CX675428

Overview
NameCX675428
Unique NameCX675428
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length566
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675428 vs. ExPASy Swiss-Prot
Match: FKBP5_SAIBB (FK506-binding protein 5 OS=Saimiri boliviensis boliviensis GN=FKBP5 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 7.496e-16
Identity = 50/115 (43.48%), Postives = 70/115 (60.87%), Query Frame = 3
Query:   21 TEKEMGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGA-GGFPQWGIQPNSVLDFEIQVL 359
            ++K+ G+ K +   G+G + P+ G +V VH  G   NG   +KF S+ D  + PF F IGKG VIK WD GV  M+ GE+  L C P+YAYGA G  P+  I  N+ L FE+++L
Sbjct:   27 SKKDRGVLKIVKRVGHGEETPMIGDRVYVHYNGKLANG---KKFDSSHDRNE-PFVFSIGKGQVIKAWDIGVATMKKGEICHLLCKPEYAYGATGSLPK--IPSNATLFFEVELL 135          
BLAST of CX675428 vs. ExPASy Swiss-Prot
Match: FKBP5_CERAE (FK506-binding protein 5 OS=Cercopithecus aethiops GN=FKBP5 PE=2 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 7.496e-16
Identity = 51/115 (44.35%), Postives = 69/115 (60.00%), Query Frame = 3
Query:   21 TEKEMGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYG-AGGFPQWGIQPNSVLDFEIQVL 359
            ++K+ G+ K +   GNG + P+ G KV VH  G   NG   +KF S+ D  + PF F +GK  VIK WD GV  M+ GE+  L C P+YAYG AG  P+  I  N+ L FEI++L
Sbjct:   27 SKKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNG---KKFNSSHDRNE-PFVFSLGKSQVIKAWDIGVATMKKGEICHLLCKPEYAYGSAGSVPK--IPSNATLFFEIELL 135          
BLAST of CX675428 vs. ExPASy Swiss-Prot
Match: FKBP4_USTMA (FK506-binding protein 4 OS=Ustilago maydis GN=FPR4 PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 7.496e-16
Identity = 49/120 (40.83%), Postives = 68/120 (56.67%), Query Frame = 3
Query:    9 KNPKTEKEMGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQVE 368
            K   T+   G+  +  + G+GP   AGQKV +   G   NG +  +  S K     PF F++GKG VIKGWDEGV GM+VG   RL C P  AYG    P  GI  NS L F++++++++
Sbjct:  263 KMTTTKLPSGLVIEEKSAGSGPPCKAGQKVGMRYVGKLTNGKVFDQCTSGK-----PFYFKLGKGEVIKGWDEGVKGMRVGAERRLTCPPKLAYGNQKIP--GIPANSTLVFDVKLVEIK 375          
BLAST of CX675428 vs. ExPASy Swiss-Prot
Match: FKBP4_MOUSE (FK506-binding protein 4 OS=Mus musculus GN=Fkbp4 PE=1 SV=5)

HSP 1 Score: 83.1889 bits (204), Expect = 9.790e-16
Identity = 48/114 (42.11%), Postives = 69/114 (60.53%), Query Frame = 3
Query:   24 EKEMGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQ 362
            +++ G+ K I   G G + P+ G +V VH TG+  +G    KF S+ D  +  F+F +GKG VIK WD  V  M+VGEV  + C P+YAYGA G P   I PN+ L FE+++ +
Sbjct:   28 KQDEGVLKVIKREGTGTETPMIGDRVFVHYTGWLLDGT---KFDSSLDR-KDKFSFDLGKGEVIKAWDIAVATMKVGEVCHITCKPEYAYGAAGSPP-KIPPNATLVFEVELFE 136          
BLAST of CX675428 vs. ExPASy Swiss-Prot
Match: FKBP4_RABIT (FK506-binding protein 4 OS=Oryctolagus cuniculus GN=FKBP4 PE=1 SV=3)

