CK938091

Overview
NameCK938091
Unique NameCK938091
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length872
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938091 vs. ExPASy Swiss-Prot
Match: DNAJ_THICR (Chaperone protein dnaJ OS=Thiomicrospira crunogena (strain XCL-2) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.437e-11
Identity = 54/159 (33.96%), Postives = 75/159 (47.17%), Query Frame = 3
Query:   48 DYYKILGVDRNASCDDQKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMP--QGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVG--GPKKAPPIENRLPCTLEELYKGTTKKIKIYRK 512
            DYY+IL V   AS  + KKAY K+A +++PD+ PD+ +EAE K     EAYEVLSD QKR  +D +G     GS          + DF                  + FG+      F   F  G  GP+    ++  L  +LE+   GTT  ++I  K
Sbjct:    5 DYYEILEVSATASEGEIKKAYRKLAMRYHPDRNPDD-EEAEDKFKEASEAYEVLSDAQKRQAYDQFGHAGVDGSAGQGGFGGGGFADF-----------------GDIFGD-----IFGGGFGGGHRGPQPGSDLQYELEVSLEDAVAGTTVDVRIPTK 140          
BLAST of CK938091 vs. ExPASy Swiss-Prot
Match: DNAJ_PEDPA (Chaperone protein dnaJ OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.437e-11
Identity = 38/69 (55.07%), Postives = 47/69 (68.12%), Query Frame = 3
Query:   48 DYYKILGVDRNASCDDQKKAYEKMAAKWNPD--KYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG 248
            DYY ILGV ++AS D+ KKAY K++ K++PD  K PD    AE K   V EAYEVL D QKRA +D +G
Sbjct:    6 DYYDILGVSKDASDDEIKKAYRKLSKKYHPDINKAPD----AEQKFKDVNEAYEVLGDSQKRAQYDQFG 70          
BLAST of CK938091 vs. ExPASy Swiss-Prot
Match: DNAJ_METMA (Chaperone protein dnaJ OS=Methanosarcina mazei GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.437e-11
Identity = 53/158 (33.54%), Postives = 77/158 (48.73%), Query Frame = 3
Query:   48 DYYKILGVDRNASCDDQKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQ-GSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSF---NRVFVVGGPKKAPPIENRLPCTLEELYKGTTKKIKIYR 509
            DYY+ILG+ +++S +D KK Y K+A +++PD+  + +  AE K   + EAY VLSD +KRA +D +G     +  SA+DIF    DF                     G  D+F  F    R     GP++   ++  L  T EE   G  K I I R
Sbjct:    6 DYYEILGLSKDSSVEDIKKTYRKLALQYHPDR--NKEPGAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQYSAEDIF-RGADFG--------------------GFGDIFEMFFGGGRRGGPMGPRRGSDLQYDLYVTFEEAAFGVRKDIDIPR 140          
BLAST of CK938091 vs. ExPASy Swiss-Prot
Match: DNAJ_LEPCP (Chaperone protein dnaJ OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 2.437e-11
Identity = 35/68 (51.47%), Postives = 46/68 (67.65%), Query Frame = 3
Query:   48 DYYKILGVDRNASCDDQKKAYEKMAAKWNPDK-YPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG 248
            DYY++LGV + AS D+ KKAY K+A K +PD+   D  K +E K     EAYE+LSD QKRA +D +G
Sbjct:    5 DYYEVLGVGKTASEDEIKKAYRKLAMKHHPDRNQGDGAKASEEKFKEAKEAYEMLSDAQKRAAYDQFG 72          
BLAST of CK938091 vs. ExPASy Swiss-Prot
Match: DNAJ_THIDA (Chaperone protein dnaJ OS=Thiobacillus denitrificans (strain ATCC 25259) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.182e-11
