CK938364
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK938364 vs. ExPASy Swiss-Prot
Match: H31_ENCCU (Histone H3.1 OS=Encephalitozoon cuniculi GN=HHT1 PE=3 SV=3) HSP 1 Score: 159.844 bits (403), Expect = 1.571e-38 Identity = 81/128 (63.28%), Postives = 100/128 (78.12%), Query Frame = 3 Query: 57 MARTKQTARKSTGGKAPRKQLATKAARKS-APTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFK--TDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDI 431 MARTKQ+ARK+TGGKAPRKQL+ K+ARK +P + K RYRPG+VAL+EIR+YQKST+ LIR+LPFQR R + ++ TD+RFQ A+ ++QEA E YLVGLFED LCA HAKRVT+ PKDI Sbjct: 1 MARTKQSARKTTGGKAPRKQLSAKSARKGVSPASSAGAKKSRYRPGSVALKEIRRYQKSTDFLIRRLPFQRACRSVVKECSNATDIRFQGPALASIQEALEVYLVGLFEDAMLCAYHAKRVTVFPKDI 128
BLAST of CK938364 vs. ExPASy Swiss-Prot
Match: H3L3_LILLO (Histone H3-like 3 OS=Lilium longiflorum GN=leH3 PE=2 SV=3) HSP 1 Score: 148.288 bits (373), Expect = 4.729e-35 Identity = 85/149 (57.05%), Postives = 97/149 (65.10%), Query Frame = 3 Query: 57 MARTKQTARKSTGGKAPRKQLATKAARKSAPTT-----------------------GGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 434 MAR K AR STGGKAPRKQLA KA RK+AP T GVK+PHRYRPG + LREIRKY+K+ I KLPF RLVR+I Q+ K LRFQS A+ A +E +EAYLV LFED AIHAKRVT++PKDIQ Sbjct: 1 MARMKLNARMSTGGKAPRKQLAYKAVRKAAPPTIGVKLPNSYRPGDQTVCKPAPPTDGVKEPHRYRPGKMGLREIRKYKKNARFFISKLPFHRLVRKITQNLKAHLRFQSTAMPAPEEVSEAYLVKLFED----AIHAKRVTLVPKDIQ 145
BLAST of CK938364 vs. ExPASy Swiss-Prot
Match: H3_ENTHI (Histone H3 OS=Entamoeba histolytica GN=H3 PE=3 SV=2) HSP 1 Score: 141.354 bits (355), Expect = 5.781e-33 Identity = 82/127 (64.57%), Postives = 91/127 (71.65%), Query Frame = 3 Query: 57 MARTK-QTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 434 MARTK R S K +A KAA+K KK R PG VAL EI+ Q+STELL+RK PFQ LVREIAQ K+DLRFQS A+ ALQEAAEAYLVGLFEDTNLCAIHAKR+TIMPKD+Q Sbjct: 1 MARTKGHIERPSNKSAKAVKNVAFKAAKKMLSKDSTKKK--RAHPGAVALTEIKVLQRSTELLLRKAPFQALVREIAQVSKSDLRFQSAAISALQEAAEAYLVGLFEDTNLCAIHAKRITIMPKDMQ 125
BLAST of CK938364 vs. ExPASy Swiss-Prot
Match: H33_HORVU (Histone H3.3 (Fragment) OS=Hordeum vulgare PE=3 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.894e-32 Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 3 Query: 225 KSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 434 KSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ Sbjct: 1 KSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 70
BLAST of CK938364 vs. ExPASy Swiss-Prot
Match: CENPA_NEUCR (Histone H3-like centromeric protein cse-4 OS=Neurospora crassa GN=cse-4 PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.685e-30 Identity = 72/135 (53.33%), Postives = 95/135 (70.37%), Query Frame = 3 Query: 57 MARTKQTARKSTGGKAP------RKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKT---DLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 434 + ++K ++K+ P R++ + + P G K+ RYRPGT+AL+EIR YQ++T+LL+ KLPF RLVREIA F+ ++R+QS A+LALQEAAEA+LV LFEDTNLCAIHAKRVTIM KDIQ Sbjct: 8 VTKSKAVSKKAAAVPTPKATPPGRRKSRASSVQPGDPVPQGKKR--RYRPGTLALKEIRNYQRTTDLLVAKLPFARLVREIAMQFRPMDEEMRWQSQAILALQEAAEAFLVHLFEDTNLCAIHAKRVTIMQKDIQ 140
BLAST of CK938364 vs. ExPASy Swiss-Prot
