTTCTCGGCACAGGGTCTC
TCATTAAAGAACATGGTGGCTCTTGCTGGTGGACATACGGTAGGCAAGGC
AAGGTGCACATCATTTCGAGGACACATTTACAACGATTCCAATATTGACA
CCAGCTTCGCCAGGTCCTTGCAGCAGAGATGCCCAAGAAGAGGAAATGAC
AATGTTCTGGCAAACCTTGACCGTCAAACTCCAACGTGCTTTGACAATTT
ATATTACAAGAATCTGTTGA
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