HSP 1 Score: 82.8037 bits (203), Expect = 1.279e-15
Identity = 47/114 (41.23%), Postives = 70/114 (61.40%), Query Frame = 3
Query:   24 EKEMGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQ 362
            +++ G+ K I   G G + P+ G +V VH TG+  +G    KF S+ D  +  F+F +GKG VIK WD  V  M+VGE+ R+ C P+YAYG+ G P   I PN+ L FE+++ +
Sbjct:   28 KQDEGVLKVIKREGTGTETPMIGDRVFVHYTGWLLDGT---KFDSSLDR-KDKFSFDLGKGEVIKAWDIAVATMKVGELCRITCKPEYAYGSAGSPP-KIPPNATLVFEVELFE 136          
BLAST of CX675428 vs. ExPASy Swiss-Prot
Match: FKBP4_HUMAN (FK506-binding protein 4 OS=Homo sapiens GN=FKBP4 PE=1 SV=3)

HSP 1 Score: 81.6481 bits (200), Expect = 2.848e-15
Identity = 46/114 (40.35%), Postives = 69/114 (60.53%), Query Frame = 3
Query:   24 EKEMGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQ 362
            +++ G+ K I   G G + P+ G +V VH TG+  +G    KF S+ D  +  F+F +GKG VIK WD  +  M+VGEV  + C P+YAYG+ G P   I PN+ L FE+++ +
Sbjct:   28 KQDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGT---KFDSSLDR-KDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPP-KIPPNATLVFEVELFE 136          
BLAST of CX675428 vs. ExPASy Swiss-Prot
Match: FKBP4_BOVIN (FK506-binding protein 4 OS=Bos taurus GN=FKBP4 PE=1 SV=4)

