CX675428

Overview
NameCX675428
Unique NameCX675428
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length566
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675428 vs. ExPASy Swiss-Prot
Match: FKB1B_ASPFU (FK506-binding protein 1B OS=Aspergillus fumigatus GN=fpr1B PE=3 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.082e-14
Identity = 51/118 (43.22%), Postives = 68/118 (57.63%), Query Frame = 3
Query:   33 MGIEKQILTPGNGPK-PVAGQKVTVHCTGY-----GKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQVE 368
            MG+EKQ L  GNG   P  G  V ++ TGY       +    ++F S+K  G  P    IG G VI+GWDEGV  M +GE A L  S +YAYG  GFP   I PN+ L FE+++L+++
Sbjct:    1 MGLEKQTLRMGNGKDHPQPGDPVELNYTGYLYDESNPDHHKGKEFDSSKRRG--PLKATIGAGDVIRGWDEGVRQMSLGEKAILTMSGEYAYGEKGFPGL-IPPNASLVFEVELLKIK 115          
BLAST of CX675428 vs. ExPASy Swiss-Prot
Match: FKBP4_RAT (FK506-binding protein 4 OS=Rattus norvegicus GN=Fkbp4 PE=1 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 1.846e-14
Identity = 46/114 (40.35%), Postives = 68/114 (59.65%), Query Frame = 3
Query:   24 EKEMGIEKQILTPGNGPKP-VAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQ 362
            +++ G+ K I   G G +  + G +V VH TG+  +G    KF S+ D  +  F+F +GKG VIK WD  V  M+VGEV  + C P+YAYG+ G P   I PN+ L FE+++ +
Sbjct:   28 KQDEGVLKVIKREGTGTETAMIGDRVFVHYTGWLLDGT---KFDSSLDR-KDKFSFDLGKGEVIKAWDIAVATMKVGEVCHITCKPEYAYGSAGSPP-KIPPNATLVFEVELFE 136          
BLAST of CX675428 vs. ExPASy Swiss-Prot
Match: FKB1B_NEUCR (Peptidyl-prolyl cis-trans isomerase fkr-3 OS=Neurospora crassa GN=fkr-3 PE=3 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 5.372e-14
Identity = 48/107 (44.86%), Postives = 60/107 (56.07%), Query Frame = 3
Query:   33 MGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDP-GQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEI 350
            MG+ K     G GP+P AGQ V +  TG+ K  D SQ      D  G+  F  QIG G +I+GWDE V+ M+VGE A L  S DY YG  GF    I PN+ L F++
Sbjct:    1 MGVNKITHVAGTGPQPEAGQTVVIEYTGWLK--DSSQADGKGADSIGRGDFVTQIGVGRLIRGWDEAVLKMKVGEKATLDISSDYGYGERGF-HGHIPPNADLIFDV 104          
BLAST of CX675428 vs. ExPASy Swiss-Prot
Match: FKBP3_CANGA (FK506-binding protein 3 OS=Candida glabrata GN=FPR3 PE=3 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 9.163e-14
Identity = 47/121 (38.84%), Postives = 64/121 (52.89%), Query Frame = 3
Query:    9 KNPKTEK-EMGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQVE 368
            K PK    E G+  +  T G+GP    G +V +   G  KNG +  K  S K     PF F++G+G VIKGWD GV GM VG   R+     YAYG    P  GI  NS L F+++++ ++
Sbjct:  324 KTPKRRTLEGGVVIEDRTVGDGPAAKKGDRVGMRYIGKLKNGKVFDKNTSGK-----PFVFKLGRGEVIKGWDVGVAGMSVGSERRIIIPAPYAYGKQALP--GIPANSELTFDVKLVSIK 437          
BLAST of CX675428 vs. ExPASy Swiss-Prot
Match: FKBP3_YARLI (FK506-binding protein 3 OS=Yarrowia lipolytica GN=FPR3 PE=3 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.041e-13
Identity = 47/122 (38.52%), Postives = 64/122 (52.46%), Query Frame = 3
Query:    3 KVKNPKTEKEMGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQVE 368
            K K    + E G++ +  T G GP    G KV V   G   NG    K + +   G+ PF F +GKG VI+GWD GV GM+V    R+   P  AYG    P  GI PNS L F+++V+ ++
Sbjct:  293 KPKLVTRQLEGGVKIEDRTVGEGPSAKVGSKVGVRYVGKLANG----KVFDSNSKGK-PFYFSVGKGEVIRGWDIGVQGMKVKGERRIIIPPGMAYGKQKLP--GIPPNSQLTFDVKVVNIK 407          
BLAST of CX675428 vs. ExPASy Swiss-Prot
Match: FKB59_DROME (FK506-binding protein 59 OS=Drosophila melanogaster GN=FKBP59 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 2.666e-13
Identity = 45/109 (41.28%), Postives = 65/109 (59.63%), Query Frame = 3
Query:   36 GIEKQILTPGNGPK-PVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVL 359
            G+ K+IL  G G + P +G  V++H TG   +G       S  +P    F F +GKG+VIK +D GV  M++GE   L C+P+YAYGA G P   I P++ L FE+++L
Sbjct:   14 GVLKEILKEGTGTETPHSGCTVSLHYTGRLVDGTEFDSSLSRNEP----FEFSLGKGNVIKAFDMGVATMKLGERCFLTCAPNYAYGAAGSPP-AIPPDATLIFELEML 117          
BLAST of CX675428 vs. ExPASy Swiss-Prot
Match: FKBP3_YEAST (FK506-binding nuclear protein OS=Saccharomyces cerevisiae GN=FPR3 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 5.939e-13
