FC921784
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC921784 vs. ExPASy Swiss-Prot
Match: IDH3A_RAT (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Rattus norvegicus GN=Idh3a PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.928e-12 Identity = 37/91 (40.66%), Postives = 56/91 (61.54%), Query Frame = 3 Query: 114 GAPRAVTLLPGDGIGPLVTGAVEQVMEAMHAPVYFEKCEV-----HGDMKRVPEEVIKSIKKNKVCLEGGLATPMGGGVSSLNLLLRRELD 371 G + VTL+PGDGIGP ++ +V ++ +A AP+ +E+ V G +P E +S+ KNK+ L+G L TP+ G S+NLLLR+ D Sbjct: 29 GGVQTVTLIPGDGIGPEISASVMKIFDAAKAPIQWEERNVTAIQGPGGKWMIPPEAKESMDKNKMGLKGPLKTPIAAGHPSMNLLLRKTFD 119
BLAST of FC921784 vs. ExPASy Swiss-Prot
Match: IDH3A_MOUSE (Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Mus musculus GN=Idh3a PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.928e-12 Identity = 37/91 (40.66%), Postives = 56/91 (61.54%), Query Frame = 3 Query: 114 GAPRAVTLLPGDGIGPLVTGAVEQVMEAMHAPVYFEKCEV-----HGDMKRVPEEVIKSIKKNKVCLEGGLATPMGGGVSSLNLLLRRELD 371 G + VTL+PGDGIGP ++ +V ++ +A AP+ +E+ V G +P E +S+ KNK+ L+G L TP+ G S+NLLLR+ D Sbjct: 29 GGVQTVTLIPGDGIGPEISASVMKIFDAAKAPIQWEERNVTAIQGPGGKWMIPPEAKESMDKNKMGLKGPLKTPIAAGHPSMNLLLRKTFD 119
BLAST of FC921784 vs. ExPASy Swiss-Prot
Match: IDH2_YEAST (Isocitrate dehydrogenase [NAD] subunit 2, mitochondrial OS=Saccharomyces cerevisiae GN=IDH2 PE=1 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 3.928e-12 Identity = 37/95 (38.95%), Postives = 57/95 (60.00%), Query Frame = 3 Query: 90 TYMPRPGDGAPRAVTLLPGDGIGPLVTGAVEQVMEAMHAPVYFEKCEVH----GDMKRVPEEVIKSIKKNKVCLEGGLATPMGGGVSSLNLLLRR 362 T P P G V+ + GDGIGP ++ +V+++ A + P+ +E C+V + +P+ ++SI KN V L+G LATP+G G SLNL LR+ Sbjct: 27 TGKPNPSTGK-YTVSFIEGDGIGPEISKSVKKIFSAANVPIEWESCDVSPIFVNGLTTIPDPAVQSITKNLVALKGPLATPIGKGHRSLNLTLRK 120
BLAST of FC921784 vs. ExPASy Swiss-Prot
Match: IDH3A_DROME (Probable isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial OS=Drosophila melanogaster GN=l(1)G0156 PE=2 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.701e-12 Identity = 41/105 (39.05%), Postives = 61/105 (58.10%), Query Frame = 3 Query: 72 TPTRSVTYMPRPGDGAPRAVTLLPGDGIGPLVTGAVEQVMEAMHAPVYFEKCEV----HGDMK-RVPEEVIKSIKKNKVCLEGGLATPMGGGVSSLNLLLRRELD 371 TP S +Y + VTL+PGDGIGP ++ AV+++ A + P+ +E +V D K +P+ I S+ NK+ L+G L TP+G G SLNL LR+E + Sbjct: 36 TPAASRSY-----SSGTKKVTLIPGDGIGPEISAAVQKIFTAANVPIEWEAVDVTPVRGPDGKFGIPQAAIDSVNTNKIGLKGPLMTPVGKGHRSLNLALRKEFN 135
BLAST of FC921784 vs. ExPASy Swiss-Prot
