CK938364

Overview
NameCK938364
Unique NameCK938364
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length803
Libraries
Library NameType
Developing fruit albedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1030 contig Csv1_Contig1030:350..1149. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CK938364 vs. ExPASy Swiss-Prot
Match: H32_TETBO (Histone H3.2 (Fragment) OS=Tetrahymena borealis PE=3 SV=2)

HSP 1 Score: 74.7146 bits (182), Expect = 6.645e-13
Identity = 35/41 (85.37%), Postives = 38/41 (92.68%), Query Frame = 3 
Query:   57 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHR 179
            MAR KQTARKSTG +APRKQLA+KAARKSAP TGG+KKPHR
Sbjct:    1 MARAKQTARKSTGAEAPRKQLASKAARKSAPATGGIKKPHR 41
The following BLAST results are available for this feature:
BLAST of CK938364 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
H32_TETBO6.645e-1385.37Histone H3.2 (Fragment) OS=Tetrahymena borealis PE... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004443_G10 Developing fruit albedo at 165 DAFB Citrus sinensis cDNA clone A1650001_IVF_G10 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938364 ID=CK938364; Name=CK938364; organism=Citrus sinensis; type=EST; length=803bp
GGGAACGCGAATTTTTAGAGAGAGAAATTGAGTAGAGGAGTTGAAGAAAC
TCAGAGATGGCCCGTACCAAGCAAACTGCACGTAAGTCAACCGGAGGAAA
GGCTCCTAGGAAGCAACTTGCTACCAAGGCCGCCCGTAAGTCTGCGCCCA
CCACCGGTGGTGTTAAGAAGCCTCATCGTTACCGTCCTGGAACCGTCGCC
CTTCGAGAAATTCGCAAGTACCAGAAGAGTACCGAGCTGCTTATCAGGAA
ACTCCCATTCCAGAGACTTGTTCGTGAAATTGCTCAGGACTTTAAGACTG
ATCTGCGTTTCCAGAGCCATGCAGTGCTGGCCCTGCAGGAGGCAGCGGAG
GCTTACCTTGTTGGTCTCTTCGAGGACACTAACCTCTGCGCCATTCATGC
AAAGCGTGTCACTATTATGCCCAAGGACATACAGCTTGCCCGTAGGATCC
GTGGCGAGCGTGCTTAAGCGTAATTGCTGGTTGCTTCAATTTGAATGACT
GGAAGGGAAGGGGGCAGTTGTAATGTGTTAATTTGTACGTGGGGGTTGGT
GGGGGGGTAGATAGGGGTAGGATTCCAGTAGTTATTAGAATATGGCTTTT
GTCATCATCTGGGTTTGTTTTTGGTGGTGTTTTATAATGTCTATTTGTTG
ATGATGGGGATTTTAATTCGCCATAAGAGACTGGCTTTTATGTGTTCTTT
TGGATATCTGTTGCCACAGTAGTGGTGGTGTTGAACATCTCTATTATTTT
GCATCTAATCTAAGTTTAGTTTGTTANNNAAAAAAAAAAAAAAAAAAAAA
AAA
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