CX675428

Overview
NameCX675428
Unique NameCX675428
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length566
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675428 vs. ExPASy Swiss-Prot
Match: FKBP4_DICDI (FK506-binding protein 4 OS=Dictyostelium discoideum GN=fkbp4 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 1.728e-12
Identity = 43/108 (39.81%), Postives = 58/108 (53.70%), Query Frame = 3
Query:   36 GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVL 359
            G++ + L  G+GP P +G+KV V   G   NG        T      PFTF+IG   VI+GWD GV  M+VG   RL    D AYG  G P   I PN+ L F+++++
Sbjct:  260 GLQYEDLVVGSGPSPKSGKKVGVKYIGKLTNGKTFDSSLRT------PFTFRIGIREVIRGWDIGVASMKVGGKRRLTIPADLAYGRSGAPP-SIPPNATLIFDVELV 360          
BLAST of CX675428 vs. ExPASy Swiss-Prot
Match: FKBP3_RABIT (FK506-binding protein 3 OS=Oryctolagus cuniculus GN=FKBP3 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 1.728e-12
Identity = 49/141 (34.75%), Postives = 72/141 (51.06%), Query Frame = 3
Query:    3 KVKNPKTEKEMGIE-KQILTPGNGPKPVA------GQKVT-------VHC--TGYGKNG---DLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQVE 368
            +VKN K  ++   E K   TP  GP          G K         VHC  TG  ++G   D + +  S K    +P +F++G G VI+GWDE ++ M  GE ARL   P++AYG  G P   I PN+ L FE++++ ++
Sbjct:   84 QVKNVKLNEDKPKETKSEETPDEGPPKYTKSVLKKGDKTNFPKKGDVVHCWYTGTLQDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLTMSKGEKARLEIEPEWAYGKKGQPDAKIPPNAKLIFEVELVDID 224          
BLAST of CX675428 vs. ExPASy Swiss-Prot
Match: FKBP_NEIMB (FK506-binding protein OS=Neisseria meningitidis serogroup B GN=fbp PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.257e-12
Identity = 45/110 (40.91%), Postives = 65/110 (59.09%), Query Frame = 3
Query:   36 GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQV 365
            G+  + L  G G + V G+++TVH TG+ +NG    KF S+ D  +QP T  +G G VIKGWDEG  GM+ G   +L    +  YGA G     I P++ L FE+++L+V
Sbjct:    3 GLIIEDLQEGFGKEAVKGKEITVHYTGWLENGT---KFDSSLDR-RQPLTITLGVGQVIKGWDEGFGGMKEGGKRKLTIPSEMGYGAHG-AGGVIPPHATLIFEVELLKV 107          
BLAST of CX675428 vs. ExPASy Swiss-Prot
Match: FKBP_DEBHA (FK506-binding protein 1 OS=Debaryomyces hansenii GN=FPR1 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 2.257e-12
Identity = 48/109 (44.04%), Postives = 64/109 (58.72%), Query Frame = 3
Query:   48 QILTPGNG---PKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQV 365
            +IL  G+G   PKP  G  VT+H TG  +NG   +KF S++D G+ PF   IG G VI GWD G+  + VG  A+L      AYG  GFP   I PN+ L F++++L V
Sbjct:   10 EILQEGDGKTFPKP--GDLVTIHYTGTLENG---KKFDSSRDRGK-PFQCTIGVGQVIVGWDTGIPKLSVGSRAKLSIPGHEAYGDRGFPGL-IPPNATLLFDVELLNV 111          
BLAST of CX675428 vs. ExPASy Swiss-Prot
Match: FKBP_NEIMA (FK506-binding protein OS=Neisseria meningitidis serogroup A GN=fbp PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.948e-12
Identity = 44/104 (42.31%), Postives = 62/104 (59.62%), Query Frame = 3
Query:   54 LTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQV 365
            L  G G + V G+++TVH TG+ +NG    KF S+ D  +QP T  +G G VIKGWDEG  GM+ G   +L    +  YGA G     I P++ L FE+++L+V
Sbjct:    9 LQEGFGKEAVKGKEITVHYTGWLENGT---KFDSSLDR-RQPLTITLGVGQVIKGWDEGFGGMKEGGKRKLTIPSEMGYGARG-AGGVIPPHATLIFEVELLKV 107          
BLAST of CX675428 vs. ExPASy Swiss-Prot
Match: FKBP4_YEAST (FK506-binding protein 4 OS=Saccharomyces cerevisiae GN=FPR4 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.948e-12
Identity = 47/119 (39.50%), Postives = 65/119 (54.62%), Query Frame = 3
Query:   15 PKTEK-EMGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQVE 368
            PKT+  E GI  +    G GP    G +V +   G  KNG +  K  +TK    +PF F++G+G VIKGWD GV GM VG   R+     YAYG    P  GI  NS L F+++++ ++
Sbjct:  281 PKTKLLEGGIIIEDRVTGKGPHAKKGTRVGMRYVGKLKNGKVFDK--NTKG---KPFVFKLGQGEVIKGWDIGVAGMAVGGERRIVIPAPYAYGKQALP--GIPANSELTFDVKLVSMK 392          
BLAST of CX675428 vs. ExPASy Swiss-Prot
Match: FKBP4_GIBZE (FK506-binding protein 4 OS=Gibberella zeae GN=FPR4 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.948e-12
Identity = 44/111 (39.64%), Postives = 61/111 (54.95%), Query Frame = 3
