CX675409
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CX675409 vs. ExPASy Swiss-Prot
Match: YD11B_YEAST (Transposon Ty1-DR1 Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY1B-DR1 PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 6.869e-11 Identity = 63/244 (25.82%), Postives = 103/244 (42.21%), Query Frame = 1 Query: 4 IHTDVCGPFKLNSLGKNNYFLLFIDDFLRKTWVYFLKQKSEVXXXXXXXXXXXXXXSGYP--IKATRSNRGGEFTSKEFLEFCEANGIRRPLTVLRSPQQNGVVERKNRTIRNMARSMLKSKRLPKEFWAEAV--ACAVYLSYRSPSRSV*GKMPQEAWSGRKLGITHLRVFGS--IAHVHVPDESRSKLDDKSEKFIFIGYDNNSKGYKLYNSDNRRIVISRDVVFNEEGEWDFGSGMDDFYF 717 +HTD+ GP +YF+ F D+ + WVY L + E + + + + +RG E+T++ +F E NGI T + +GV ER NRT+ + R+ L+ LP W A+ + V S SP K ++ L I+ L FG I + H P+ SK+ + + NS GY +Y ++ V + + V + E S +D F + Sbjct: 668 LHTDIFGPVHNLPNSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSK---KSARQHAGLAGLDISTLLPFGQPVIVNDHNPN---SKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKE----SRLDQFNY 901
BLAST of CX675409 vs. ExPASy Swiss-Prot
Match: TY1AB_YEAST (Transposon TyH3 Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY1B PE=1 SV=2) HSP 1 Score: 67.781 bits (164), Expect = 6.869e-11 Identity = 63/244 (25.82%), Postives = 103/244 (42.21%), Query Frame = 1 Query: 4 IHTDVCGPFKLNSLGKNNYFLLFIDDFLRKTWVYFLKQKSEVXXXXXXXXXXXXXXSGYP--IKATRSNRGGEFTSKEFLEFCEANGIRRPLTVLRSPQQNGVVERKNRTIRNMARSMLKSKRLPKEFWAEAV--ACAVYLSYRSPSRSV*GKMPQEAWSGRKLGITHLRVFGS--IAHVHVPDESRSKLDDKSEKFIFIGYDNNSKGYKLYNSDNRRIVISRDVVFNEEGEWDFGSGMDDFYF 717 +HTD+ GP +YF+ F D+ + WVY L + E + + + + +RG E+T++ +F E NGI T + +GV ER NRT+ + R+ L+ LP W A+ + V S SP K ++ L I+ L FG I + H P+ SK+ + + NS GY +Y ++ V + + V + E S +D F + Sbjct: 668 LHTDIFGPVHNLPNSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSK---KSARQHAGLAGLDISTLLPFGQPVIVNDHNPN---SKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYVILQGKE----SRLDQFNY 901
BLAST of CX675409 vs. ExPASy Swiss-Prot
Match: YB12B_YEAST (Transposon Ty1-BR Gag-Pol polyprotein OS=Saccharomyces cerevisiae GN=TY1B-BR PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.972e-11 Identity = 59/226 (26.11%), Postives = 96/226 (42.48%), Query Frame = 1 Query: 4 IHTDVCGPFKLNSLGKNNYFLLFIDDFLRKTWVYFLKQKSEVXXXXXXXXXXXXXXSGYP--IKATRSNRGGEFTSKEFLEFCEANGIRRPLTVLRSPQQNGVVERKNRTIRNMARSMLKSKRLPKEFWAEAV--ACAVYLSYRSPSRSV*GKMPQEAWSGRKLGITHLRVFGS--IAHVHVPDESRSKLDDKSEKFIFIGYDNNSKGYKLYNSDNRRIVISRDVV 663 +HTD+ GP +YF+ F D+ + WVY L + E + + + + +RG E+T++ +F E NGI T + +GV ER NRT+ + R+ L+ LP W A+ + V S SP K ++ L I+ L FG I + H P+ SK+ + + NS GY +Y ++ V + + V Sbjct: 668 LHTDIFGPVHNLPKSAPSYFISFTDETTKFRWVYPLHDRREDSILDVFTTILAFIKNQFQASVLVIQMDRGSEYTNRTLHKFLEKNGITPCYTTTADSRAHGVAERLNRTLLDDCRTQLQCSGLPNHLWFSAIEFSTIVRNSLASPKSK---KSARQHAGLAGLDISTLLPFGQPVIVNDHNPN---SKIHPRGIPGYALHPSRNSYGYIIYLPSLKKTVDTTNYV 887 The following BLAST results are available for this feature:
BLAST of CX675409 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 43
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CX675409 ID=CX675409; Name=CX675409; organism=Citrus sinensis; type=EST; length=726bpback to top |