CX675416
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX675416 vs. ExPASy Swiss-Prot
Match: ARFS_ORYSJ (Auxin response factor 19 OS=Oryza sativa subsp. japonica GN=ARF19 PE=2 SV=2) HSP 1 Score: 221.476 bits (563), Expect = 2.362e-57 Identity = 104/190 (54.74%), Postives = 137/190 (72.11%), Query Frame = 3 Query: 3 VTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMES 572 +TL P ++ + A++ R FCKTLTASDTSTHGGFSV RR A++ PPLD S QPP QEL A+DLH N W FRHI+RGQP+RHLL +GWS+FVS KRL AGD+ IF+R E +L +G+RRA RQ N+ SSV+SS SMH+G+LA A HA + + FT++Y PR SP+EF++P+ +Y ++ Sbjct: 124 MTLQPVTSYGKEALQLSELALKQARPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIGILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKA 313
BLAST of CX675416 vs. ExPASy Swiss-Prot
Match: ARFE_ORYSJ (Auxin response factor 5 OS=Oryza sativa subsp. japonica GN=ARF5 PE=2 SV=2) HSP 1 Score: 218.009 bits (554), Expect = 2.612e-56 Identity = 103/190 (54.21%), Postives = 136/190 (71.58%), Query Frame = 3 Query: 3 VTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMES 572 +TL P + + A++ R + FCKTLTASDTSTHGGFSV RR A++ PPLD S QPP QEL A+D+H N W FRHI+RGQP+RHLL +GWS+FVS KRL AGD+ I +R E +L +G+RRA RQ N+ SSV+SS SMH+GVLA A HA + + FT++Y PR SP+EF++P+ +Y ++ Sbjct: 118 MTLQPVNTYGKEALQISELALKQARPQMEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIVVRDEKHQLLLGIRRANRQPTNISSSVLSSDSMHIGVLAAAAHAAANSSPFTIFYNPRASPTEFVIPFAKYQKA 307
BLAST of CX675416 vs. ExPASy Swiss-Prot
Match: ARFP_ORYSJ (Auxin response factor 16 OS=Oryza sativa subsp. japonica GN=ARF16 PE=2 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 4.455e-56 Identity = 103/187 (55.08%), Postives = 134/187 (71.66%), Query Frame = 3 Query: 3 VTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQY 563 +TL P + D +A+ + FCKTLTASDTSTHGGFSV RR A++ PPLD + QPP QEL AKDLH W+FRHI+RGQP+RHLL +GWSVFVS+KRL+AGD+ +F+R E +L +G+RRA R Q + SSV+SS SMH+G+LA A HA + + FT++Y PR SPSEF++P +Y Sbjct: 97 MTLQPVNKYDRDAMLASELGLKQNKQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGILAAAAHAAANSSPFTIFYNPRASPSEFVIPLAKY 283
BLAST of CX675416 vs. ExPASy Swiss-Prot
Match: ARFP_ORYSI (Auxin response factor 16 OS=Oryza sativa subsp. indica GN=ARF16 PE=2 SV=1) HSP 1 Score: 217.238 bits (552), Expect = 4.455e-56 Identity = 103/187 (55.08%), Postives = 134/187 (71.66%), Query Frame = 3 Query: 3 VTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQY 563 +TL P + D +A+ + FCKTLTASDTSTHGGFSV RR A++ PPLD + QPP QEL AKDLH W+FRHI+RGQP+RHLL +GWSVFVS+KRL+AGD+ +F+R E +L +G+RRA R Q + SSV+SS SMH+G+LA A HA + + FT++Y PR SPSEF++P +Y Sbjct: 97 MTLQPVNKYDRDAMLASELGLKQNKQPAEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGILAAAAHAAANSSPFTIFYNPRASPSEFVIPLAKY 283
BLAST of CX675416 vs. ExPASy Swiss-Prot
Match: ARFS_ARATH (Auxin response factor 19 OS=Arabidopsis thaliana GN=ARF19 PE=1 SV=2) HSP 1 Score: 216.468 bits (550), Expect = 7.599e-56 Identity = 105/187 (56.15%), Postives = 131/187 (70.05%), Query Frame = 3 Query: 3 VTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQY 563 +TL P + D A+ R FCKTLTASDTSTHGGFSV RR A++ PPLD S QPP QE+ AKDLH W FRHI+RGQP+RHLL +GWSVFVS+KRL AGD+ +F+R E +L +G+RRA RQ + SSVISS SMH+G+LA A HA + + FT+++ PR SPSEF+VP +Y Sbjct: 96 MTLQPVNKYDREALLASDMGLKLNRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVISSDSMHIGILAAAAHANANSSPFTIFFNPRASPSEFVVPLAKY 282
