CX675409
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675409 vs. ExPASy Swiss-Prot
Match: YD22B_YEAST (Transposon Ty2-DR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY2B-DR2 PE=3 SV=2) HSP 1 Score: 69.707 bits (169), Expect = 1.808e-11 Identity = 61/232 (26.29%), Postives = 96/232 (41.38%), Query Frame = 1 Query: 4 IHTDVCGPFKLNSLGKNNYFLLFIDDFLRKTWVYFLKQKSEVXXXXXXXXXXXXXXSGYPIKAT--RSNRGGEFTSKEFLEFCEANGIRRPLTVLRSPQQNGVVERKNRTIRNMARSMLKSKRLPKEFWAEAVACAVYL--SYRSPSRSV*GKMPQEAWSGRKLGITHLRVFGS--IAHVHVPDESRSKLDDKSEKFIFIGYDNNSKGYKLYNSDNRRIVISRDVVFNEEGE 681 +HTD+ GP +YF+ F D+ R WVY L + E + + + + +RG E+T+K +F GI T + +GV ER NRT+ N R++L LP W AV + + S SP K ++ L IT + FG I + H PD SK+ + + NS GY +Y ++ V + + V + + Sbjct: 664 LHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSLVSPKND---KSARQHAGLAGLDITTILPFGQPVIVNNHNPD---SKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQNNQ 889
BLAST of CX675409 vs. ExPASy Swiss-Prot
Match: YO21B_YEAST (Transposon Ty2-OR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY2B-OR1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.361e-11 Identity = 61/226 (26.99%), Postives = 94/226 (41.59%), Query Frame = 1 Query: 4 IHTDVCGPFKLNSLGKNNYFLLFIDDFLRKTWVYFLKQKSEVXXXXXXXXXXXXXXSGYPIKAT--RSNRGGEFTSKEFLEFCEANGIRRPLTVLRSPQQNGVVERKNRTIRNMARSMLKSKRLPKEFWAEAVACAVYL--SYRSPSRSV*GKMPQEAWSGRKLGITHLRVFGS--IAHVHVPDESRSKLDDKSEKFIFIGYDNNSKGYKLYNSDNRRIVISRDVV 663 +HTD+ GP +YF+ F D+ R WVY L + E + + + + +RG E+T+K +F GI T + +GV ER NRT+ N R++L LP W AV + + S SP K ++ L IT + FG I + H PD SK+ + + NS GY +Y ++ V + + V Sbjct: 664 LHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSLVSPKND---KSARQHAGLAGLDITTILPFGQPVIVNNHNPD---SKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYV 883
BLAST of CX675409 vs. ExPASy Swiss-Prot
Match: YL22B_YEAST (Transposon Ty2-LR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY2B-LR2 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.361e-11 Identity = 61/226 (26.99%), Postives = 94/226 (41.59%), Query Frame = 1 Query: 4 IHTDVCGPFKLNSLGKNNYFLLFIDDFLRKTWVYFLKQKSEVXXXXXXXXXXXXXXSGYPIKAT--RSNRGGEFTSKEFLEFCEANGIRRPLTVLRSPQQNGVVERKNRTIRNMARSMLKSKRLPKEFWAEAVACAVYL--SYRSPSRSV*GKMPQEAWSGRKLGITHLRVFGS--IAHVHVPDESRSKLDDKSEKFIFIGYDNNSKGYKLYNSDNRRIVISRDVV 663 +HTD+ GP +YF+ F D+ R WVY L + E + + + + +RG E+T+K +F GI T + +GV ER NRT+ N R++L LP W AV + + S SP K ++ L IT + FG I + H PD SK+ + + NS GY +Y ++ V + + V Sbjct: 664 LHTDIFGPVHHLPKSAPSYFISFTDEKTRFQWVYPLHDRREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTADSRAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFSTIIRNSLVSPKND---KSARQHAGLAGLDITTILPFGQPVIVNNHNPD---SKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYV 883
BLAST of CX675409 vs. ExPASy Swiss-Prot
