CK938089

Overview
NameCK938089
Unique NameCK938089
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Developing fruit albedo at 80 DAFB in pTriplEx2 vectorcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK938089 vs. ExPASy Swiss-Prot
Match: PPIB_SCHPO (Peptidyl-prolyl cis-trans isomerase B OS=Schizosaccharomyces pombe GN=cyp4 PE=2 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 6.748e-49
Identity = 100/171 (58.48%), Postives = 119/171 (69.59%), Query Frame = 1
Query:  142 EITNKVYFDVEIAGKPAGRVVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKV-EAEGRQNGTPKSKVVIADSGE 651
            ++T+ VYFD++   +  GRV +GLFGK VPKTAENFRAL TGEKG G       Y+GS FHR+IP+FM+Q            +SIYG +FPDENFKL H  PGLLSMANAGPD+NGSQFFITTV T WLDG HVVFG+VLSG D+V K+ +AE      P   V I  SG+
Sbjct:   24 KVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFG-------YEGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSNGSQFFITTVKTPWLDGHHVVFGEVLSGYDIVKKISKAETDNRDKPLEDVKIIKSGQ 187          
BLAST of CK938089 vs. ExPASy Swiss-Prot
Match: PPIB_GIBZE (Peptidyl-prolyl cis-trans isomerase B OS=Gibberella zeae GN=CPR2 PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 6.748e-49
Identity = 100/171 (58.48%), Postives = 121/171 (70.76%), Query Frame = 1
Query:  142 EITNKVYFDVEIAGKPAGRVVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVIADSGE 651
            +IT+KVYFD+    +P GRVVMGL+GK VP+T ENFRAL TGEKG G       Y+GS FHR+I +FM+Q            +SIYG++F DENFKLKHT  GLLSMANAG DTNGSQFFITTV TSWLDG+HVVFG+VL G +++ K+E ++      P   V IA SGE
Sbjct:   32 KITHKVYFDITQGDQPLGRVVMGLYGKTVPETTENFRALATGEKGFG-------YEGSAFHRVIKNFMIQGGDFTKGDGTGGKSIYGDRFKDENFKLKHTKKGLLSMANAGRDTNGSQFFITTVVTSWLDGKHVVFGEVLEGYEIIEKIENSKTGAADRPVEAVKIAKSGE 195          
BLAST of CK938089 vs. ExPASy Swiss-Prot
Match: CYPB_VICFA (Peptidyl-prolyl cis-trans isomerase, chloroplastic OS=Vicia faba PE=1 SV=1)

HSP 1 Score: 194.126 bits (492), Expect = 8.813e-49
Identity = 97/172 (56.40%), Postives = 122/172 (70.93%), Query Frame = 1
Query:  142 EITNKVYFDVEIAGKPAGRVVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAE--GRQNGTPKSKVVIADSGE 651
            ++T+K++FD+EI G+ AGR+V+GLFG AVPKT ENF+ L TG KG G       Y+GS FHRIIP+FM+Q             SIYG KF DE+F LKH GPG+LSMANAGP+TNGSQFFI TV T WLD RHVVFG V+ G+DVV ++E++   + + +PK    IA SGE
Sbjct:   79 KVTSKIFFDIEIGGESAGRIVIGLFGDAVPKTVENFKTLSTGAKGYG-------YQGSFFHRIIPNFMIQGGDFTEGNGTGGVSIYGSKFEDESFDLKHVGPGVLSMANAGPNTNGSQFFICTVPTPWLDNRHVVFGHVIEGLDVVKQLESQETSKLDNSPKKPCKIAKSGE 243          
BLAST of CK938089 vs. ExPASy Swiss-Prot
