CK938089

Overview
NameCK938089
Unique NameCK938089
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938089 vs. ExPASy Swiss-Prot
Match: CYP1_BRUMA (Peptidyl-prolyl cis-trans isomerase 1 OS=Brugia malayi GN=CYP-1 PE=1 SV=1)

HSP 1 Score: 166.392 bits (420), Expect = 1.968e-40
Identity = 89/173 (51.45%), Postives = 109/173 (63.01%), Query Frame = 1
Query:  139 KEITNKVYFDVEIAGKPAGRVVMGLFGKAVPKTAENFRALCTGEKGIGK-SGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVIADSGE 651
            K+   +V+ DV I G  AGR+VM L+    P+T  NF  LCTG  G GK SGKPLHYKGSTFHR+I +FM+Q            ESIYG  F DE F +KH  P ++SMAN GP+TNGSQFFITT     L+  HVVFGKV+SG +VV K+E  +      P + VVI + GE
Sbjct:    3 KKDRRRVFLDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLHYKGSTFHRVIKNFMIQGGDFTKGDGTGGESIYGGMFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTNSKNRPLADVVILNCGE 175          
BLAST of CK938089 vs. ExPASy Swiss-Prot
Match: PPID_CRYNE (Peptidyl-prolyl cis-trans isomerase D OS=Cryptococcus neoformans GN=CPR6 PE=3 SV=1)

HSP 1 Score: 166.007 bits (419), Expect = 2.570e-40
Identity = 87/163 (53.37%), Postives = 105/163 (64.42%), Query Frame = 1
Query:  160 YFDVEIAGKPAGRVVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVIADSG 648
            YFD+ IA +PAGR+   LF   VPKTA NF+ LC G+K   ++G  L Y GS+FHR I  FMLQ            ESIYGEKF DENF+LKH  P LLSMANAGP TNGSQFFITTV T  LDG+HVVFG+V+    +V ++E     +  P   V I+ +G
Sbjct:    7 YFDITIANEPAGRLTFELFDDVVPKTANNFKHLCIGDK-TNEAGVKLAYAGSSFHRCIKGFMLQGGDFTRGDGTGGESIYGEKFEDENFELKHDKPMLLSMANAGPGTNGSQFFITTVPTPHLDGKHVVFGRVIYNRSLVRRIENIPTTSDRPDQAVTISSAG 168          
BLAST of CK938089 vs. ExPASy Swiss-Prot
Match: PPIH_SCHPO (Peptidyl-prolyl cis-trans isomerase cyp3 OS=Schizosaccharomyces pombe GN=cyp3 PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.357e-40
Identity = 87/167 (52.10%), Postives = 109/167 (65.27%), Query Frame = 1
Query:  157 VYFDVEIAGKPAGRVVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEK-FPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEG-RQNGTPKSKVVIADSGE 651
            V+ D+ I G+  GR+ + LF   VPKTAENFR  CTGE  +G + KP+ YK STFHRII  FM+Q             +I+  + FPDENF LKH  PGLLSMANAG D+NG QFFITTV   +LDG+HVVFG+V+ G D+V ++E+     N  PKS V I + GE
Sbjct:    7 VFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGET-LGVNQKPIGYKNSTFHRIIQGFMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITTVPCDFLDGKHVVFGEVIEGYDIVKEIESTPVGANSRPKSNVAIVECGE 172          
BLAST of CK938089 vs. ExPASy Swiss-Prot
Match: PPIH_MOUSE (Peptidyl-prolyl cis-trans isomerase H OS=Mus musculus GN=Ppih PE=2 SV=1)

HSP 1 Score: 165.622 bits (418), Expect = 3.357e-40
Identity = 82/153 (53.59%), Postives = 99/153 (64.71%), Query Frame = 1
Query:  133 NLKEITNKVYFDVEIAGKPAGRVVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE 591
            N   +   V+FDV I G+  GR+ + LF   VPKTAENFR  CTGE    K G P+ YKGSTFHR+I  FM+Q             SIY   F DENFKL+H+ PGLLSMAN+GP TNG QFFIT     WLDG+HVVFGK++ G+ V+ K+E
Sbjct:    5 NSSPVNPVVFFDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGE--FRKDGVPIGYKGSTFHRVIKDFMIQGGDFVNGDGTGVASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIE 155          
BLAST of CK938089 vs. ExPASy Swiss-Prot
Match: PPIH_EMENI (Peptidyl-prolyl cis-trans isomerase H OS=Emericella nidulans GN=cyp3 PE=3 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 5.726e-40
Identity = 84/166 (50.60%), Postives = 105/166 (63.25%), Query Frame = 1
Query:  157 VYFDVEIAGKPAGRVVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGE-KFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVIADSGE 651
            V+FDV + G+P GR+ + LF    P+TAENFR  CTGE    + G+P  YKGS FHR+I  FM+Q             +IYG  KF DENF L+H  PGLLSMAN+GP+TNG QFFITT  T +L+G+HVVFG+V+ GMD+V  +E        P   VVI   GE
Sbjct:   18 VFFDVALGGEPLGRLKLELFADVTPRTAENFRQFCTGESK-NQQGRPQGYKGSKFHRVIKDFMIQGGDFVNGDGTGSCTIYGTPKFSDENFTLRHDRPGLLSMANSGPNTNGCQFFITTTATPFLNGKHVVFGQVIDGMDIVRMIENTRTTRDKPNQDVVIIQCGE 182          
BLAST of CK938089 vs. ExPASy Swiss-Prot
Match: CYPB_YEAST (Peptidyl-prolyl cis-trans isomerase B OS=Saccharomyces cerevisiae GN=CPR2 PE=1 SV=1)

