CX675417

Overview
NameCX675417
Unique NameCX675417
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length863
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675417 vs. ExPASy Swiss-Prot
Match: LICH_HUMAN (Lysosomal acid lipase/cholesteryl ester hydrolase OS=Homo sapiens GN=LIPA PE=1 SV=2)

HSP 1 Score: 98.5969 bits (244), Expect = 4.814e-20
Identity = 78/250 (31.20%), Postives = 126/250 (50.40%), Query Frame = -1
Query:  147 LQHVHDQTGQKP-HYVGHSLGTLIALASFSK-DQLVNKLRSAALLSPIAYVGQMTSPLAK-NAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICKKPGVD--CTNL---LNSFTGQNCCLKSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNEEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLKD---HEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLM 863
            +  + ++TGQ+  +YVGHS GT I   +FS+  +L  +++    L P+A V   TSP+AK     + L + L+  G  EF P+   +  L  ++C    +   C NL   L  F  +N  L  S VDV+  H P  TS +NM+H +Q ++      +D+ +  +N  HY Q  PP YN+  +   +P  +  GG D L+DV DV +LL  + +   HE          ++ H D++ G +A   LY  ++
Sbjct:  156 INFILNKTGQEQVYYVGHSQGTTIGFIAFSQIPELAKRIKMFFALGPVASVAFCTSPMAKLGRLPDHLIKDLF--GDKEFLPQSAFLKWLGTHVCTHVILKELCGNLCFLLCGFNERN--LNMSRVDVYTTHSPAGTSVQNMLHWSQAVKFQKFQAFDWGSSAKNYFHYNQSYPPTYNVKDML--VPTAVWSGGHDWLADVYDVNILLTQITNLVFHES-------IPEWEHLDFIWGLDAPWRLYNKII 392          
BLAST of CX675417 vs. ExPASy Swiss-Prot
Match: LICH_MACFA (Lysosomal acid lipase/cholesteryl ester hydrolase OS=Macaca fascicularis GN=LIPA PE=2 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 6.287e-20
Identity = 77/254 (30.31%), Postives = 127/254 (50.00%), Query Frame = -1
Query:  135 LQHVHDQTGQKP-HYVGHSLGTLIALASFSK-DQLVNKLRSAALLSPIAYVGQMTSPLAK-NAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICKKPGVD--CTNL---LNSFTGQNCCLKSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNEEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLKD---HEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFK 863
            +  + ++TGQ+  +YVGHS GT I   +FS+  +L  +++    L+P+  V   TSP+AK     + L + L+  G  EF P+   +  L  ++C    +   C NL   L  F  +N  L  S VDV+  H P  TS +NM+H +Q ++      +D+ +  +N  HY Q  PP YN+  +   +P  +  GG D L+DV D+ +LL  + +   HE          ++ H D++ G +A   LY  ++   K
Sbjct:  156 INFILNKTGQEQVYYVGHSQGTTIGFIAFSQIPELAKRIKMFFALAPVVSVDFCTSPMAKLGRLPDLLIKDLF--GDKEFLPQSAFLKWLGTHVCTHVILKELCGNLCFLLCGFNERN--LNMSRVDVYTTHSPAGTSVQNMLHWSQAVKFQKFQAFDWGSSAKNYFHYNQSYPPTYNVKDML--VPTAVWSGGHDWLADVYDINILLTQITNLVFHES-------IPEWEHLDFIWGLDAPWRLYNKIINLMK 396          
BLAST of CX675417 vs. ExPASy Swiss-Prot
Match: LIPN_HUMAN (Lipase member N OS=Homo sapiens GN=LIPN PE=2 SV=2)

HSP 1 Score: 97.0561 bits (240), Expect = 1.401e-19
Identity = 68/249 (27.31%), Postives = 120/249 (48.19%), Query Frame = -1
Query:  135 LQHVHDQTGQ-KPHYVGHSLGTLIALASFSK-DQLVNKLRSAALLSPIAYVGQMTSPLAKN-AADNFLAEALYWLGLDEFDPRGEAVVKLLKNICKKP--GVDCTNLLNSFTGQNCC-LKSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNEEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLKDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFK 863