Match: H3_LEIIN (Histone H3 OS=Leishmania infantum PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.983e-30 Identity = 72/127 (56.69%), Postives = 91/127 (71.65%), Query Frame = 3 Query: 57 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHR-YRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 434 M+RTK+TAR ++ + +K ++K+ GVK+ HR +RPGT A+REIRK+QKST LLI+ PFQRLVR + + K LRFQS A++ALQEA EAY+V L DTNL IHAKRVTI PKDIQ Sbjct: 1 MSRTKETARA-------KRTITSKKSKKAPSGASGVKRSHRRWRPGTCAIREIRKFQKSTSLLIQCAPFQRLVRGVERQ-KEGLRFQSSAIMALQEATEAYIVSLMADTNLACIHAKRVTIQPKDIQ 119
BLAST of CK938364 vs. ExPASy Swiss-Prot
Match: H3L_ENCCU (Histone H3-like protein OS=Encephalitozoon cuniculi GN=ECU09_0450 PE=3 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 1.020e-29 Identity = 69/128 (53.91%), Postives = 93/128 (72.66%), Query Frame = 3 Query: 57 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTG---GVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDI 431 M+RTKQTA K+ GGKAPRK ++ K S P++G + K R++ G +AL+EIRKYQKST+LLIRK PFQR+VR++ + + +RFQ+ A++A QEA E +L L ED C +HAKRVT+MPKDI Sbjct: 1 MSRTKQTASKALGGKAPRKGISAK----SIPSSGCSPAMPKRTRFKAGALALKEIRKYQKSTDLLIRKRPFQRMVRDLCKG-REGVRFQASAIVAFQEAVENFLTSLMEDAYRCVLHAKRVTLMPKDI 123
BLAST of CK938364 vs. ExPASy Swiss-Prot
Match: CENPA_CANAL (Histone H3-like centromeric protein CSE4 OS=Candida albicans GN=CSE4 PE=3 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 2.273e-29 Identity = 71/98 (72.45%), Postives = 81/98 (82.65%), Query Frame = 3 Query: 150 TTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDF---KTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 434 T VKK RYRPGT ALREIR+YQKST+LLIRKLPF RLVREI+ DF LR+QS+A+LALQEA+E++L+ L EDTNLCAIHAKRVTIM KDIQ Sbjct: 104 TVPRVKK--RYRPGTKALREIRQYQKSTDLLIRKLPFARLVREISLDFVGPSYGLRWQSNAILALQEASESFLIHLLEDTNLCAIHAKRVTIMQKDIQ 199
BLAST of CK938364 vs. ExPASy Swiss-Prot
Match: CENPA_DANRE (Histone H3-like centromeric protein A OS=Danio rerio GN=cenpa PE=1 SV=1) HSP 1 Score: 127.102 bits (318), Expect = 1.128e-28 Identity = 65/125 (52.00%), Postives = 86/125 (68.80%), Query Frame = 3 Query: 63 RTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTD-LRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 434 R T R+ + + ++ R S P+ +K H++RPGT AL EIRKYQKST LL+RK PF RLVRE+ Q F + + +Q +A++ALQEAAEA++V LF D NLCAIHAKRVT+ P+DIQ Sbjct: 10 RKPSTPRRRSPPASLPPPAGSRTRRHSGPSGSSPRKKHKFRPGTRALMEIRKYQKSTGLLLRKAPFSRLVREVCQMFSREHMMWQGYALMALQEAAEAFMVRLFSDANLCAIHAKRVTLFPRDIQ 134
BLAST of CK938364 vs. ExPASy Swiss-Prot
Match: CENPA_PICFA (Histone H3-like centromeric protein CSE4 OS=Pichia farinosa GN=CSE4 PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 2.513e-28 Identity = 65/89 (73.03%), Postives = 77/89 (86.52%), Query Frame = 3 Query: 177 RYRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDF---KTDLRFQSHAVLALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQ 434 RYRPGT ALREIR+YQ+S+ELLIRKLPF RLV+E+A+++ +R+QS+AVLALQEA EA+LV L EDTNLCAIHAKRVTIM KDIQ Sbjct: 61 RYRPGTKALREIRRYQRSSELLIRKLPFARLVKEVAENYIGADYGIRWQSNAVLALQEACEAFLVHLLEDTNLCAIHAKRVTIMQKDIQ 149 The following BLAST results are available for this feature:
BLAST of CK938364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 211
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Sequences
The
following sequences are available for this feature:
EST sequence >CK938364 ID=CK938364; Name=CK938364; organism=Citrus sinensis; type=EST; length=803bpback to top |