CX675471

Overview
NameCX675471
Unique NameCX675471
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length580
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675471 vs. ExPASy Swiss-Prot
Match: ALDOA_MOUSE (Fructose-bisphosphate aldolase A OS=Mus musculus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 7.065e-33
Identity = 75/139 (53.96%), Postives = 93/139 (66.91%), Query Frame = -2
Query:  166 GTLLKPNMVTPGSE-VPKVTPDVNAEHTVRALQRTTPAAVPAAVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 579
            GTLLKPNMVTPG     K + +  A  TV AL+RT P AV    FLSGGQSEEEA+ NLNA+N+    KPW+L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL + ++ Y
Sbjct:  226 GTLLKPNMVTPGHACTQKFSNEEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYIKRALANSLACQGKYTPSGQSGAAASESLFISNHAY 364          
BLAST of CX675471 vs. ExPASy Swiss-Prot
Match: ALDOA_HUMAN (Fructose-bisphosphate aldolase A OS=Homo sapiens GN=ALDOA PE=1 SV=2)

HSP 1 Score: 140.198 bits (352), Expect = 7.065e-33
Identity = 76/139 (54.68%), Postives = 93/139 (66.91%), Query Frame = -2
Query:  166 GTLLKPNMVTPGSE-VPKVTPDVNAEHTVRALQRTTPAAVPAAVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 579
            GTLLKPNMVTPG     K + +  A  TV AL+RT P AV    FLSGGQSEEEA+ NLNA+N+    KPW+L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL V ++ Y
Sbjct:  226 GTLLKPNMVTPGHACTQKFSHEEIAMATVTALRRTVPPAVTGITFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364          
BLAST of CX675471 vs. ExPASy Swiss-Prot
Match: ALDOB_CHICK (Fructose-bisphosphate aldolase B OS=Gallus gallus GN=ALDOB PE=3 SV=3)

HSP 1 Score: 139.813 bits (351), Expect = 9.227e-33
Identity = 78/139 (56.12%), Postives = 85/139 (61.15%), Query Frame = -2
Query:  166 GTLLKPNMVTPGSEVPK-VTPDVNAEHTVRALQRTTPAAVPAAVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 579
            GTLLKPNMVT G   PK  TP   A  TV  L RT PAAVP   FLSGGQSEEEA+ NLNAMNQ    KPW L+FS+GRALQ S L AW GK EN + AQ AF  R + NS A  G Y    +    A +SL    Y Y
Sbjct:  226 GTLLKPNMVTAGHSCPKKYTPQDVAVATVTTLLRTVPAAVPGICFLSGGQSEEEASLNLNAMNQSPLPKPWKLTFSYGRALQASALAAWLGKSENKKAAQEAFCKRAQINSLACRGQYVTSGKTDTAATQSLFTASYTY 364          
BLAST of CX675471 vs. ExPASy Swiss-Prot
Match: ALFC_ORYSJ (Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 1.574e-32
Identity = 75/139 (53.96%), Postives = 95/139 (68.35%), Query Frame = -2
Query:  166 GTLLKPNMVTPGSEVP-KVTPDVNAEHTVRALQRTTPAAVPAAVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 579
            G LLKP+MVTPG+E   + TP+  +++T++ L R  P AVP  +FLSGGQSE EAT+NLNAMNQ     PW +SFS+ RALQ + LK W G+ ENV+ AQ A L+R KANS A LG Y  D +  E A E + VK+Y Y
Sbjct:  253 GILLKPSMVTPGAECKDRATPEQVSDYTLKLLHRRIPPAVPGIMFLSGGQSEVEATQNLNAMNQ--GPNPWHVSFSYARALQNTCLKTWGGQPENVKAAQDALLLRAKANSLAQLGKYTSDGEAAE-AKEGMFVKNYVY 388          
BLAST of CX675471 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 139.043 bits (349), Expect = 1.574e-32
Identity = 76/139 (54.68%), Postives = 92/139 (66.19%), Query Frame = -2
Query:  166 GTLLKPNMVTPGSEVP-KVTPDVNAEHTVRALQRTTPAAVPAAVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 579
            G LLKP+MVTPG+E   + TP+  A +T++ L+   P AVP  +FLSGGQSE EAT NLNAMNQ     PW +SFS+ RALQ + LK W GKEENV+ AQ   L R KANS A LG Y G+ +  E A E + VK Y Y
Sbjct:  264 GILLKPSMVTPGAEATDRATPEQVASYTLKLLRNRIPPAVPGIMFLSGGQSELEATLNLNAMNQ--APNPWHVSFSYARALQNTCLKTWGGKEENVKAAQDILLARAKANSLAQLGKYTGEGE-SEEAKEGMFVKGYTY 399          
BLAST of CX675471 vs. ExPASy Swiss-Prot
Match: ALDOB_BOVIN (Fructose-bisphosphate aldolase B OS=Bos taurus GN=ALDOB PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 2.056e-32
Identity = 76/139 (54.68%), Postives = 85/139 (61.15%), Query Frame = -2
Query:  166 GTLLKPNMVTPGSE-VPKVTPDVNAEHTVRALQRTTPAAVPAAVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 579
            GTLLKPNMVT G     K TP+  A  TV AL RT PAAVP   FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK EN +  Q AF+ R  ANS+A  G Y      G  + +SL    Y Y
Sbjct:  226 GTLLKPNMVTAGHACTKKYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKTTQEAFMKRALANSQAAKGQYVHMGSSGSASTQSLFTASYTY 364          
BLAST of CX675471 vs. ExPASy Swiss-Prot
Match: ALDOA_PONAB (Fructose-bisphosphate aldolase A OS=Pongo abelii GN=ALDOA PE=2 SV=3)