Match: YA11B_YEAST (Transposon Ty1-A Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY1B-A PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.027e-11 Identity = 63/244 (25.82%), Postives = 103/244 (42.21%), Query Frame = 1 Query: 4 IHTDVCGPFKLNSLGKNNYFLLFIDDFLRKTWVYFLKQKSEVXXXXXXXXXXXXXXSGYP--IKATRSNRGGEFTSKEFLEFCEANGIRRPLTVLRSPQQNGVVERKNRTIRNMARSMLKSKRLPKEFWAEAV--ACAVYLSYRSPSRSV*GKMPQEAWSGRKLGITHLRVFGS--IAHVHVPDESRSKLDDKSEKFIFIGYDNNSKGYKLYNSDNRRIVISRDVVFNEEGEWDFGSGMDDFYF 717 +HTD+ GP +YF+ F D+ + WVY L + E + + + + +RG E+T++ +F E NGI T + +GV ER NRT+ + R+ L+ LP W A+ + V S SP K ++ L I+ L FG I + H P+ SK+ + + NS GY +Y ++ V + + V + E S +D F + Sbjct: 668 LHTDIFGPVHNLPKSAPSYFISFTDETTKLRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSK---KSARQHAGLAGLDISTLLPFGQPVIVNDHNPN---SKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKE----SRLDQFNY 901
BLAST of CX675409 vs. ExPASy Swiss-Prot
Match: YP12B_YEAST (Transposon Ty1-PR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY1B-PR1 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.260e-11 Identity = 63/244 (25.82%), Postives = 103/244 (42.21%), Query Frame = 1 Query: 4 IHTDVCGPFKLNSLGKNNYFLLFIDDFLRKTWVYFLKQKSEVXXXXXXXXXXXXXXSGYP--IKATRSNRGGEFTSKEFLEFCEANGIRRPLTVLRSPQQNGVVERKNRTIRNMARSMLKSKRLPKEFWAEAV--ACAVYLSYRSPSRSV*GKMPQEAWSGRKLGITHLRVFGS--IAHVHVPDESRSKLDDKSEKFIFIGYDNNSKGYKLYNSDNRRIVISRDVVFNEEGEWDFGSGMDDFYF 717 +HTD+ GP +YF+ F D+ + WVY L + E + + + + +RG E+T++ +F E NGI T + +GV ER NRT+ + R+ L+ LP W A+ + V S SP K ++ L I+ L FG I + H P+ SK+ + + NS GY +Y ++ V + + V + E S +D F + Sbjct: 668 LHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSK---KSARQHAGLAGLDISTLLPFGQPVIVNDHNPN---SKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKE----SRLDQFNY 901
BLAST of CX675409 vs. ExPASy Swiss-Prot
Match: YO12B_YEAST (Transposon Ty1-OR Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY1B-OR PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.260e-11 Identity = 63/244 (25.82%), Postives = 103/244 (42.21%), Query Frame = 1 Query: 4 IHTDVCGPFKLNSLGKNNYFLLFIDDFLRKTWVYFLKQKSEVXXXXXXXXXXXXXXSGYP--IKATRSNRGGEFTSKEFLEFCEANGIRRPLTVLRSPQQNGVVERKNRTIRNMARSMLKSKRLPKEFWAEAV--ACAVYLSYRSPSRSV*GKMPQEAWSGRKLGITHLRVFGS--IAHVHVPDESRSKLDDKSEKFIFIGYDNNSKGYKLYNSDNRRIVISRDVVFNEEGEWDFGSGMDDFYF 717 +HTD+ GP +YF+ F D+ + WVY L + E + + + + +RG E+T++ +F E NGI T + +GV ER NRT+ + R+ L+ LP W A+ + V S SP K ++ L I+ L FG I + H P+ SK+ + + NS GY +Y ++ V + + V + E S +D F + Sbjct: 668 LHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSK---KSARQHAGLAGLDISTLLPFGQPVIVNDHNPN---SKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKE----SRLDQFNY 901
BLAST of CX675409 vs. ExPASy Swiss-Prot
Match: YO11B_YEAST (Transposon Ty1-OL Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY1B-OL PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.260e-11 Identity = 63/244 (25.82%), Postives = 103/244 (42.21%), Query Frame = 1 Query: 4 IHTDVCGPFKLNSLGKNNYFLLFIDDFLRKTWVYFLKQKSEVXXXXXXXXXXXXXXSGYP--IKATRSNRGGEFTSKEFLEFCEANGIRRPLTVLRSPQQNGVVERKNRTIRNMARSMLKSKRLPKEFWAEAV--ACAVYLSYRSPSRSV*GKMPQEAWSGRKLGITHLRVFGS--IAHVHVPDESRSKLDDKSEKFIFIGYDNNSKGYKLYNSDNRRIVISRDVVFNEEGEWDFGSGMDDFYF 717 +HTD+ GP +YF+ F D+ + WVY L + E + + + + +RG E+T++ +F E NGI T + +GV ER NRT+ + R+ L+ LP W A+ + V S SP K ++ L I+ L FG I + H P+ SK+ + + NS GY +Y ++ V + + V + E S +D F + Sbjct: 668 LHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSK---KSARQHAGLAGLDISTLLPFGQPVIVNDHNPN---SKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKE----SRLDQFNY 901