            +  + ++TGQ K +++GHSLGT I   +FS   +L  +++    L P       T    +     N + +A++  G   F    +        IC      + C+  ++ + G N   +  S +DV++ H P  +S  N++H+ Q+        YD+ N+ +N KHY Q +PP+Y++T++   +P  +  GG D L    DV  +L  +K     KL+     D+ H D+V G +A Q +Y  ++A  K
Sbjct:  155 IDFIVNKTGQEKLYFIGHSLGTTIGFVAFSTMPELAQRIKMNFALGPTISFKYPTGIFTRFFLLPNSIIKAVF--GTKGFFLEDKKTKIASTKICNNKILWLICSEFMSLWAGSNKKNMNQSRMDVYMSHAPTGSSVHNILHIKQLYHSDEFRAYDWGNDADNMKHYNQSHPPIYDLTAM--KVPTAIWAGGHDVLVTPQDVARILPQIKSLHYFKLL----PDWNHFDFVWGLDAPQRMYSEIIALMK 395          
BLAST of CX675417 vs. ExPASy Swiss-Prot
Match: LICH_MOUSE (Lysosomal acid lipase/cholesteryl ester hydrolase OS=Mus musculus GN=Lipa PE=2 SV=1)

HSP 1 Score: 96.2857 bits (238), Expect = 2.389e-19
Identity = 74/253 (29.25%), Postives = 127/253 (50.20%), Query Frame = -1
Query:  135 LQHVHDQTGQKP-HYVGHSLGTLIALASFSK-DQLVNKLRSAALLSPIAYVGQMTSPLAK--NAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICKKPGVD--CTN---LLNSFTGQNCCLKSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNEEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLKDHEGDKLVVQYR-QDYAHADYVMGENAGQVLYEPLMAFFK 863
            + ++ ++TGQ+  +YVGHS G  I   +FS+  +L  K++   +L+P+  +   + PL +     D  L +     G  +F P+   +  L  ++C    +   C N   LL  F  +N  L  S VDV+  H P     +NM+H  Q+ +   +  +D+ + E+N  HY Q  PP YN+ ++   LP  L  GG D L+D+ND+ +LL  +      KLV      ++ H D++ G +A   LY+ +++  K
Sbjct:  154 INYILNKTGQEQIYYVGHSQGCTIGFIAFSQMPELAKKIKMFLVLAPVLSLNFASGPLLQLGRLPDPLLKDMF---GQKQFLPQSAMLKWLSIHVCTHVIMKELCANVFFLLCGFNEKN--LNMSRVDVYTTHCPAELLVQNMLHWGQVFKYRKLQAFDWGSSEKNYFHYNQSFPPSYNIKNM--RLPTALWSGGRDWLADINDITILLTQI-----PKLVYHKNIPEWDHLDFIWGLDAPWKLYDEIISLMK 394          
BLAST of CX675417 vs. ExPASy Swiss-Prot
Match: LIPN_MOUSE (Lipase member N OS=Mus musculus GN=Lipn PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.450e-18
Identity = 73/255 (28.63%), Postives = 123/255 (48.24%), Query Frame = -1
Query:  135 LQHVHDQTGQ-KPHYVGHSLGTLIALASFSK-DQLVNKLRSAALLSPIAYVGQMTSP------LAKNAADNFLAEALYWLGLDEFDPRGEAVV----KLLKNICKKPGVDCTNLLNSFTGQNCCLKSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNEEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLKDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFK 863
            +  + ++TGQ K +++GHSLGT I   +FS   +L  +++    L P+      TS       L K+     L      + L++ + R   +     KLL+ +C     +  +L   F  +N  +  S +DV++ H P  +S +NM+H+ Q+ R      YD+ +E EN  HY Q  PPLY++T++   +P  +  GG D L    DV  +L  + +    K       D+ H D+V G +A Q LY  +++  K
Sbjct:  157 IDFIVNKTGQEKLYFIGHSLGTTIGFVAFSTMPELAQRIKMNFALGPVISFKYPTSVFTNLFLLPKSIIK--LVFGTKGVLLEDKNARMSFITFCNQKLLQPLCS----EFMSLWAGFNKKN--MNMSRLDVYMAHAPTGSSIQNMLHIKQLYRSDEFRAYDWGSEAENMNHYNQSYPPLYDLTAM--KVPTAIWAGGHDVLVTPQDVARILPQITNLRYFKQF----PDWNHFDFVWGLDAPQRLYSKIISLMK 397          
BLAST of CX675417 vs. ExPASy Swiss-Prot
Match: LIPM_MOUSE (Lipase member M OS=Mus musculus GN=Lipm PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.506e-18
Identity = 72/251 (28.69%), Postives = 127/251 (50.60%), Query Frame = -1
