CK937979
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK937979 vs. ExPASy Swiss-Prot
Match: UBIQ_LEIMA (Ubiquitin OS=Leishmania major GN=UB-EP52 PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 3.838e-23 Identity = 52/55 (94.55%), Postives = 55/55 (100.00%), Query Frame = 2 Query: 5 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 169 TI+NVKAKIQDKEGIPPDQQRLIFAGKQLE+GRTL+DYNIQKESTLHLVLRLRGG Sbjct: 22 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CK937979 vs. ExPASy Swiss-Prot
Match: UBIQ_ENCCU (Ubiquitin OS=Encephalitozoon cuniculi GN=ECU02_0740i PE=1 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 3.838e-23 Identity = 52/55 (94.55%), Postives = 55/55 (100.00%), Query Frame = 2 Query: 5 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 169 +I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 22 SIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CK937979 vs. ExPASy Swiss-Prot
Match: UBIQ_AGLNE (Ubiquitin OS=Aglaothamnion neglectum PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 3.838e-23 Identity = 52/55 (94.55%), Postives = 54/55 (98.18%), Query Frame = 2 Query: 5 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 169 TI+NVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 22 TIENVKTKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CK937979 vs. ExPASy Swiss-Prot
Match: UBIQ_PHYIN (Ubiquitin OS=Phytophthora infestans PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 5.013e-23 Identity = 52/55 (94.55%), Postives = 54/55 (98.18%), Query Frame = 2 Query: 5 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 169 +IDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 22 SIDNVKQKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CK937979 vs. ExPASy Swiss-Prot
Match: UBIQ_DICDI (Ubiquitin OS=Dictyostelium discoideum GN=ubqA PE=1 SV=1) HSP 1 Score: 107.457 bits (267), Expect = 5.013e-23 Identity = 52/54 (96.30%), Postives = 54/54 (100.00%), Query Frame = 2 Query: 8 IDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 169 I+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLRGG Sbjct: 23 IENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CK937979 vs. ExPASy Swiss-Prot
Match: UBIQ_LEITA (Ubiquitin OS=Leishmania tarentolae GN=UB-EP52 PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.488e-22 Identity = 51/55 (92.73%), Postives = 54/55 (98.18%), Query Frame = 2 Query: 5 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGG 169 TI+NVKAKIQDKEGIPPDQQRLIFA KQLE+GRTL+DYNIQKESTLHLVLRLRGG Sbjct: 22 TIENVKAKIQDKEGIPPDQQRLIFADKQLEEGRTLSDYNIQKESTLHLVLRLRGG 76
BLAST of CK937979 vs. ExPASy Swiss-Prot
Match: UBIQ_LUMTE (Ubiquitin (Fragment) OS=Lumbricus terrestris PE=1 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 3.249e-22 Identity = 51/53 (96.23%), Postives = 53/53 (100.00%), Query Frame = 2 Query: 5 TIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLR 163 TI+NVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTL+DYNIQKESTLHLVLRLR Sbjct: 11 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR 63
BLAST of CK937979 vs. ExPASy Swiss-Prot
Match: RL40_CHLRE (60S ribosomal protein L40 OS=Chlamydomonas reinhardtii GN=UBI1 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 7.239e-22 Identity = 46/52 (88.46%), Postives = 49/52 (94.23%), Query Frame = 2 Query: 170 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 325 IIEPSL ALARKYNQ+KMICRKCYARLHPRA NCRKK CGH+NQLRPKKK+K Sbjct: 1 IIEPSLQALARKYNQEKMICRKCYARLHPRAKNCRKKSCGHTNQLRPKKKLK 52
BLAST of CK937979 vs. ExPASy Swiss-Prot
Match: RL40_SHEEP (60S ribosomal protein L40 OS=Ovis aries GN=UBA52 PE=3 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.692e-21 Identity = 45/52 (86.54%), Postives = 48/52 (92.31%), Query Frame = 2 Query: 170 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 325 IIEPSL LA+KYN DKMICRKCYARLHPRAVNCRKKKCGH+N LRPKKK+K Sbjct: 1 IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52
BLAST of CK937979 vs. ExPASy Swiss-Prot
Match: RL40_RAT (60S ribosomal protein L40 OS=Rattus norvegicus GN=Uba52 PE=1 SV=1) HSP 1 Score: 100.908 bits (250), Expect = 4.692e-21 Identity = 45/52 (86.54%), Postives = 48/52 (92.31%), Query Frame = 2 Query: 170 IIEPSLMALARKYNQDKMICRKCYARLHPRAVNCRKKKCGHSNQLRPKKKIK 325 IIEPSL LA+KYN DKMICRKCYARLHPRAVNCRKKKCGH+N LRPKKK+K Sbjct: 1 IIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNNLRPKKKVK 52 The following BLAST results are available for this feature:
BLAST of CK937979 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 123
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Sequences
The
following sequences are available for this feature:
EST sequence >CK937979 ID=CK937979; Name=CK937979; organism=Citrus sinensis; type=EST; length=577bpback to top |