Identity = 35/75 (46.67%), Postives = 49/75 (65.33%), Query Frame = 3
Query:   48 DYYKILGVDRNASCDDQKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYGMPQGSPRS 272
            DYY++LGV +NAS ++ KKAY K+A K +PD+ P +   AE K     +AYE+LSD  KRA +D +G     P+S
Sbjct:    5 DYYEVLGVAKNASDEEIKKAYRKLAMKHHPDRNPGD-HAAEDKFKEAKQAYEILSDSDKRAAYDQFGHAGVDPQS 78          
BLAST of CK938091 vs. ExPASy Swiss-Prot
Match: DNAJ_SYNE7 (Chaperone protein dnaJ OS=Synechococcus elongatus (strain PCC 7942) GN=dnaJ PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 3.182e-11
Identity = 65/253 (25.69%), Postives = 118/253 (46.64%), Query Frame = 3
Query:   48 DYYKILGVDRNASCDDQKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRA---MFDTYGMPQGSPR-SADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSFNRVFVVGGPKKAPPIENRLPCTLEELYKGTTKKIKIYRKIVDINGNT-IKVEE--ILTINVKPGWKKGTRITFEEKGNVQQNVKPADVVFIVDEKPHSVFTRDGNDLIVTRTITLGEALKGYTVRLTTLDGRI 785
            DYY +LG+ ++A     K A+ K+A + +PD  P ++ +AE +  ++ EAYE+LSDP +RA    F  Y   QG+    +DD + ++ DF I               +E  G   V  S         P+++     R   T   L +   + +++  K     G+  +++E+  +L +++  G + G  +    +G     +K  D++  V +   S F   G+D+I T  ++   A+ G  V + TLDG +
Sbjct:    6 DYYALLGIPQSADQAAIKAAFRKLARQCHPDLNPGDR-QAEERFKQISEAYEILSDPDRRAEYQRFSRYWQQQGAASVGSDDDYGDFPDFDI-------------FVDELLGRRTVERS---------PRRS---ARRSAATSSALSRDLERSLEVDPKTALQGGSAQLQLEDGRLLEVDIPAGIQAGEYLRLRGQG-----IKGGDLLLRV-QLQASNFQVQGSDVIYTLNVSPAMAVLGGQVTVPTLDGPV 226          
BLAST of CK938091 vs. ExPASy Swiss-Prot
Match: DNAJ_PARUW (Chaperone protein dnaJ OS=Protochlamydia amoebophila (strain UWE25) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.182e-11
Identity = 34/68 (50.00%), Postives = 48/68 (70.59%), Query Frame = 3
Query:   45 ADYYKILGVDRNASCDDQKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG 248
            ADYY+IL V R A+ ++ KKAY K A +++PDK P +  +AE +   + EAYEVLSD +KR ++D YG
Sbjct:    2 ADYYEILEVARGATPEEIKKAYRKKAVQYHPDKNPGD-ADAEKRFKEISEAYEVLSDEKKRQVYDRYG 68          
BLAST of CK938091 vs. ExPASy Swiss-Prot
Match: DNAJ_NATPD (Chaperone protein dnaJ OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.182e-11
Identity = 50/164 (30.49%), Postives = 74/164 (45.12%), Query Frame = 3
Query:   39 MGADYYKILGVDRNASCDDQKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG---MPQGSPRSADDIFSEYFDFTIPHXXXXXXXXXXXXXNEAFGEDDVFHSF----NRVFVVGGPKKAPPIENRLPCTLEELYKGTTKKIKIYR 509
            M  D+Y +LGV R+A  D+ K+AY K A++++PD   D    AE K  +V +A EVL D +KR M+D  G     +   R A D                             G +D+F  F     R     GP++   ++ RL   LE+ Y G TK++ + R
Sbjct:    1 MSEDFYSVLGVSRDADEDEIKQAYRKKASEYHPDVSDD--PNAEEKFKQVKKAKEVLLDDEKRRMYDQMGHERFQEAEKRGATD------------TDRGRGGMGGMGGGGMGGMNDIFEQFFGGGGRSQSRSGPRQGSDLKTRLKVDLEDAYHGVTKQLTVTR 150          
BLAST of CK938091 vs. ExPASy Swiss-Prot
Match: DNAJ_MYCPN (Chaperone protein dnaJ OS=Mycoplasma pneumoniae GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.182e-11
Identity = 32/71 (45.07%), Postives = 49/71 (69.01%), Query Frame = 3