BLAST of CX675409 vs. ExPASy Swiss-Prot
Match: YN12B_YEAST (Transposon Ty1-NL2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY1B-NL2 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.260e-11 Identity = 63/244 (25.82%), Postives = 103/244 (42.21%), Query Frame = 1 Query: 4 IHTDVCGPFKLNSLGKNNYFLLFIDDFLRKTWVYFLKQKSEVXXXXXXXXXXXXXXSGYP--IKATRSNRGGEFTSKEFLEFCEANGIRRPLTVLRSPQQNGVVERKNRTIRNMARSMLKSKRLPKEFWAEAV--ACAVYLSYRSPSRSV*GKMPQEAWSGRKLGITHLRVFGS--IAHVHVPDESRSKLDDKSEKFIFIGYDNNSKGYKLYNSDNRRIVISRDVVFNEEGEWDFGSGMDDFYF 717 +HTD+ GP +YF+ F D+ + WVY L + E + + + + +RG E+T++ +F E NGI T + +GV ER NRT+ + R+ L+ LP W A+ + V S SP K ++ L I+ L FG I + H P+ SK+ + + NS GY +Y ++ V + + V + E S +D F + Sbjct: 668 LHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSK---KSARQHAGLAGLDISTLLPFGQPVIVNDHNPN---SKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKE----SRLDQFNY 901
BLAST of CX675409 vs. ExPASy Swiss-Prot
Match: YN11B_YEAST (Transposon Ty1-NL1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY1B-NL1 PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.260e-11 Identity = 63/244 (25.82%), Postives = 103/244 (42.21%), Query Frame = 1 Query: 4 IHTDVCGPFKLNSLGKNNYFLLFIDDFLRKTWVYFLKQKSEVXXXXXXXXXXXXXXSGYP--IKATRSNRGGEFTSKEFLEFCEANGIRRPLTVLRSPQQNGVVERKNRTIRNMARSMLKSKRLPKEFWAEAV--ACAVYLSYRSPSRSV*GKMPQEAWSGRKLGITHLRVFGS--IAHVHVPDESRSKLDDKSEKFIFIGYDNNSKGYKLYNSDNRRIVISRDVVFNEEGEWDFGSGMDDFYF 717 +HTD+ GP +YF+ F D+ + WVY L + E + + + + +RG E+T++ +F E NGI T + +GV ER NRT+ + R+ L+ LP W A+ + V S SP K ++ L I+ L FG I + H P+ SK+ + + NS GY +Y ++ V + + V + E S +D F + Sbjct: 668 LHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSK---KSARQHAGLAGLDISTLLPFGQPVIVNDHNPN---SKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKE----SRLDQFNY 901
BLAST of CX675409 vs. ExPASy Swiss-Prot
Match: YM14B_YEAST (Transposon Ty1-MR2 Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY1B-MR2 PE=1 SV=2) HSP 1 Score: 68.1662 bits (165), Expect = 5.260e-11 Identity = 63/244 (25.82%), Postives = 103/244 (42.21%), Query Frame = 1 Query: 4 IHTDVCGPFKLNSLGKNNYFLLFIDDFLRKTWVYFLKQKSEVXXXXXXXXXXXXXXSGYP--IKATRSNRGGEFTSKEFLEFCEANGIRRPLTVLRSPQQNGVVERKNRTIRNMARSMLKSKRLPKEFWAEAV--ACAVYLSYRSPSRSV*GKMPQEAWSGRKLGITHLRVFGS--IAHVHVPDESRSKLDDKSEKFIFIGYDNNSKGYKLYNSDNRRIVISRDVVFNEEGEWDFGSGMDDFYF 717 +HTD+ GP +YF+ F D+ + WVY L + E + + + + +RG E+T++ +F E NGI T + +GV ER NRT+ + R+ L+ LP W A+ + V S SP K ++ L I+ L FG I + H P+ SK+ + + NS GY +Y ++ V + + V + E S +D F + Sbjct: 668 LHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSK---KSARQHAGLAGLDISTLLPFGQPVIVNDHNPN---SKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKE----SRLDQFNY 901 The following BLAST results are available for this feature:
BLAST of CX675409 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675409 ID=CX675409; Name=CX675409; organism=Citrus sinensis; type=EST; length=726bpback to top |