HSP 1 Score: 138.658 bits (348), Expect = 2.056e-32
Identity = 75/139 (53.96%), Postives = 92/139 (66.19%), Query Frame = -2
Query:  166 GTLLKPNMVTPGSE-VPKVTPDVNAEHTVRALQRTTPAAVPAAVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 579
            GTLLKPNMVTPG     K + +     TV AL+RT P AV    FLSGGQSEEEA+ NLNA+N+    KPW+L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL V ++ Y
Sbjct:  226 GTLLKPNMVTPGHACTQKFSHEEIVMATVTALRRTVPPAVTGITFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFVSNHAY 364          
BLAST of CX675471 vs. ExPASy Swiss-Prot
Match: ALF1_LAMJA (Fructose-bisphosphate aldolase, muscle type OS=Lampetra japonica PE=2 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 2.685e-32
Identity = 75/139 (53.96%), Postives = 95/139 (68.35%), Query Frame = -2
Query:  166 GTLLKPNMVTPGSEVPKVT-PDVNAEHTVRALQRTTPAAVPAAVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 579
            GTLLKPNMVT G+  P  T P+  A  T+ AL+RT P AVP   FLSGGQSEE+A+ +LNA+N+L   KPW+L+FS+GRALQ S LKAW GK+EN++ AQ   + R K N +A+ G YK     G  A ESL V ++ Y
Sbjct:  226 GTLLKPNMVTVGTAAPASTRPEQVAMATLTALRRTVPPAVPGITFLSGGQSEEDASIHLNAINKLHLIKPWALTFSYGRALQASVLKAWGGKKENLKAAQDELMRRAKINGQASKGEYK-PTGTGAAAGESLFVANHAY 363          
BLAST of CX675471 vs. ExPASy Swiss-Prot
Match: ALDOC_RAT (Fructose-bisphosphate aldolase C OS=Rattus norvegicus GN=Aldoc PE=1 SV=3)

