CX675416
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX675416 vs. ExPASy Swiss-Prot
Match: ARFU_ORYSJ (Auxin response factor 21 OS=Oryza sativa subsp. japonica GN=ARF21 PE=2 SV=2) HSP 1 Score: 212.231 bits (539), Expect = 1.433e-54 Identity = 104/193 (53.89%), Postives = 133/193 (68.91%), Query Frame = 3 Query: 3 VTLLPESNQ---DENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMES 572 +TL P SN D+ + R FCKTLTASDTSTHGGFSV RR A+ P LD S QPP QEL A+DLH N W FRHI+RGQP+RHLL +GWS+FVS KRL+AGD+ +F+R +L +G+RRA RQ N+ SSV+SS SMH+G+LA A HA + + FT+YY PR S SEF++P+ +Y ++ Sbjct: 99 MTLQPVSNVTQCDKETLLASELALKQTRPQTEFFCKTLTASDTSTHGGFSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSQFTIYYNPRASTSEFVIPFAKYQKA 291
BLAST of CX675416 vs. ExPASy Swiss-Prot
Match: ARFK_ORYSJ (Auxin response factor 11 OS=Oryza sativa subsp. japonica GN=ARF11 PE=2 SV=1) HSP 1 Score: 211.846 bits (538), Expect = 1.872e-54 Identity = 99/157 (63.06%), Postives = 122/157 (77.71%), Query Frame = 3 Query: 93 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQY 563 FCK LTASDTSTHGGFSV RR A++ P LD S QPP QEL +DLH N W FRHI+RGQP+RHLL +GWS+FV +KRL AGD+ +F+R E +L +GVRRA RQQ + SSV+S+ SMH+GVLA A HA S+G+ FT+YY PRTSPS F++P +Y Sbjct: 143 FCKNLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLLGVRRATRQQTMLSSSVLSTDSMHIGVLAAAAHAASSGSSFTIYYNPRTSPSPFVIPVARY 299
BLAST of CX675416 vs. ExPASy Swiss-Prot
Match: ARFK_ORYSI (Auxin response factor 11 OS=Oryza sativa subsp. indica GN=ARF11 PE=2 SV=2) HSP 1 Score: 211.846 bits (538), Expect = 1.872e-54 Identity = 99/157 (63.06%), Postives = 122/157 (77.71%), Query Frame = 3 Query: 93 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQY 563 FCK LTASDTSTHGGFSV RR A++ P LD S QPP QEL +DLH N W FRHI+RGQP+RHLL +GWS+FV +KRL AGD+ +F+R E +L +GVRRA RQQ + SSV+S+ SMH+GVLA A HA S+G+ FT+YY PRTSPS F++P +Y Sbjct: 143 FCKNLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLLGVRRATRQQTMLSSSVLSTDSMHIGVLAAAAHAASSGSSFTIYYNPRTSPSPFVIPVARY 299
BLAST of CX675416 vs. ExPASy Swiss-Prot
Match: ARFD_ARATH (Auxin response factor 4 OS=Arabidopsis thaliana GN=ARF4 PE=2 SV=1) HSP 1 Score: 210.69 bits (535), Expect = 4.170e-54 Identity = 98/162 (60.49%), Postives = 126/162 (77.78%), Query Frame = 3 Query: 87 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMES 572 H FCKTLTASDTSTHGGFSV RR A++C PLD +Q P+QEL AKDLHG EW+FRHI+RGQPRRHLL +GWS+FVS K LV+GDA +FLR E GELR+G+RRA R + +P S+I +S +L+ +AVST +MF V+Y PR + +EF++PY++Y+ S Sbjct: 175 HMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAARPRNGLPDSIIEKNSCS-NILSLVANAVSTKSMFHVFYSPRATHAEFVIPYEKYITS 335
BLAST of CX675416 vs. ExPASy Swiss-Prot
Match: ARFL_ARATH (Auxin response factor 12 OS=Arabidopsis thaliana GN=ARF12 PE=2 SV=2) HSP 1 Score: 210.305 bits (534), Expect = 5.446e-54 Identity = 105/190 (55.26%), Postives = 136/190 (71.58%), Query Frame = 3 Query: 3 VTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMES 572 +TL+P++ Q + E R V+SF K LTASDTS HGGF V ++HA ECLP LDMS+ P QEL A DLHGN+WRF H +RG P+RHLL +GW+ F +SK+LVAGD +F+RGE GELRVG+RRA QQGN+PSS++S M GV+A+A HA MFTV YKPR+ S+FIV YD+++++ Sbjct: 100 ITLMPDTTQVVIPTQNENQF----RPLVNSFTKVLTASDTSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQRHLLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVVASAKHAFDNQCMFTVVYKPRS--SKFIVSYDKFLDA 283
BLAST of CX675416 vs. ExPASy Swiss-Prot