Match: PPIA_RABIT (Peptidyl-prolyl cis-trans isomerase A OS=Oryctolagus cuniculus GN=PPIA PE=2 SV=3)

HSP 1 Score: 193.741 bits (491), Expect = 1.151e-48
Identity = 97/165 (58.79%), Postives = 112/165 (67.88%), Query Frame = 1
Query:  157 VYFDVEIAGKPAGRVVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVIADSGE 651
            V+FD+ + G+P GRV   LF   VPKTAENFRAL TGEKG G       YKGS FHRIIP FM Q            +SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFG+V  GM +V  +E  G +NG    K+ IA+ G+
Sbjct:    6 VFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSCFHRIIPGFMCQGGDFTRHNGTGGKSIYGEKFEDENFLLKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGRVKEGMSIVEAMEHFGSENGKTSKKITIANCGQ 163          
BLAST of CK938089 vs. ExPASy Swiss-Prot
Match: PPID_AMAMU (Peptidyl-prolyl cis-trans isomerase D OS=Amanita muscaria GN=Cyp40 PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.503e-48
Identity = 99/166 (59.64%), Postives = 114/166 (68.67%), Query Frame = 1
Query:  157 VYFDVEIAGKPAGRVVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNG-TPKSKVVIADSGE 651
            V+FD+ I G+ AGRV   L+   VPKTAENFRALCTGEKG+G+SGKPL YKGS FHR+I  FM Q            ESIYGEKF DE F + H+ P LLSMANAGP+TNGSQFFIT   T  LDG+HVVFG+V+ G  VV  +E     NG  PK  VVIAD G+
Sbjct:    7 VFFDIAIGGQLAGRVAFRLYSDLVPKTAENFRALCTGEKGLGQSGKPLWYKGSAFHRVIKGFMCQGGDFTAGNGTGGESIYGEKFEDEGFPVHHSRPFLLSMANAGPNTNGSQFFITVSATPHLDGKHVVFGEVIKGRSVVRTIENNPATNGDVPKEPVVIADCGQ 172          
BLAST of CK938089 vs. ExPASy Swiss-Prot
Match: PPIB_EMENI (Peptidyl-prolyl cis-trans isomerase B OS=Emericella nidulans GN=cpr2 PE=3 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.503e-48
Identity = 106/203 (52.22%), Postives = 133/203 (65.52%), Query Frame = 1
Query:   49 TNLLPLTMLWAVVLLATFSSIQAKKSDQNLKEITNKVYFDVEIAGKPAGRVVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE--AEGRQNGTPKSKVVIADSGE 651
            T+L  L + + +V+    + + A  S+    +ITNKVYFD++   +  GR+V+GL+GK VP+TAENFRAL TGEKG G       Y+GS FHR+I  FM+Q            +SIYG KF DENFKL+HT  GLLSMANAG DTNGSQFFITT  T WLDG+HVVFG+VL G D+V K++   +GR N  P   V I  SGE
Sbjct:    2 TSLKSLFLSFFLVVALGLALVNA--SEPRGPKITNKVYFDIQHGDESLGRIVLGLYGKTVPETAENFRALATGEKGFG-------YEGSNFHRVIKDFMIQGGDFTRGDGTGGKSIYGAKFKDENFKLRHTKTGLLSMANAGKDTNGSQFFITTAVTPWLDGKHVVFGEVLEGYDIVDKIQNVPKGR-NDRPLKDVKIVKSGE 194          
BLAST of CK938089 vs. ExPASy Swiss-Prot
Match: PPIA_MOUSE (Peptidyl-prolyl cis-trans isomerase A OS=Mus musculus GN=Ppia PE=1 SV=2)

HSP 1 Score: 191.815 bits (486), Expect = 4.374e-48
Identity = 97/165 (58.79%), Postives = 111/165 (67.27%), Query Frame = 1