Query:  135 LQHVHDQTGQKP-HYVGHSLGTLIALASFSK-DQLVNKLRSAALLSPIAYVGQMTSPLAKNAA-DNFLAEALYWLGLDEFDPRGEAVVKLLKNICKKPGVD--CTN---LLNSFTGQNCCLKSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNEEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLKDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLMAFFK 863
            +  +  +TGQK  +YVG+S GT +   +FS   +L +K++    L+PIA V    SP  K     + + + L+  G  EF  +     +L   +C +  +D  C+N   LL  F   N  +  S  +V++ H P  TS +N++H +Q +  G +  +D+ +E +N++   QP P  Y +  +   +P  +  GG D LS+ +DVK LL  + +    K +     ++AH D++ G +A Q +Y  ++   K
Sbjct:  168 INFILQKTGQKKVYYVGYSQGTTMGFIAFSTMPELAHKIKMYFALAPIATVKYARSPGTKFLLLPDMMIKVLF--GRQEFLYQTRFFRQLFIYLCGQMILDQICSNIILLLGGFNTNN--MNMSRANVYVAHTPAGTSVQNILHWSQAVNSGELRAFDWGSETKNQEKCNQPTPIRYKVRDMM--VPTAMWTGGQDWLSNPDDVKTLLSEVTNLIYHKNI----PEWAHVDFIWGLDAPQRVYNEIIHLMK 408          
BLAST of CX675417 vs. ExPASy Swiss-Prot
Match: LIPJ_HUMAN (Lipase member J OS=Homo sapiens GN=LIPJ PE=2 SV=2)

HSP 1 Score: 85.8853 bits (211), Expect = 3.229e-16
Identity = 62/230 (26.96%), Postives = 109/230 (47.39%), Query Frame = -1
Query:  147 YVGHSLGTLIALASFSK-DQLVNKLRSAALLSPIAYVGQMTSPLAKNAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICKKPGVD--CTNLLNSFTGQNCC-LKSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNEEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLKDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLM 824
            YVGHS GT I   +FS   ++  +++    L+P+     + SPL +     + +  + + G  +F P+      +   +C     D  C N+L    G +   L  S +DV+  H P  TS +NM+H +Q++    +  YD+ + + N  HY Q   PLYNMT++  ++   +  G +D L+D  DV +L   + +H   K +  Y     H D + G +    +Y  ++
Sbjct:  137 YVGHSQGTTIGFITFSTISKIAERIKIFFALAPVFSTKYLKSPLIRMTY-KWKSIVMAFSGNKDFLPKTSFKKFVGSKLCPLQIFDKICLNILFMMFGYDPKNLNMSRLDVYFSHNPAGTSVQNMLHWSQLLNSTHLKAYDWGSPDLNLVHYNQTTSPLYNMTNM--NVATAIWNGKSDLLADPEDVNILHSEITNHIYYKTISYYN----HIDSLFGLDVYDQVYHEII 359          
BLAST of CX675417 vs. ExPASy Swiss-Prot
Match: LIPM_HUMAN (Lipase member M OS=Homo sapiens GN=LIPM PE=2 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 7.194e-16
Identity = 69/247 (27.94%), Postives = 122/247 (49.39%), Query Frame = -1
Query:  147 LQHVHDQTGQ-KPHYVGHSLGTLIALASFS-KDQLVNKLRSAALLSPIAYVGQMTSPLAK-NAADNFLAEALYWLGLDEFDPRGEAVVKLLKNICKKPGVD--CTN---LLNSFTGQNCCLKSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNEEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLKDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLM 863
            +  +  +TGQ K +YVG+S GT +   +FS   +L  K++    L+PIA V    SP  K     + + + L+  G  EF  +   + +L+  +C +  +D  C+N   LL  F   N  +  S   V+  H    TS +N++H +Q +  G +  +D+ +E +N +   QP P  Y +  +   +P  +  GG D LS+  DVK+LL  + +    K +     ++AH D++ G +A   +Y  ++
Sbjct:  168 INFILQKTGQEKIYYVGYSQGTTMGFIAFSTMPELAQKIKMYFALAPIATVKHAKSPGTKFLLLPDMMIKGLF--GKKEFLYQTRFLRQLVIYLCGQVILDQICSNIMLLLGGFNTNN--MNMSRASVYAAHTLAGTSVQNILHWSQAVNSGELRAFDWGSETKNLEKCNQPTPVRYRVRDM--TVPTAMWTGGQDWLSNPEDVKMLLSEVTNLIYHKNI----PEWAHVDFIWGLDAPHRMYNEII 404          
BLAST of CX675417 vs. ExPASy Swiss-Prot
Match: LIP3_DROME (Lipase 3 OS=Drosophila melanogaster GN=Lip3 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 2.093e-15