Query:   36 GIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQVE 368
            G+     T GNG    +G  V V   G  +NG    K +     G+ PF+F+ GKG VIKGWD GV+GM +G   RL      AYG+ G P  GI  NS L F++++L+++
Sbjct:  392 GVTVDDRTVGNGRTVKSGDTVGVRYIGKLQNG----KQFDANKKGK-PFSFKAGKGQVIKGWDIGVIGMAIGGERRLTIPAHLAYGSRGLP--GIPANSTLIFDVKLLEIK 495          
BLAST of CX675428 vs. ExPASy Swiss-Prot
Match: FKBP4_ASPOR (FK506-binding protein 4 OS=Aspergillus oryzae GN=fpr4 PE=3 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 2.948e-12
Identity = 42/102 (41.18%), Postives = 57/102 (55.88%), Query Frame = 3
Query:   63 GNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQVE 368
            G GP   AG  V +   G  ++G    K +     G+ PFTF++GKG VIKGWD GV GM VG   R+   P  AYG    P  GI  NS L F++++L+++
Sbjct:  376 GKGPAAKAGNTVAMRYIGKLEDG----KVFDANKKGK-PFTFKLGKGEVIKGWDIGVAGMAVGGERRISIPPHLAYGKKALP--GIPGNSKLIFDVKLLEIK 470          
BLAST of CX675428 vs. ExPASy Swiss-Prot
Match: FKBP4_ASPFU (FK506-binding protein 4 OS=Aspergillus fumigatus GN=fpr4 PE=3 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 2.948e-12
Identity = 41/102 (40.20%), Postives = 57/102 (55.88%), Query Frame = 3
Query:   63 GNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQVE 368
            G GP   AG  V +   G  ++G    K +     G+ PFTF++GKG VIKGWD G+ GM VG   R+   P  AYG    P  GI  NS L F++++L+++
Sbjct:  395 GKGPAAKAGNTVAMRYIGKLEDG----KVFDANKKGK-PFTFKLGKGEVIKGWDIGIAGMAVGGERRITIPPHLAYGKKALP--GIPANSKLIFDVKLLEIK 489          
BLAST of CX675428 vs. ExPASy Swiss-Prot
Match: FKBP3_KLULA (FK506-binding protein 3 OS=Kluyveromyces lactis GN=FPR3 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 3.850e-12
Identity = 48/123 (39.02%), Postives = 63/123 (51.22%), Query Frame = 3
Query:    3 KVKNPKTEK-EMGIEKQILTPGNGPKPVAGQKVTVHCTGYGKNGDLSQKFWSTKDPGQQPFTFQIGKGSVIKGWDEGVMGMQVGEVARLRCSPDYAYGAGGFPQWGIQPNSVLDFEIQVLQVE 368
            K + PKT+  E GI  +    G G     G KV +   G  KNG +  K  S K     PF F +G+G VIKGWD GV GM VG   R+     YAYG    P  GI  NS L F+++++ ++
Sbjct:  303 KKEKPKTKVLEGGIIIEDRVTGKGKACKKGSKVGMRYIGKLKNGKVFDKNTSGK-----PFVFNLGRGEVIKGWDIGVAGMAVGGERRIVIPAPYAYGKQALP--GIPANSELTFDVKLVSLK 418          
The following BLAST results are available for this feature:
BLAST of CX675428 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 72
Match NameE-valueIdentityDescription
FKBP4_DICDI1.728e-1239.81FK506-binding protein 4 OS=Dictyostelium discoideu... [more]
FKBP3_RABIT1.728e-1234.75FK506-binding protein 3 OS=Oryctolagus cuniculus G... [more]
FKBP_NEIMB2.257e-1240.91FK506-binding protein OS=Neisseria meningitidis se... [more]
FKBP_DEBHA2.257e-1244.04FK506-binding protein 1 OS=Debaryomyces hansenii G... [more]
FKBP_NEIMA2.948e-1242.31FK506-binding protein OS=Neisseria meningitidis se... [more]
FKBP4_YEAST2.948e-1239.50FK506-binding protein 4 OS=Saccharomyces cerevisia... [more]
FKBP4_GIBZE2.948e-1239.64FK506-binding protein 4 OS=Gibberella zeae GN=FPR4... [more]
FKBP4_ASPOR2.948e-1241.18FK506-binding protein 4 OS=Aspergillus oryzae GN=f... [more]
FKBP4_ASPFU2.948e-1240.20FK506-binding protein 4 OS=Aspergillus fumigatus G... [more]
FKBP3_KLULA3.850e-1239.02FK506-binding protein 3 OS=Kluyveromyces lactis GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_62B09_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62B09-D18-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675428 ID=CX675428; Name=CX675428; organism=Citrus sinensis; type=EST; length=566bp
AGAAAGTCAAAAACCCTAAGACAGAGAAGGAGATGGGAATAGAGAAGCAA
ATTTTGACCCCAGGAAACGGTCCTAAGCCGGTTGCTGGTCAGAAGGTTAC
CGTCCACTGCACTGGCTACGGGAAAAATGGCGATCTGTCTCAGAAGTTCT
GGAGCACAAAGGACCCTGGGCAGCAGCCTTTTACATTCCAGATTGGCAAA
GGCTCTGTTATAAAAGGATGGGATGAAGGTGTGATGGGAATGCAGGTGGG
AGAAGTTGCTCGTCTGCGGTGCTCCCCAGATTACGCCTATGGTGCTGGTG
GATTTCCACAATGGGGGATTCAACCTAACTCAGTCCTGGATTTTGAGATA
CAAGTCCTGCAGGTAGAATAAGCACCTCATAAAGGCAGAAAACCATCTAG
AAAATTTTATGGTTTTAAATAAATTGTCTTACCATGGACATGTATGTATG
TTATCCTGAACTCCTGATAAATATCAGATGGCTATGATGGAACGATCTTT
TTTTTCGACGTTTTAATAACACTACATGTGCAACTTTTTAGCAACAAAGA
CTTCTTGTTAAAAAAA
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