BLAST of CX675416 vs. ExPASy Swiss-Prot
Match: ARFO_ORYSJ (Auxin response factor 15 OS=Oryza sativa subsp. japonica GN=ARF15 PE=2 SV=1) HSP 1 Score: 216.083 bits (549), Expect = 9.925e-56 Identity = 101/162 (62.35%), Postives = 126/162 (77.78%), Query Frame = 3 Query: 87 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMES 572 H FCKTLTASDTSTHGGFSV RR A++C PPLD S+Q P+QEL AKDLH EWRFRHI+RGQPRRHLL +GWS FV+ K+LV+GDA +FLRG++GELR+GVRRA + + + + +LG LA HAV+T ++F +YY PR S SEFIVPY ++M+S Sbjct: 140 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHSTEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSNLGTLANVAHAVATESVFNIYYNPRLSQSEFIVPYWKFMKS 301
BLAST of CX675416 vs. ExPASy Swiss-Prot
Match: ARFE_ARATH (Auxin response factor 5 OS=Arabidopsis thaliana GN=ARF5 PE=1 SV=3) HSP 1 Score: 214.542 bits (545), Expect = 2.888e-55 Identity = 100/160 (62.50%), Postives = 124/160 (77.50%), Query Frame = 3 Query: 93 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMES 572 FCKTLTASDTSTHGGFSV RR A++ PPLD S QPPTQEL +DLH N W FRHI+RGQP+RHLL +GWS+FV SKRL AGD+ +F+R E +L VGVRRA RQQ +PSSV+S+ SMH+GVLA A HA + T F ++Y PR P+EF++P +Y ++ Sbjct: 158 FCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKA 317
BLAST of CX675416 vs. ExPASy Swiss-Prot
Match: ARFH_ARATH (Auxin response factor 8 OS=Arabidopsis thaliana GN=ARF8 PE=2 SV=2) HSP 1 Score: 213.772 bits (543), Expect = 4.926e-55 Identity = 101/160 (63.12%), Postives = 127/160 (79.38%), Query Frame = 3 Query: 93 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMES 572 FCKTLTASDTSTHGGFSV RR A++ PPLD + QPP QEL A+DLH EW+FRHIFRGQP+RHLL +GWSVFVS+KRLVAGD+ IF+R E +L +G+R A R Q VPSSV+SS SMH+G+LA A HA +T + FTV++ PR S SEF++ +Y+++ Sbjct: 126 FCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKA 285
BLAST of CX675416 vs. ExPASy Swiss-Prot
Match: ARFN_ARATH (Putative auxin response factor 14 OS=Arabidopsis thaliana GN=ARF14 PE=3 SV=2) HSP 1 Score: 213.386 bits (542), Expect = 6.433e-55 Identity = 105/189 (55.56%), Postives = 137/189 (72.49%), Query Frame = 3 Query: 3 VTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYME 569 +TL+P++ Q + + R V+SF K LTASDTS HGGFSV ++HA ECLPPLDMS+ PTQE+ A DLHGN+WRFRHI+RG +RHLL GW+ F +SK+LV GD +F+RGE GELRVG+RRA QQGN+PSS++S SM G++A+A HA MF V YKPR+ S+FIV YD++++ Sbjct: 100 ITLMPDTTQVVIPTQNQNQF----RPLVNSFTKVLTASDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQRHLLTIGWNAFTTSKKLVEGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIVSIESMRHGIIASAKHAFDNQCMFIVVYKPRS--SQFIVSYDKFLD 282
BLAST of CX675416 vs. ExPASy Swiss-Prot
Match: ARFG_ARATH (Auxin response factor 7 OS=Arabidopsis thaliana GN=ARF7 PE=1 SV=2) HSP 1 Score: 213.386 bits (542), Expect = 6.433e-55 Identity = 105/190 (55.26%), Postives = 134/190 (70.53%), Query Frame = 3 Query: 3 VTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMES 572 +TL P + D +A+ R FCKTLTASDTSTHGGFSV RR A++ P LD S QPP QEL AKD+H N W FRHI+RGQP+RHLL +GWSVFVS+KRL AGD+ +F+R +L +G+RRA RQQ + SSVISS SMH+GVLA A HA + + FT++Y PR +P+EF+VP +Y ++ Sbjct: 97 MTLQPVNKYDRDALLASDMGLKLNRQPNEFFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKA 286 The following BLAST results are available for this feature:
BLAST of CX675416 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675416 ID=CX675416; Name=CX675416; organism=Citrus sinensis; type=EST; length=574bpback to top |