CX675406
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA1_DROME (Proteasome subunit alpha type-1 OS=Drosophila melanogaster GN=Pros35 PE=1 SV=1) HSP 1 Score: 250.751 bits (639), Expect = 6.169e-66 Identity = 125/234 (53.42%), Postives = 166/234 (70.94%), Query Frame = 2 Query: 20 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETL----QGETLKSSICTVAVVGAGEPFHILDQETVQK 709 MFRNQYD+DVT WSP GRL QVEYAMEAVK G+A +GL++K + VL + K SELS Q+KI +DDH+G++IAGLTAD RVLSRY+RSEC+NY ++Y++ PV RL+ L +K Q TQR +RPYGVGLLVAG DE+G H+Y PS +F +A +IGSRSQ+A+TYLE+ F +S+++++I+ + AI TL QG+ TVA+VG +PF IL + K Sbjct: 1 MFRNQYDSDVTVWSPQGRLHQVEYAMEAVKLGTATVGLKNKDYAVLVALCKPTSELSDTQRKIIPIDDHLGISIAGLTADARVLSRYLRSECLNYKHSYDTTYPVSRLITNLGNKMQTTTQRYDRRPYGVGLLVAGYDERGPHIYQVTPSATFFNCKANSIGSRSQSARTYLEKNLNKFLDSSKDEIIRHGIRAILGTLPTDEQGKDAGQYDITVAIVGKDQPFTILSNKDSAK 234
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA1_SCHPO (Probable proteasome subunit alpha type-1 OS=Schizosaccharomyces pombe GN=SPAC6G10.04c PE=2 SV=1) HSP 1 Score: 243.817 bits (621), Expect = 7.541e-64 Identity = 124/247 (50.20%), Postives = 169/247 (68.42%), Query Frame = 2 Query: 20 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETL-QGETLKSSICTVAVVGAGEPFHILDQETVQKLIDSFDIAGTEEGPAA 757 MFRNQYD D TTWSP GRL QVEYA+EA+KQGSA +GL SKTH VL + + ELSS+QKK+ ++DDHIG+AIAGL D RVLS YM+ E ++ + P+PV RL+ ++A+KAQ+ TQ +RPYGVG LV G DE G HL PSG EY ++GSRSQ+A+TY+ER + F +S+RE+LI AL A+R+TL + + L +++V+G E + + DQ ++ +D ++GPAA Sbjct: 1 MFRNQYDGDATTWSPQGRLHQVEYALEAIKQGSATVGLVSKTHAVLVALKRNAEELSSYQKKLIRIDDHIGIAIAGLAPDARVLSNYMKQEALSSKTLFTRPIPVRRLMSKVAEKAQINTQEYGRRPYGVGFLVIGYDESGPHLLEFQPSGLVLEYLGTSMGSRSQSARTYIERNLDTFPDSSREELILSALRALRDTLSKDQELTEENVSISVIGKDEKYTLYDQNDTKEWLDKLG----DKGPAA 243
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA1_CHICK (Proteasome subunit alpha type-1 OS=Gallus gallus GN=PSMA1 PE=2 SV=2) HSP 1 Score: 243.047 bits (619), Expect = 1.286e-63 Identity = 119/238 (50.00%), Postives = 163/238 (68.49%), Query Frame = 2 Query: 41 TDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGE-TLKSSICTVAVVGAGEPFHILDQETVQKLIDSFDIAGTEEGP 751 +DVT WSP GR+ Q+EYAMEAVKQGSA +GL+SKTH VL + +A SEL++HQKKI VD+HIG++IAGLTAD R+L +MR EC++ + ++ PLPV RLV + K Q+ TQR +RPYGVGLL+AG D+ G H++ CPS NYF+ +A +IG+RSQ+A+ YLER F++ +L+K L A+RETL E L + ++ +VG F I D + V ++ G EE P Sbjct: 7 SDVTVWSPQGRIHQIEYAMEAVKQGSATVGLKSKTHAVLVALKRAQSELAAHQKKILYVDNHIGISIAGLTADARLLCNFMRQECLDSRFVFDRPLPVSRLVSLIGSKTQIPTQRYGRRPYGVGLLIAGYDDMGPHIFQTCPSANYFDCKAMSIGARSQSARNYLERHMTEFTDCNLNELVKHGLRALRETLPAEQDLTTKNVSIGIVGKDMEFTIYDDDDVAPFLE-----GLEERP 239