HSP 1 Score: 164.851 bits (416), Expect = 5.726e-40
Identity = 99/201 (49.25%), Postives = 121/201 (60.20%), Query Frame = 1
Query:   73 LWAVVLLATFSSIQAKKSD------QNLKEITNKVYFDVEIAGKPAGRVVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTV-TTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQ-NGTPKSKVVIADSGE 651
            LW  +LL  F S+    SD      Q+ + IT KV+FD+E   +  GR+V+GL+GK  PKTA+NF  L T      K G    + GSTFHR+IP+FM+Q            +SIYG+ FPDENF LKH   G LSMAN G DTNGSQFFITT    SWLDG+HVVFG+V+ GMDVV  ++   R  N  P   V IA  GE
Sbjct:    6 LWCWLLL--FLSVNVIASDVGELIDQDDEVITQKVFFDIEHGEEKVGRIVIGLYGKVCPKTAKNFYKLSTTTNS--KKG----FIGSTFHRVIPNFMVQGGDFTDGTGVGGKSIYGDTFPDENFTLKHDRKGRLSMANRGKDTNGSQFFITTTEEASWLDGKHVVFGQVVDGMDVVNYIQHVSRDANDKPLEAVKIAKCGE 198          
BLAST of CK938089 vs. ExPASy Swiss-Prot
Match: PPID_YEAST (Peptidyl-prolyl cis-trans isomerase CPR6 OS=Saccharomyces cerevisiae GN=CPR6 PE=1 SV=1)

HSP 1 Score: 164.466 bits (415), Expect = 7.478e-40
Identity = 88/169 (52.07%), Postives = 105/169 (62.13%), Query Frame = 1
Query:  154 KVYFDVEIAGKPAGRVVMGLFGKAVPKTAENFRALCTGEKGIGKSGK--PLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAE--GRQNGTPKSKVVIADSG 648
            K +FD+ I GKP GR+V  L+   VPKTAENF  LC G  G+ K+    PL YKGS FHR+I  FM Q            ESIY EKF DENF +KH  P LLSMANAGP+TNGSQ FIT V T  LDG+HVVFG+V+ G  +V  +E +   ++N  P   V I D G
Sbjct:    5 KTFFDISIGGKPQGRIVFELYNDIVPKTAENFLKLCEGNAGMAKTKPDVPLSYKGSIFHRVIKDFMCQFGDFTNFNGTGGESIYDEKFEDENFTVKHDKPFLLSMANAGPNTNGSQAFITCVPTPHLDGKHVVFGEVIQGKRIVRLIENQQCDQENNKPLRDVKIDDCG 173          
BLAST of CK938089 vs. ExPASy Swiss-Prot
Match: CYPH_UROFA (Peptidyl-prolyl cis-trans isomerase OS=Uromyces fabae GN=PIG28 PE=2 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.767e-40
Identity = 86/164 (52.44%), Postives = 101/164 (61.59%), Query Frame = 1
Query:  160 YFDVEIAGKPAGRVVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYK-VEAEGRQNGTPKSKVVIADSG 648
            YFDV   GKP GR+V  L+   VP+T  NFR LC    G G       +K S FHR+IP FM+Q            ESIYG+KF DENF+ KH   G+LSMANAGP+TNGSQFFIT   T WLDG+HVVFGKV+ G D V K +E  G Q+G   S + I D G
Sbjct:    5 YFDVSSNGKPLGRIVFELYDDVVPRTTNNFRQLCLNPPGKG-------FKHSIFHRVIPDFMIQGGDFTNGNGTGGESIYGKKFEDENFQKKHVERGMLSMANAGPNTNGSQFFITVTKTPWLDGKHVVFGKVIEGYDQVVKAMEKTGSQSGKTSSVLKIEDCG 161          
BLAST of CK938089 vs. ExPASy Swiss-Prot
Match: CYPD_YEAST (Peptidyl-prolyl cis-trans isomerase D OS=Saccharomyces cerevisiae GN=CPR5 PE=1 SV=1)