HSP 1 Score: 138.272 bits (347), Expect = 2.685e-32
Identity = 73/139 (52.52%), Postives = 92/139 (66.19%), Query Frame = -2
Query:  166 GTLLKPNMVTPGSEVP-KVTPDVNAEHTVRALQRTTPAAVPAAVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 579
            GTLLKPNMVTPG   P K +P+  A  TV AL+RT P AVP   FLSGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A  G Y+G    G  AA+SL+V ++ Y
Sbjct:  226 GTLLKPNMVTPGHACPIKYSPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCSLPRPWALTFSYGRALQASALSAWRGQRDNAGAATEEFIKRAEMNGLAAQGKYEGSGD-GGAAAQSLYVANHAY 363          
BLAST of CX675471 vs. ExPASy Swiss-Prot
Match: ALF_SCHMA (Fructose-bisphosphate aldolase OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 3.506e-32
Identity = 77/141 (54.61%), Postives = 93/141 (65.96%), Query Frame = -2
Query:  166 GTLLKPNMVTPGSEVPKV-TPDVNAEHTVRALQRTTPAAVPAAVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGD--AQLGEGAAESLHVKDYKY 579
            GTLLKPNMVT G    K  TP  NA  TVRALQRT P AVP   FLSGGQSE +AT+NLN +N++   KPW+L+FSFGRALQ S L  W GK+ENV  AQ   L   KAN  A +G ++G+    LG+   +SL V ++ Y
Sbjct:  226 GTLLKPNMVTAGQACKKAYTPQENALATVRALQRTVPPAVPGITFLSGGQSELDATKNLNEINKIPGPKPWALTFSFGRALQASVLATWKGKKENVHAAQEELLKLAKANGAAAVGKFEGNMGTTLGD---KSLFVANHAY 363          
The following BLAST results are available for this feature:
BLAST of CX675471 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALDOA_MOUSE7.065e-3353.96Fructose-bisphosphate aldolase A OS=Mus musculus G... [more]
ALDOA_HUMAN7.065e-3354.68Fructose-bisphosphate aldolase A OS=Homo sapiens G... [more]
ALDOB_CHICK9.227e-3356.12Fructose-bisphosphate aldolase B OS=Gallus gallus ... [more]
ALFC_ORYSJ1.574e-3253.96Fructose-bisphosphate aldolase, chloroplastic OS=O... [more]
ALFC1_ARATH1.574e-3254.68Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALDOB_BOVIN2.056e-3254.68Fructose-bisphosphate aldolase B OS=Bos taurus GN=... [more]
ALDOA_PONAB2.056e-3253.96Fructose-bisphosphate aldolase A OS=Pongo abelii G... [more]
ALF1_LAMJA2.685e-3253.96Fructose-bisphosphate aldolase, muscle type OS=Lam... [more]
ALDOC_RAT2.685e-3252.52Fructose-bisphosphate aldolase C OS=Rattus norvegi... [more]
ALF_SCHMA3.506e-3254.61Fructose-bisphosphate aldolase OS=Schistosoma mans... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_62E03_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62E03-J6-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675471 ID=CX675471; Name=CX675471; organism=Citrus sinensis; type=EST; length=580bp
TTTTTTTAAACCACTCAAACCGAAGTTCCCAAGCTTTTTATTGCTCCACC
TAAATATGAAAAAGCTCTAAAACTATGAATGAGAATGGGCCAACCTAATG
TTCATACCGCCTTTTACTCTCATAAAGTTCATAAAGCACAACACCCAAAG
CTTCAACTGTGCTTAGTATTTGTAGTCCTTGACATGGAGAGACTCTGCGG
CACCTTCACCAAGCTGGGCATCACCCTTGTAAGTACCGAGGGTAGCCTCA
GAGTTGGCCTTGCACCTGACAAGGAAAGCAGCCTGGGCCTTCTGCACATT
CTCTTCCTTTCCGGCCCATGCCTTGAGAGTGCTCTGCTGAAGTGCACGTC
CAAAGGAGAAGGAAAGTGACCATGGCTTCTTCGTCTTGAGCTGGTTCATG
GCATTAAGGTTGCGGGTAGCCTCCTCCTCACTCTGCCCACCAGACAAGAA
CACAGCAGCGGGAACTGCTGCAGGCGTAGTGCGTTGCAGGGCCCGGACAG
TGTGTTCAGCATTCACGTCCGGTGTAACTTTGGGAACTTCAGATCCAGGG
GTCACCATGTTGGGCTTCAAAAGGGTACCC
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