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA1_TRYCR (Proteasome subunit alpha type-1 OS=Trypanosoma cruzi PE=2 SV=1) HSP 1 Score: 241.506 bits (615), Expect = 3.742e-63 Identity = 121/247 (48.99%), Postives = 173/247 (70.04%), Query Frame = 2 Query: 20 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKAN-SELSSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAI-RETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLIDSFDIAGTEEGPA 754 MF+NQYDT+ TTWSP GRLFQVEYA EAV GSAA+G ++K VVL + ++ ++ SS+Q+K+FK+DDH+G+AIAGL ADGR+L+R++R+EC+NY Y ++S P+ + + +K Q Q + KRP+GVGLL+AG D G HLY+ PSG+ F+++A A+G RSQAA+TYLE+ FE+F + ++LI AL A+ T G L T+A+VG G PF +L +E +K +D F + + PA Sbjct: 1 MFKNQYDTNTTTWSPTGRLFQVEYANEAVNNGSAAVGAKNKDFVVLTALKRSPVAQFSSYQEKVFKLDDHVGMAIAGLVADGRMLARFVRTECMNYRYMHDSDNPLPLIAEIVGEKYQRHIQFAGKRPFGVGLLIAGYDSTGPHLYHTVPSGDVFDFKATAMGLRSQAARTYLEKHFESFPDCGLDELIMHALKALAAATSGGAELNIKNTTIAIVGKGTPFMVLTEEAARKYLDGFKMRPEDIPPA 247
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA1_CAEEL (Proteasome subunit alpha type-1 OS=Caenorhabditis elegans GN=pas-6 PE=2 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 2.270e-60 Identity = 110/229 (48.03%), Postives = 161/229 (70.31%), Query Frame = 2 Query: 20 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQG-ETLKSSICTVAVVGAGEPFHILDQETV 703 MFRNQYD DVT WSP GRL QVEYA+EA+KQGSA +G++S+TH V+ + +A ++LSSHQKK++++D H GV+IAGL +DGR+L+RY+++EC ++ + Y+ +P+ +L + K Q TQ +RP+GVG+L+AG D+ GAH+ PS +IG+RSQ+A+TYLER +NF +ST E LI AL+A+R+TL E L + ++ +VG PF +L+ V Sbjct: 1 MFRNQYDGDVTVWSPQGRLHQVEYAVEAMKQGSATVGIKSETHAVIVALKRAQNDLSSHQKKVYEIDTHAGVSIAGLLSDGRILARYLQTECSSWRWDYKQAVPIKKLAESMQLKLQANTQYYGRRPFGVGILIAGYDKDGAHIIQTDPSAEVVSMHGTSIGARSQSARTYLERNVDNFEKSTPEQLIVHALLALRDTLPAEENLNAQNTSIGIVGKDSPFSLLEDAQV 229
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA1_TRYBR (Proteasome subunit alpha type-1 OS=Trypanosoma brucei rhodesiense PE=2 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 3.873e-60 Identity = 120/237 (50.63%), Postives = 161/237 (67.93%), Query Frame = 2 Query: 20 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKAN-SELSSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAI-RETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLIDSF 724 MF+NQYDTD TTWSP GRLFQVEYA EAV GSAA+G++ +VVL + + S LSS+Q+K FK+D+H+G+AI+GL ADGR LSR++R+EC+NY Y ++S P+ L + K Q Q + KRP+GVGLL+AG D +G LY PSG+ F+++A A+G RSQAA+TYLER F F ++L+ AL A+ T G L T+A+VG G PF IL +E +K +D F Sbjct: 1 MFKNQYDTDTTTWSPTGRLFQVEYANEAVNNGSAAVGVKGADYVVLTALKRNPVSGLSSYQEKAFKLDEHVGMAISGLVADGRALSRFLRTECMNYRYMHDSDAPLVMLADIVGAKHQRHIQFAGKRPFGVGLLIAGYDRQGPRLYQTVPSGDVFDFKATAMGLRSQAARTYLERHFRGFPACDLDELVMHALRALGAATSGGVELNIKNTTIAIVGKGTPFTILTEEEARKYLDGF 237