Query:   48 DYYKILGVDRNASCDDQKKAYEKMAAKWNPDKYPDN----KKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG 248
            DYY++LGV R+A+  D K+A+ K+A +++PD++       +K+ E K   V EAYEVLSD +KR M+D +G
Sbjct:    7 DYYEVLGVSRSATAQDIKRAFRKLAMQYHPDRHKGEGETVQKQNEEKFKEVNEAYEVLSDTEKRGMYDRFG 77          
BLAST of CK938091 vs. ExPASy Swiss-Prot
Match: DNAJ_LACGA (Chaperone protein dnaJ OS=Lactobacillus gasseri (strain ATCC 33323 / DSM 20243) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 3.182e-11
Identity = 35/67 (52.24%), Postives = 46/67 (68.66%), Query Frame = 3
Query:   48 DYYKILGVDRNASCDDQKKAYEKMAAKWNPDKYPDNKKEAEAKLNRVCEAYEVLSDPQKRAMFDTYG 248
            DYY +LGVD+NAS  D  KAY K+A K++PD   +++  AE K   V EAYEVL D QK+A +D +G
Sbjct:    5 DYYDVLGVDKNASESDINKAYRKLAKKYHPDL--NHEPGAEEKYKEVNEAYEVLHDKQKKAQYDQFG 69          
The following BLAST results are available for this feature:
BLAST of CK938091 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_THICR2.437e-1133.96Chaperone protein dnaJ OS=Thiomicrospira crunogena... [more]
DNAJ_PEDPA2.437e-1155.07Chaperone protein dnaJ OS=Pediococcus pentosaceus ... [more]
DNAJ_METMA2.437e-1133.54Chaperone protein dnaJ OS=Methanosarcina mazei GN=... [more]
DNAJ_LEPCP2.437e-1151.47Chaperone protein dnaJ OS=Leptothrix cholodnii (st... [more]
DNAJ_THIDA3.182e-1146.67Chaperone protein dnaJ OS=Thiobacillus denitrifica... [more]
DNAJ_SYNE73.182e-1125.69Chaperone protein dnaJ OS=Synechococcus elongatus ... [more]
DNAJ_PARUW3.182e-1150.00Chaperone protein dnaJ OS=Protochlamydia amoebophi... [more]
DNAJ_NATPD3.182e-1130.49Chaperone protein dnaJ OS=Natronomonas pharaonis (... [more]
DNAJ_MYCPN3.182e-1145.07Chaperone protein dnaJ OS=Mycoplasma pneumoniae GN... [more]
DNAJ_LACGA3.182e-1152.24Chaperone protein dnaJ OS=Lactobacillus gasseri (s... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCGF1004478_B09 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0002_IVF_B09 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938091 ID=CK938091; Name=CK938091; organism=Citrus sinensis; type=EST; length=872bp
GGGGAGAAGCAGCAGTTAGTGAAAGTGAAGAAGAGAGGATGGGAGCTGAT
TATTACAAGATACTGGGAGTTGATCGGAATGCAAGTTGCGATGACCAGAA
GAAGGCTTACGAAAAGATGGCCGCGAAGTGGAATCCTGATAAATATCCTG
ATAACAAGAAAGAAGCTGAAGCTAAGTTGAACCGAGTTTGTGAAGCTTAT
GAGGTTCTAAGTGATCCTCAGAAAAGAGCAATGTTTGATACTTACGGTAT
GCCACAAGGCAGTCCCCGAAGTGCTGATGACATTTTTTCGGAATATTTTG
ATTTCACAATCCCCCATGGAGGTGGAGGGAGGAGAGGGTCAAGTTCCAGT
TTCTCAAATGAGGCATTTGGTGAGGATGATGTTTTTCATTCCTTTAATAG
AGTATTTGTAGTGGGTGGACCTAAGAAAGCACCTCCGATTGAGAATAGGC
TGCCTTGTACCCTTGAGGAACTCTACAAGGGGACTACTAAGAAGATAAAG
ATCTATAGGAAAATTGTTGACATCAATGGTAATACAATCAAGGTGGAAGA
AATTCTAACTATTAATGTGAAGCCTGGATGGAAGAAGGGTACAAGGATCA
CCTTCGAAGAGAAGGGAAATGTGCAGCAAAATGTTAAACCTGCAGACGTC
GTCTTCATCGTCGACGAGAAGCCTCACAGTGTGTTTACTCGAGATGGGAA
TGATTTGATCGTCACAAGGACGATAACTCTCGGTGAGGCCTTGAAAGGTT
ATACGGTTCGTCTCACCACCCTGGATGGAAGGATTTTGAACATCCCAATC
GACAATGTGATTCATCCCAACTATGAGATGACTGTCCCGAGAGAGGGGAT
GCCAATTCAGAACGAGCCATCA
back to top