HSP 1 Score: 164.081 bits (414), Expect = 9.767e-40
Identity = 89/184 (48.37%), Postives = 114/184 (61.96%), Query Frame = 1
Query:  103 SSIQAKKSDQNLKEITNKVYFDVEIAGKPAGRVVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVIADSGE 651
            ++I AK+      EIT+KVYFD+    K  GR+VMGL+G   P+T ENF  L      I +  K + Y  S FHR+IP+FM+Q            +SI+G  F DENF +KH  PG LSMAN G +TNGSQFFITTV   WLDG+HVVFG+VL GMDVV+ +E  +      P  +V+I +SGE
Sbjct:   18 TAIFAKEDTAEDPEITHKVYFDINHGDKQIGRIVMGLYGLTTPQTVENFYQLT-----ISRDPK-MGYLNSIFHRVIPNFMIQGGDFTHRSGIGGKSIFGNTFKDENFDVKHDKPGRLSMANRGKNTNGSQFFITTVPCPWLDGKHVVFGEVLDGMDVVHYIENVKTDSRNMPVKEVIIVESGE 195          
BLAST of CK938089 vs. ExPASy Swiss-Prot
Match: PPID_USTMA (Peptidyl-prolyl cis-trans isomerase D OS=Ustilago maydis GN=CPR6 PE=3 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 6.331e-39
Identity = 87/171 (50.88%), Postives = 106/171 (61.99%), Query Frame = 1
Query:  157 VYFDVEIAGKPAGR-----VVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEA-EGRQNGTPKSKVVIADSGE 651
            VY D+     PA R     +V+ L+   VP+TAENFR LCT    +  +G+PL ++ S FHR+IP FM+Q            ESIYGEKF DE+   KH  P LLSMANAG +TNGSQFFITTV T  LDG+HVVFG+VL G  VV +VE+ E   +  PK  V I D GE
Sbjct:   15 VYLDLAFGSSPASRPGSNRIVLELYADRVPRTAENFRVLCTNTSKLASTGQPLSFRNSIFHRVIPKFMIQGGDFTRADGTGGESIYGEKFQDEDLTGKHDVPFLLSMANAGANTNGSQFFITTVPTPHLDGKHVVFGRVLKGKGVVRRVESVETVASDRPKEDVKIVDCGE 185          
The following BLAST results are available for this feature:
BLAST of CK938089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 224
Match NameE-valueIdentityDescription
CYP1_BRUMA1.968e-4051.45Peptidyl-prolyl cis-trans isomerase 1 OS=Brugia ma... [more]
PPID_CRYNE2.570e-4053.37Peptidyl-prolyl cis-trans isomerase D OS=Cryptococ... [more]
PPIH_SCHPO3.357e-4052.10Peptidyl-prolyl cis-trans isomerase cyp3 OS=Schizo... [more]
PPIH_MOUSE3.357e-4053.59Peptidyl-prolyl cis-trans isomerase H OS=Mus muscu... [more]
PPIH_EMENI5.726e-4050.60Peptidyl-prolyl cis-trans isomerase H OS=Emericell... [more]
CYPB_YEAST5.726e-4049.25Peptidyl-prolyl cis-trans isomerase B OS=Saccharom... [more]
PPID_YEAST7.478e-4052.07Peptidyl-prolyl cis-trans isomerase CPR6 OS=Saccha... [more]
CYPH_UROFA9.767e-4052.44Peptidyl-prolyl cis-trans isomerase OS=Uromyces fa... [more]
CYPD_YEAST9.767e-4048.37Peptidyl-prolyl cis-trans isomerase D OS=Saccharom... [more]
PPID_USTMA6.331e-3950.88Peptidyl-prolyl cis-trans isomerase D OS=Ustilago ... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004478_B07 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0002_IVF_B07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938089 ID=CK938089; Name=CK938089; organism=Citrus sinensis; type=EST; length=885bp
GGGGGAGTGACTGCGAAACGAGAAACAACGAAGTGATACATGGCTTCGAC
AAATTTGCTTCCACTCACGATGCTATGGGCTGTTGTCCTGTTGGCCACTT
TCTCTTCAATTCAGGCGAAGAAATCGGATCAGAATTTGAAAGAAATCACA
AACAAAGTTTACTTTGACGTTGAGATTGCCGGAAAACCTGCCGGACGTGT
TGTAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATTTCC
GAGCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGTGGGAAGCCACTC
CACTACAAGGGAAGTACGTTTCATAGGATTATTCCCAGCTTTATGCTTCA
AGGAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGAGAGTCAATTTATG
GAGAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCACACCGGCCCAGGG
CTTTTGTCAATGGCAAATGCTGGGCCAGACACCAATGGTTCACAATTCTT
CATTACAACTGTGACAACTAGCTGGTTGGATGGCAGGCATGTTGTATTTG
GAAAGGTGCTATCGGGGATGGATGTAGTTTACAAGGTTGAAGCTGAAGGG
AGGCAGAATGGCACTCCGAAGAGCAAAGTCGTCATTGCAGACAGCGGTGA
ACTTCCTCTGTGATTTCCCCCATAATTATATAATTACGCTATACACCTTT
TTAATCCTCTCGTCTTTTCAACCTTCATGAAGATACTCTTAATTTGCCTA
TTTATCATGTAATAGACATTTTAAAATGTCCTAGGTTGTTTGCCAAGTTG
GTGCTTCATTTTAAGGGGATCCTTTTCTCTGATAGCTATCTCATCACATT
TAGTGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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