Query:  157 VYFDVEIAGKPAGRVVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVIADSGE 651
            V+FD+    +P GRV   LF   VPKTAENFRAL TGEKG G       YKGS+FHRIIP FM Q             SIYGEKF DENF LKHTGPG+LSMANAGP+TNGSQFFI T  T WLDG+HVVFGKV  GM++V  +E  G +NG    K+ I+D G+
Sbjct:    6 VFFDITADDEPLGRVSFELFADKVPKTAENFRALSTGEKGFG-------YKGSSFHRIIPGFMCQGGDFTRHNGTGGRSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITISDCGQ 163          
BLAST of CK938089 vs. ExPASy Swiss-Prot
Match: CYPH_ALLCE (Peptidyl-prolyl cis-trans isomerase OS=Allium cepa GN=CYP PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 7.461e-48
Identity = 96/149 (64.43%), Postives = 108/149 (72.48%), Query Frame = 1
Query:  205 MGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVIADSGE 651
            M LF   VP+TAENFRALCTGEKG+G   KPLHYKGS+FHR+IP FM Q            ESIYG KF DENF  KHTGPG+LSMANAGP TNGSQFFI T  T+WLDG+HVVFG+V+ GMDVV  +E  G Q+G  K  V IAD G+
Sbjct:    1 MELFQDVVPQTAENFRALCTGEKGMGDR-KPLHYKGSSFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFKDENFIKKHTGPGVLSMANAGPGTNGSQFFICTEKTAWLDGKHVVFGQVVEGMDVVRAIEKVGSQSGQTKKPVKIADCGQ 148          
BLAST of CK938089 vs. ExPASy Swiss-Prot
Match: PPID_MOUSE (40 kDa peptidyl-prolyl cis-trans isomerase OS=Mus musculus GN=Ppid PE=1 SV=3)

HSP 1 Score: 190.274 bits (482), Expect = 1.273e-47
Identity = 98/167 (58.68%), Postives = 114/167 (68.26%), Query Frame = 1
Query:  154 KVYFDVEIAGKPAGRVVMGLFGKAVPKTAENFRALCTGEKGIGKS-GKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVEAEGRQNGTPKSKVVIADSGE 651
            +V+FDV+I G+  GR+V+ LF   VPKTAENFRALCTGEKG G + GKPLH+KG  FHRII  FM+Q            ESIYGEKF DENF  KH   GLLSMANAGP+TNGSQFFITTV T  LDG+HVVFG+V+ G+ V   +E        P    VIA+ GE
Sbjct:   17 RVFFDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGTGSTTGKPLHFKGCPFHRIIKKFMIQGGDFSNQNGTGGESIYGEKFEDENFHYKHDREGLLSMANAGPNTNGSQFFITTVPTPHLDGKHVVFGQVIKGLGVARTLENVEVNGEKPAKLCVIAECGE 183          
BLAST of CK938089 vs. ExPASy Swiss-Prot
Match: PPID_DICDI (Peptidyl-prolyl cis-trans isomerase D, mitochondrial OS=Dictyostelium discoideum GN=cypD PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.273e-47
Identity = 100/170 (58.82%), Postives = 118/170 (69.41%), Query Frame = 1
Query:  145 ITNKVYFDVEIAGKPAGRVVMGLFGKAVPKTAENFRALCTGEKGIGKSGKPLHYKGSTFHRIIPSFMLQXXXXXXXXXXXXESIYGEKFPDENFKLKHTGPGLLSMANAGPDTNGSQFFITTVTTSWLDGRHVVFGKVLSGMDVVYKVE-AEGRQNGTPKSKVVIADSGE 651
            I NKV+F ++    P GRVV  L+   VPKTAENFRALCTGEKGIGKSGKPLHYKGS+FHR+I +FM+Q            ESIYG  F DENF +KH   G LSMANAG +TNGSQFFITT  T  L+G H VFG+V+ G D+V KVE AE  ++  PK+  VI D G+