Identity = 45/113 (39.82%), Postives = 62/113 (54.87%), Query Frame = 3
Query:   30 EMGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQVE 368
            E GI  +  T G+GP+   G +V +   G  KNG +  K  S K     PF F++G+G VIKGWD GV GM VG   R+     YAYG    P  GI  NS L F+++++ ++
Sbjct:  305 EGGIVIEDRTIGDGPQAKRGARVGMRYIGKLKNGKVFDKNTSGK-----PFAFKLGRGEVIKGWDIGVAGMSVGGERRIIIPAPYAYGKQALP--GIPANSELTFDVKLVSMK 410          
BLAST of CX675428 vs. ExPASy Swiss-Prot
Match: FKB2B_RHIOR (FK506-binding protein 2B OS=Rhizopus oryzae GN=FKBP3 PE=3 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 5.939e-13
Identity = 44/122 (36.07%), Postives = 72/122 (59.02%), Query Frame = 3
Query:    6 VKNPKTEKEMGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQP-NSVLDFEIQVLQVE 368
            +K P T+ ++G++K+I       K  +G ++++H TG     D  +KF S+ D  + PF F +G G VI+GWD+G++GM VGE  RL   P   YG  G    G+ P  + L FE+++L+++
Sbjct:   20 LKEPPTQLQVGVKKRIPASECTRKSHSGDELSMHYTG--TLFDTGEKFDSSLDRNE-PFVFTLGAGQVIQGWDQGLLGMCVGEKRRLVIPPHLGYGERG--AGGVIPGGATLVFEVELLEIK 136          
BLAST of CX675428 vs. ExPASy Swiss-Prot
Match: FKB70_WHEAT (70 kDa peptidyl-prolyl isomerase OS=Triticum aestivum GN=FKBP70 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.013e-12
Identity = 43/111 (38.74%), Postives = 65/111 (58.56%), Query Frame = 3
Query:   30 EMGIEKQILTPGNG-PKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVL 359
            + G++K++L  G G   P  G +V VH TG   +G   +KF S++D     F F++G+G VIKGWD+G+  M+ GE A     P+ AYG  G P   I  N+ L F++++L
Sbjct:   40 KQGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLDG---KKFDSSRDR-DDTFKFKLGQGQVIKGWDQGIKTMKKGENALFTIPPELAYGESGSPP-TIPANATLQFDVELL 145          
BLAST of CX675428 vs. ExPASy Swiss-Prot
Match: FKBP4_EMENI (FK506-binding protein 4 OS=Emericella nidulans GN=fpr4 PE=3 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.728e-12
Identity = 42/102 (41.18%), Postives = 58/102 (56.86%), Query Frame = 3
Query:   63 GNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQVE 368
            G GP   +G  V +   G  +NG    K + +   G+ PFTF++GKG VIKGWD GV GM VG   R+      AYG  G P  GI  NS L F++++L+++
Sbjct:  384 GKGPAAASGNTVAMRYIGKLENG----KVFDSNKKGK-PFTFKLGKGEVIKGWDIGVAGMAVGGERRITIPSHLAYGKKGVP--GIPGNSKLIFDVKLLEIK 478          
The following BLAST results are available for this feature:
BLAST of CX675428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
FKB1B_ASPFU1.082e-1443.22FK506-binding protein 1B OS=Aspergillus fumigatus ... [more]
FKBP4_RAT1.846e-1440.35FK506-binding protein 4 OS=Rattus norvegicus GN=Fk... [more]
FKB1B_NEUCR5.372e-1444.86Peptidyl-prolyl cis-trans isomerase fkr-3 OS=Neuro... [more]
FKBP3_CANGA9.163e-1438.84FK506-binding protein 3 OS=Candida glabrata GN=FPR... [more]
FKBP3_YARLI2.041e-1338.52FK506-binding protein 3 OS=Yarrowia lipolytica GN=... [more]
FKB59_DROME2.666e-1341.28FK506-binding protein 59 OS=Drosophila melanogaste... [more]
FKBP3_YEAST5.939e-1339.82FK506-binding nuclear protein OS=Saccharomyces cer... [more]
FKB2B_RHIOR5.939e-1336.07FK506-binding protein 2B OS=Rhizopus oryzae GN=FKB... [more]
FKB70_WHEAT1.013e-1238.7470 kDa peptidyl-prolyl isomerase OS=Triticum aesti... [more]
FKBP4_EMENI1.728e-1241.18FK506-binding protein 4 OS=Emericella nidulans GN=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_62B09_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62B09-D18-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675428 ID=CX675428; Name=CX675428; organism=Citrus sinensis; type=EST; length=566bp
AGAAAGTCAAAAACCCTAAGACAGAGAAGGAGATGGGAATAGAGAAGCAA
ATTTTGACCCCAGGAAACGGTCCTAAGCCGGTTGCTGGTCAGAAGGTTAC
CGTCCACTGCACTGGCTACGGGAAAAATGGCGATCTGTCTCAGAAGTTCT
GGAGCACAAAGGACCCTGGGCAGCAGCCTTTTACATTCCAGATTGGCAAA
GGCTCTGTTATAAAAGGATGGGATGAAGGTGTGATGGGAATGCAGGTGGG
AGAAGTTGCTCGTCTGCGGTGCTCCCCAGATTACGCCTATGGTGCTGGTG
GATTTCCACAATGGGGGATTCAACCTAACTCAGTCCTGGATTTTGAGATA
CAAGTCCTGCAGGTAGAATAAGCACCTCATAAAGGCAGAAAACCATCTAG
AAAATTTTATGGTTTTAAATAAATTGTCTTACCATGGACATGTATGTATG
TTATCCTGAACTCCTGATAAATATCAGATGGCTATGATGGAACGATCTTT
TTTTTCGACGTTTTAATAACACTACATGTGCAACTTTTTAGCAACAAAGA
CTTCTTGTTAAAAAAA
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