HSP 1 Score: 80.8777 bits (198), Expect = 4.859e-15
Identity = 47/114 (41.23%), Postives = 68/114 (59.65%), Query Frame = 3
Query:   24 EKEMGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQ 362
            +++ G+ K I   G G + P+ G +V VH TG+  +G    KF S+ D   + F+F +GKG VIK WD  V  M+VGEV  + C P+YAYG  G P   I PN+ L FE+++ +
Sbjct:   28 KQDEGVLKVIKREGTGTETPMIGDRVFVHYTGWLLDGT---KFDSSLDRKDR-FSFDLGKGEVIKAWDIAVATMKVGEVCHITCKPEYAYGLAGSPP-KIPPNATLVFEVELFE 136          
BLAST of CX675428 vs. ExPASy Swiss-Prot
Match: FKBP_KLULA (FK506-binding protein 1 OS=Kluyveromyces lactis GN=FPR1 PE=3 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 8.288e-15
Identity = 51/107 (47.66%), Postives = 64/107 (59.81%), Query Frame = 3
Query:   54 LTPG---NGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQV 365
            L+PG   N PKP  G  VT+H TG  +NG   QKF S+ D G  PF   IG G VIKGWD  +  + VGE ARL     YAYG  GFP   I PN+ L F++++L++
Sbjct:   14 LSPGDSTNFPKP--GDLVTIHYTGTLENG---QKFDSSVDRGS-PFQCNIGVGQVIKGWDAAIPKLSVGEKARLTIPGPYAYGPRGFPGL-IPPNATLVFDVELLKI 113          
BLAST of CX675428 vs. ExPASy Swiss-Prot
Match: FKBP5_MOUSE (FK506-binding protein 5 OS=Mus musculus GN=Fkbp5 PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 8.288e-15
Identity = 48/114 (42.11%), Postives = 68/114 (59.65%), Query Frame = 3
Query:   21 TEKEMGIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVL 359
            T+K+ G+ K +   G   + P+ G KV VH  G   +G   +KF S+ D  ++PF F +G+G VIK WD GV  M+ GE+  L C P+YAYG+ G  Q  I  N+ L FEI++L
Sbjct:   27 TKKDRGVLKIVKRVGTSDEAPMFGDKVYVHYKGMLSDG---KKFDSSHDR-KKPFAFSLGQGQVIKAWDIGVSTMKKGEICHLLCKPEYAYGSAGHLQ-KIPSNATLFFEIELL 135          
BLAST of CX675428 vs. ExPASy Swiss-Prot
Match: FKBP_ASHGO (FK506-binding protein 1 OS=Ashbya gossypii GN=FPR1 PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.082e-14
Identity = 50/105 (47.62%), Postives = 62/105 (59.05%), Query Frame = 3
Query:   54 LTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQV 365
            L+PG+G   P  G  VT+H TG  +N    QKF S+ D G  PF   IG G VIKGWD  +  + VGE ARL     YAYG  GFP   I PN+ L FE+++L+V
Sbjct:   14 LSPGDGKTFPKTGDLVTIHYTGTLEN---EQKFDSSVDRGS-PFQCNIGVGQVIKGWDVAIPKLSVGEKARLTIPGAYAYGPRGFPGL-IPPNATLIFEVELLKV 113          
The following BLAST results are available for this feature:
BLAST of CX675428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
FKBP5_SAIBB7.496e-1643.48FK506-binding protein 5 OS=Saimiri boliviensis bol... [more]
FKBP5_CERAE7.496e-1644.35FK506-binding protein 5 OS=Cercopithecus aethiops ... [more]
FKBP4_USTMA7.496e-1640.83FK506-binding protein 4 OS=Ustilago maydis GN=FPR4... [more]
FKBP4_MOUSE9.790e-1642.11FK506-binding protein 4 OS=Mus musculus GN=Fkbp4 P... [more]
FKBP4_RABIT1.279e-1541.23FK506-binding protein 4 OS=Oryctolagus cuniculus G... [more]
FKBP4_HUMAN2.848e-1540.35FK506-binding protein 4 OS=Homo sapiens GN=FKBP4 P... [more]
FKBP4_BOVIN4.859e-1541.23FK506-binding protein 4 OS=Bos taurus GN=FKBP4 PE=... [more]
FKBP_KLULA8.288e-1547.66FK506-binding protein 1 OS=Kluyveromyces lactis GN... [more]
FKBP5_MOUSE8.288e-1542.11FK506-binding protein 5 OS=Mus musculus GN=Fkbp5 P... [more]
FKBP_ASHGO1.082e-1447.62FK506-binding protein 1 OS=Ashbya gossypii GN=FPR1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_62B09_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62B09-D18-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675428 ID=CX675428; Name=CX675428; organism=Citrus sinensis; type=EST; length=566bp
AGAAAGTCAAAAACCCTAAGACAGAGAAGGAGATGGGAATAGAGAAGCAA
ATTTTGACCCCAGGAAACGGTCCTAAGCCGGTTGCTGGTCAGAAGGTTAC
CGTCCACTGCACTGGCTACGGGAAAAATGGCGATCTGTCTCAGAAGTTCT
GGAGCACAAAGGACCCTGGGCAGCAGCCTTTTACATTCCAGATTGGCAAA
GGCTCTGTTATAAAAGGATGGGATGAAGGTGTGATGGGAATGCAGGTGGG
AGAAGTTGCTCGTCTGCGGTGCTCCCCAGATTACGCCTATGGTGCTGGTG
GATTTCCACAATGGGGGATTCAACCTAACTCAGTCCTGGATTTTGAGATA
CAAGTCCTGCAGGTAGAATAAGCACCTCATAAAGGCAGAAAACCATCTAG
AAAATTTTATGGTTTTAAATAAATTGTCTTACCATGGACATGTATGTATG
TTATCCTGAACTCCTGATAAATATCAGATGGCTATGATGGAACGATCTTT
TTTTTCGACGTTTTAATAACACTACATGTGCAACTTTTTAGCAACAAAGA
CTTCTTGTTAAAAAAA
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