Match: ARFV_ARATH (Auxin response factor 22 OS=Arabidopsis thaliana GN=ARF22 PE=2 SV=2) HSP 1 Score: 208.379 bits (529), Expect = 2.070e-53 Identity = 107/190 (56.32%), Postives = 137/190 (72.11%), Query Frame = 3 Query: 3 VTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMES 572 +TL+P++ Q + E R V+SF K LTASDTS GGF V ++HA ECLPPLDMS+ PTQEL A DLHGN+WRF H +RG P+RHLL +GW+ F +SK+LVAGD +F+RGE GELRVG+RRA QQGN+PSS+IS SM GV+A+A HA MF V YKPR+ S+FIV YD+++++ Sbjct: 100 ITLMPDTTQVVIPTQNENQF----RPLVNSFTKVLTASDTS--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQRHLLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMRHGVIASAKHAFDNQCMFIVVYKPRS--SQFIVSYDKFLDA 281
BLAST of CX675416 vs. ExPASy Swiss-Prot
Match: ARFB_ORYSJ (Auxin response factor 2 OS=Oryza sativa subsp. japonica GN=ARF2 PE=2 SV=1) HSP 1 Score: 207.994 bits (528), Expect = 2.703e-53 Identity = 98/162 (60.49%), Postives = 122/162 (75.31%), Query Frame = 3 Query: 87 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMES 572 H FCKTLTASDTSTHGGFSV RR A++C PPLD S Q P QEL AKDLHG EWRFRHI+RGQPRRHLL +GWS F++ K+LV+GDA +FLRGE+GELR+GVRRA + + P + + + L+ HAV+ ++F +YY PR S SEFI+PY ++M S Sbjct: 145 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSLQRPFQELVAKDLHGTEWRFRHIYRGQPRRHLLTTGWSGFINKKKLVSGDAVLFLRGEDGELRLGVRRAAQLKNASPFPALHNQISNTSSLSEVAHAVAVKSIFHIYYNPRLSQSEFIIPYWKFMRS 306
BLAST of CX675416 vs. ExPASy Swiss-Prot
Match: ARFU_ARATH (Putative auxin response factor 21 OS=Arabidopsis thaliana GN=ARF21 PE=2 SV=2) HSP 1 Score: 204.912 bits (520), Expect = 2.288e-52 Identity = 101/190 (53.16%), Postives = 136/190 (71.58%), Query Frame = 3 Query: 3 VTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMES 572 +TL+P++ Q + E R V+SF K LTASDTS +GGFSV ++HA ECLPPLDMS+ P QE+ A DLH N+WRFRH +RG P+RH L +GW+ F++SK+LV GD +F+RGE GELRVG+RRA QQGN+PSS++S M GV+A+A HA +F V YKPR+ S+FIV YD+++++ Sbjct: 100 ITLMPDTTQVVIPTQSENRF----RPLVNSFTKVLTASDTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHSLTTGWNEFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAFDNQCIFIVVYKPRS--SQFIVSYDKFLDA 283
BLAST of CX675416 vs. ExPASy Swiss-Prot
Match: ARFO_ARATH (Putative auxin response factor 15 OS=Arabidopsis thaliana GN=ARF15 PE=3 SV=2) HSP 1 Score: 202.986 bits (515), Expect = 8.695e-52 Identity = 102/190 (53.68%), Postives = 134/190 (70.53%), Query Frame = 3 Query: 3 VTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMES 572 +TL+P++ Q + E R V+SF K LTASD S +G FSV ++HA ECLPPLDMS+ P QEL A DLHGN+W FRH +RG P+RHLL +GW+ F +SK+LV GD +F+RGE GELRVG+RRA QQGN+PSS++S M GV+A+A HA MF V YKPR+ S+FIV YD+++++ Sbjct: 100 ITLMPDTTQVVIPTQNENQF----RPLVNSFTKVLTASDISANGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQRHLLTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHAFDNQCMFIVVYKPRS--SQFIVSYDKFLDA 283
BLAST of CX675416 vs. ExPASy Swiss-Prot
Match: ARFT_ARATH (Auxin response factor 20 OS=Arabidopsis thaliana GN=ARF20 PE=2 SV=3) HSP 1 Score: 200.29 bits (508), Expect = 5.636e-51 Identity = 99/190 (52.11%), Postives = 132/190 (69.47%), Query Frame = 3 Query: 3 VTLLPESNQDENAVEKEXXXXXXXRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMES 572 +TL+P++ Q + E R V+SF K LTASDTS +GGF V ++HA ECLPPL + P QEL AKDLHGN+WRFRH +RG P+RH L +GW+ F +SK+LV GD +F+RGE GELRVG+RRA QQGN+PSS++S M GV+A+A HA+ +F V YKP S+FIV YD+++++ Sbjct: 100 ITLMPDTTQVVIPTQSENQF----RPLVNSFTKVLTASDTSAYGGFFVPKKHAIECLPPLPL----PAQELLAKDLHGNQWRFRHSYRGTPQRHSLTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIASAKHALDNQCIFIVVYKPSIRSSQFIVSYDKFLDA 281 The following BLAST results are available for this feature:
BLAST of CX675416 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 56
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX675416 ID=CX675416; Name=CX675416; organism=Citrus sinensis; type=EST; length=574bpback to top |