Match: IDH6_ARATH (Isocitrate dehydrogenase [NAD] catalytic subunit 6, mitochondrial OS=Arabidopsis thaliana GN=IDH6 PE=1 SV=2) HSP 1 Score: 67.0106 bits (162), Expect = 3.326e-11 Identity = 43/119 (36.13%), Postives = 66/119 (55.46%), Query Frame = 3 Query: 30 QILSKSSDQCSPFLTPTRSVTYMPRPGDGAPRAVTLLPGDGIGPLVTGAVEQVMEAMHAPVYFEKCEVHGDMKR-----VPEEVIKSIKKNKVCLEGGLATPMGGGVSSLNLLLRRELD 371 QIL SS PF++ +R+ P TL PGDGIGP + +V+QV A + +++ V ++ + + ++S+ KNKV L+G +ATP+G G SLNL LR+EL+ Sbjct: 18 QILGTSSSSSGPFISVSRAFF-----SSSTPIKATLFPGDGIGPEIAESVKQVFTAADVVIDWDEQFVGTEVDPRTNSFLTWDNLQSVLKNKVGLKGPMATPIGKGHRSLNLTLRKELN 131
BLAST of FC921784 vs. ExPASy Swiss-Prot
Match: IDH2_KLULA (Isocitrate dehydrogenase [NAD] subunit 2, mitochondrial OS=Kluyveromyces lactis GN=IDH2 PE=3 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 4.343e-11 Identity = 35/95 (36.84%), Postives = 54/95 (56.84%), Query Frame = 3 Query: 90 TYMPRPGDGAPRAVTLLPGDGIGPLVTGAVEQVMEAMHAPVYFEKCEVH----GDMKRVPEEVIKSIKKNKVCLEGGLATPMGGGVSSLNLLLRR 362 T P P G V+ + GDG+GP ++ +V+ + A P+ +E C+V + +P+ + SI KN + L+G LATP+G G SLNL LR+ Sbjct: 26 TGKPNPKTGK-YTVSFIEGDGVGPEISKSVKAIFSAAKVPIEWESCDVSPIFVNGLTTIPDPAVASINKNLIALKGPLATPIGKGHRSLNLTLRK 119
BLAST of FC921784 vs. ExPASy Swiss-Prot
Match: IDH_THET8 (Isocitrate dehydrogenase [NADP] OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) GN=icd PE=1 SV=2) HSP 1 Score: 66.2402 bits (160), Expect = 5.673e-11 Identity = 36/86 (41.86%), Postives = 53/86 (61.63%), Query Frame = 3 Query: 123 RAVTLLPGDGIGPLVTGAVEQVMEAMHAPVYFEKCEVHGDMKR------VPEEVIKSIKKNKVCLEGGLATPMGGGVSSLNLLLRR 362 + +T++PGDGIGP A +V+EA AP+ +E E + R VP+E I+SI+K +V L+G L TP+G G S N+ LR+ Sbjct: 20 KLITVIPGDGIGPECVEATLKVLEAAKAPLAYEVREAGASVFRRGIASGVPQETIESIRKTRVVLKGPLETPVGYGEKSANVTLRK 105
BLAST of FC921784 vs. ExPASy Swiss-Prot
Match: IDH1_SCHPO (Isocitrate dehydrogenase [NAD] subunit 1, mitochondrial OS=Schizosaccharomyces pombe GN=idh1 PE=1 SV=1) HSP 1 Score: 65.855 bits (159), Expect = 7.409e-11 Identity = 39/93 (41.94%), Postives = 55/93 (59.14%), Query Frame = 3 Query: 114 GAPRAVTLLPGDGIGPLVTGAVEQVMEAMHAPVYFEKCEVHGDMKR------VPEEVIKSIKKNKVCLEGGLATPM-GGGVSSLNLLLRRELD 371 G VTL+PGDGIG + AV ++ + + P+ FE+ +V G K E I+S+K+NKV L+G L TP GG +S N+ LR+ELD Sbjct: 18 GGKYTVTLIPGDGIGRETSNAVTEIFKTANVPIEFEEIDVTGMEKNNKSSGDALHEAIQSLKRNKVGLKGILFTPFEKGGHTSFNVALRKELD 110 The following BLAST results are available for this feature:
BLAST of FC921784 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >FC921784 ID=FC921784; Name=FC921784; organism=Citrus sinensis; type=EST; length=373bpback to top |