Sbjct:    5 IRNKVFFQIKQGNTPLGRVVFELYNDIVPKTAENFRALCTGEKGIGKSGKPLHYKGSSFHRVIKNFMVQGGDFTHGTGIGGESIYGRTFNDENFLVKHK-IGCLSMANAGKNTNGSQFFITTAETPHLNGGHTVFGEVVEGFDIVKKVENAETDRSDRPKAACVIEDCGQ 173          
The following BLAST results are available for this feature:
BLAST of CK938089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 224
Match NameE-valueIdentityDescription
PPIB_SCHPO6.748e-4958.48Peptidyl-prolyl cis-trans isomerase B OS=Schizosac... [more]
PPIB_GIBZE6.748e-4958.48Peptidyl-prolyl cis-trans isomerase B OS=Gibberell... [more]
CYPB_VICFA8.813e-4956.40Peptidyl-prolyl cis-trans isomerase, chloroplastic... [more]
PPIA_RABIT1.151e-4858.79Peptidyl-prolyl cis-trans isomerase A OS=Oryctolag... [more]
PPID_AMAMU1.503e-4859.64Peptidyl-prolyl cis-trans isomerase D OS=Amanita m... [more]
PPIB_EMENI1.503e-4852.22Peptidyl-prolyl cis-trans isomerase B OS=Emericell... [more]
PPIA_MOUSE4.374e-4858.79Peptidyl-prolyl cis-trans isomerase A OS=Mus muscu... [more]
CYPH_ALLCE7.461e-4864.43Peptidyl-prolyl cis-trans isomerase OS=Allium cepa... [more]
PPID_MOUSE1.273e-4758.6840 kDa peptidyl-prolyl cis-trans isomerase OS=Mus ... [more]
PPID_DICDI1.273e-4758.82Peptidyl-prolyl cis-trans isomerase D, mitochondri... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004478_B07 Developing fruit albedo at 80 DAFB in pTriplEx2 vector Citrus sinensis cDNA clone A80DAB0002_IVF_B07 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK938089 ID=CK938089; Name=CK938089; organism=Citrus sinensis; type=EST; length=885bp
GGGGGAGTGACTGCGAAACGAGAAACAACGAAGTGATACATGGCTTCGAC
AAATTTGCTTCCACTCACGATGCTATGGGCTGTTGTCCTGTTGGCCACTT
TCTCTTCAATTCAGGCGAAGAAATCGGATCAGAATTTGAAAGAAATCACA
AACAAAGTTTACTTTGACGTTGAGATTGCCGGAAAACCTGCCGGACGTGT
TGTAATGGGTCTCTTTGGAAAGGCAGTCCCTAAAACTGCAGAAAATTTCC
GAGCTTTGTGCACAGGGGAGAAAGGGATTGGCAAGAGTGGGAAGCCACTC
CACTACAAGGGAAGTACGTTTCATAGGATTATTCCCAGCTTTATGCTTCA
AGGAGGTGATTTCACTCTTGGTGATGGAAGAGGTGGAGAGTCAATTTATG
GAGAGAAGTTCCCTGACGAAAATTTCAAACTGAAGCACACCGGCCCAGGG
CTTTTGTCAATGGCAAATGCTGGGCCAGACACCAATGGTTCACAATTCTT
CATTACAACTGTGACAACTAGCTGGTTGGATGGCAGGCATGTTGTATTTG
GAAAGGTGCTATCGGGGATGGATGTAGTTTACAAGGTTGAAGCTGAAGGG
AGGCAGAATGGCACTCCGAAGAGCAAAGTCGTCATTGCAGACAGCGGTGA
ACTTCCTCTGTGATTTCCCCCATAATTATATAATTACGCTATACACCTTT
TTAATCCTCTCGTCTTTTCAACCTTCATGAAGATACTCTTAATTTGCCTA
TTTATCATGTAATAGACATTTTAAAATGTCCTAGGTTGTTTGCCAAGTTG
GTGCTTCATTTTAAGGGGATCCTTTTCTCTGATAGCTATCTCATCACATT
TAGTGCTAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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