Identity = 75/250 (30.00%), Postives = 113/250 (45.20%), Query Frame = -1
Query:  147 LQHVHDQTGQKP-HYVGHSLGTLIALASFSKDQLVN-KLRSAALLSPIAYVGQMTSPLAKNAA-----DNFLAEALYWLGLDEFDPRGEAVVKLLKNICK--KPGVD-CTNLLNSFTGQNC-CLKSSIVDVFLEHEPQATSTKNMIHVAQMIREGTIAMYDYNNEEENKKHYGQPNPPLYNMTSIPHDLPLFLSYGGADALSDVNDVKLLLESLKDHEGDKLVVQYRQDYAHADYVMGENAGQVLYEPLM 863
            + +V  +TGQ+   YVGHS GT + L   S+    N K++SA LL P AY+G M SPL +  A      N + E     G  EF P  +    L   +C+   P  D C N +    G +   L   +++      P   S    +H  Q    G    +DY     N   YG   PP Y + +     P+ L YG  D + DV+DV+ L + L +   D LV    + +AH D++ G  A + +Y+ ++
Sbjct:  146 IDYVLAKTGQQQVQYVGHSQGTTVYLVMVSERPEYNDKIKSAHLLGPAAYMGNMKSPLTRAFAPILGQPNAIVEV---CGSMEFMPSNKFKQDLGIEMCQATSPYADMCANEIFLIGGYDTEQLDYELLEHIKATSPAGASVNQNLHFCQEYNSGKFRKFDY-TALRNPYEYGSYFPPDYKLKNA--KAPVLLYYGANDWMCDVSDVRKLRDELPNMALDYLVP--FEKWAHLDFIWGTEARKYVYDEVL 387          
The following BLAST results are available for this feature:
BLAST of CX675417 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 19
Match NameE-valueIdentityDescription
LICH_HUMAN4.814e-2031.20Lysosomal acid lipase/cholesteryl ester hydrolase ... [more]
LICH_MACFA6.287e-2030.31Lysosomal acid lipase/cholesteryl ester hydrolase ... [more]
LIPN_HUMAN1.401e-1927.31Lipase member N OS=Homo sapiens GN=LIPN PE=2 SV=2[more]
LICH_MOUSE2.389e-1929.25Lysosomal acid lipase/cholesteryl ester hydrolase ... [more]
LIPN_MOUSE3.450e-1828.63Lipase member N OS=Mus musculus GN=Lipn PE=2 SV=1[more]
LIPM_MOUSE4.506e-1828.69Lipase member M OS=Mus musculus GN=Lipm PE=2 SV=1[more]
LIPJ_HUMAN3.229e-1626.96Lipase member J OS=Homo sapiens GN=LIPJ PE=2 SV=2[more]
LIPM_HUMAN7.194e-1627.94Lipase member M OS=Homo sapiens GN=LIPM PE=2 SV=2[more]
LIP3_DROME2.093e-1530.00Lipase 3 OS=Drosophila melanogaster GN=Lip3 PE=2 S... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_62B03_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62B03-D6-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675417 ID=CX675417; Name=CX675417; organism=Citrus sinensis; type=EST; length=863bp
TTTTTTTTTTTGTATTAACATAAAAGTCATTTAATAAAAAAAGGGTACAT
CTTTAGAGAACCAACACAAATGATTCGAGCAGACTCTCTCTCTTTTTCTT
TCTGTGAGTTGTCTCATTTACATTTTCATTGTAACTTAAAGAAAGCCATG
AGAGGCTCATACAGAACTTGCCCAGCATTTTCACCCATAACATAGTCTGC
ATGAGCATAATCCTGTCTGTACTGAACTACAAGCTTATCTCCCTCATGAT
CTTTGAGGCTCTCCAGCAGCAGTTTCACATCATTGACATCCGAAAGAGCG
TCGGCTCCTCCGTAACTGAGAAAGAGAGGAAGATCATGCGGAATGCTTGT
CATGTTGTATAGAGGCGGATTCGGCTGCCCATAGTGTTTCTTGTTCTCTT
CTTCATTGTTGTAATCGTACATTGCAATGGTTCCTTCTCTAATCATCTGA
GCTACGTGGATCATGTTCTTAGTTGAAGTTGCCTGAGGCTCGTGTTCTAG
AAATACATCTACTATCGAAGACTTTAGGCAGCAGTTTTGGCCTGTGAAAG
AGTTCAATAAGTTGGTACAATCAACTCCAGGTTTTTTGCAAATGTTTTTA
AGAAGTTTGACTACAGCCTCCCCTCTTGGATCAAATTCATCAAGGCCTAA
CCAGTATAATGCCTCGGCTAGAAAGTTATCGGCAGCATTTTTGGCAAGTG
GTGAGGTCATTTGTCCAACATAGGCAATTGGACTAAGCAAGGCAGCTGAC
CTTAACTTGTTCACCAGCTGATCCTTAGAAAATGAAGCGAGAGCAATCAG
AGTTCCCAGTGAATGCCCAACATAGTGTGGTTTCTGTCCCGTTTGATCAT
GCACATGTTGTAA
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