CX675415
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX675415 vs. ExPASy Swiss-Prot
Match: ARFD_ARATH (Auxin response factor 4 OS=Arabidopsis thaliana GN=ARF4 PE=2 SV=1) HSP 1 Score: 81.2629 bits (199), Expect = 6.567e-15 Identity = 41/89 (46.07%), Postives = 55/89 (61.80%), Query Frame = -3 Query: 496 LIAELDQLFEFDGELMAHKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVLKMNSVSLSSKGEDSPMNGEGIDAKEVKQP 762 L+ EL++LF +G L +K W I+YTD E DMM+VGDDPW +FC +V KI +YTKEEV N + S E + + E + V QP Sbjct: 692 LLMELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCNVVWKIHLYTKEEVENANDDNKSCL-EQAALMMEASKSSSVSQP 779
BLAST of CX675415 vs. ExPASy Swiss-Prot
Match: ARFI_ORYSJ (Auxin response factor 9 OS=Oryza sativa subsp. japonica GN=ARF9 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.463e-14 Identity = 33/58 (56.90%), Postives = 45/58 (77.59%), Query Frame = -3 Query: 589 LIAELDQLFEFDGELMAHKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEE 762 L ++L+++F+ G+L K W +VYTDDE DMMLVGDDPW EFC MV++I+IY+ EE Sbjct: 574 LRSKLEEMFDIQGDLCPTLKRWQVVYTDDEDDMMLVGDDPWDEFCSMVKRIYIYSYEE 631
BLAST of CX675415 vs. ExPASy Swiss-Prot
Match: ARFN_ARATH (Putative auxin response factor 14 OS=Arabidopsis thaliana GN=ARF14 PE=3 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 3.259e-14 Identity = 40/70 (57.14%), Postives = 52/70 (74.29%), Query Frame = -3 Query: 556 LIAELDQLFEFDGELMAHKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVLKMNS-VSLSS 762 LI EL++LF+ G+L A + W I +T++E D MLVG+DPW EFC MV+KIFIY+KEEV + S SLSS Sbjct: 537 LILELEKLFDLKGQLQA-RNQWEIAFTNNEEDKMLVGEDPWPEFCNMVKKIFIYSKEEVKNLKSRKSLSS 605
BLAST of CX675415 vs. ExPASy Swiss-Prot
Match: ARFU_ARATH (Putative auxin response factor 21 OS=Arabidopsis thaliana GN=ARF21 PE=2 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 2.112e-13 Identity = 39/70 (55.71%), Postives = 50/70 (71.43%), Query Frame = -3 Query: 556 LIAELDQLFEFDGELMAHKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVLKM-NSVSLSS 762 LI EL++LF+ G+L + W I +TD +G MLVGDDPW EFC MV+KI IY+KEEV + +S SLSS Sbjct: 538 LILELEKLFDIKGQLQT-RNQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVKNLKSSKSLSS 606
BLAST of CX675415 vs. ExPASy Swiss-Prot
Match: ARFT_ARATH (Auxin response factor 20 OS=Arabidopsis thaliana GN=ARF20 PE=2 SV=3) HSP 1 Score: 76.2554 bits (186), Expect = 2.112e-13 Identity = 39/70 (55.71%), Postives = 50/70 (71.43%), Query Frame = -3 Query: 556 LIAELDQLFEFDGELMAHKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVLKM-NSVSLSS 762 LI EL++LF+ G+L + W I +TD +G MLVGDDPW EFC MV+KI IY+KEEV + +S SLSS Sbjct: 522 LILELEKLFDLKGQLQT-RNQWKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVKNLKSSKSLSS 590
BLAST of CX675415 vs. ExPASy Swiss-Prot
Match: ARFM_ARATH (Auxin response factor 13 OS=Arabidopsis thaliana GN=ARF13 PE=2 SV=3) HSP 1 Score: 71.2478 bits (173), Expect = 6.796e-12 Identity = 33/62 (53.23%), Postives = 45/62 (72.58%), Query Frame = -3 Query: 577 LIAELDQLFEFDGELMAHKKNWLIVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVLKM 762 LI +L++LF+ EL + W IV+T++EG MLVGDDPW EFC M ++IFI +KEE+ KM Sbjct: 535 LIQKLEELFDLKDELRT-RNQWEIVFTNNEGAEMLVGDDPWPEFCNMAKRIFICSKEEIKKM 595 The following BLAST results are available for this feature:
BLAST of CX675415 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX675415 ID=CX675415; Name=CX675415; organism=Citrus sinensis; type=EST; length=764bpback to top |