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA1_YEAST (Proteasome component PRE5 OS=Saccharomyces cerevisiae GN=PRE5 PE=1 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 3.393e-56 Identity = 119/234 (50.85%), Postives = 149/234 (63.68%), Query Frame = 2 Query: 20 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENF--SESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLI 715 MFRN YD D T+SP GRLFQVEYA+EA+KQGS +GLRS TH VL + + ELSS+QKKI K D+H+G+++AGL D RVLS Y+R +C S + L V R L DKAQ TQ RPYGVGLL+ G D+ GAHL PSGN E AIG+RSQ AKTYLER + F + ++LIK + AI ++L+ E+L ++A+VG PF I D E V K I Sbjct: 1 MFRNNYDGDTVTFSPTGRLFQVEYALEAIKQGSVTVGLRSNTHAVLVALKRNADELSSYQKKIIKCDEHMGLSLAGLAPDARVLSNYLRQQCNYSSLVFNRKLAVERAGHLLCDKAQKNTQSYGGRPYGVGLLIIGYDKSGAHLLEFQPSGNVTELYGTAIGARSQGAKTYLERTLDTFIKIDGNPDELIKAGVEAISQSLRDESLTVDNLSIAIVGKDTPFTIYDGEAVAKYI 234
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA5_SCHPO (Probable proteasome subunit alpha type-5 OS=Schizosaccharomyces pombe GN=SPAC323.02c PE=1 SV=1) HSP 1 Score: 165.622 bits (418), Expect = 2.610e-40 Identity = 99/234 (42.31%), Postives = 140/234 (59.83%), Query Frame = 2 Query: 20 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL-SSHQ-KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA------QVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQE 697 M R++YD V T+SP GRLFQVEYA+EA+K GS AIG+++K VVLG + S L SH +K+F++D HIG AI+GLTAD R + + R + N+ +TY+ P + + D A + +R RP+GV LL+AG+DE G LY++ PSG YF Y+A AIGS S+ AK+ L + F + T E+ L +R+ ++ E L S +A V A FHI + E Sbjct: 3 MTRSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGVKTKDAVVLGVEKRLTSPLMESHSVEKLFEIDSHIGCAISGLTADARTIIEHARVQTQNHRFTYDEPQGIESTTQSICDLALRFGEGEDGEERIMSRPFGVALLIAGIDEHGPQLYHSEPSGTYFRYEAKAIGSGSEPAKSELVKEFH--KDMTLEEAEVLILKVLRQVME-EKLDSKNVQLAKVTAEGGFHIYNDE 233
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSMA_METKA (Proteasome subunit alpha OS=Methanopyrus kandleri GN=psmA PE=3 SV=1) HSP 1 Score: 154.836 bits (390), Expect = 4.607e-37 Identity = 93/239 (38.91%), Postives = 139/239 (58.16%), Query Frame = 2 Query: 35 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLIDSFDIAGTEE 745 YD +T +SP GRLFQVEYA EAVK+G+ A+G++ + VVLG + S+L + +K++++D HIG A AGL AD RVL R E Y YTY P+ V LV + D QV TQ RP+G LL+AG+D KG L+ PSG E++A AIG Q A E + + T ++ I+ A+ A+ E + ET ++ +AVV + F L+++ ++++ + + G+EE Sbjct: 10 YDRAITVFSPDGRLFQVEYAREAVKRGTTALGIKVEEGVVLGVDKRVTSKLIEPESIEKVYQIDTHIGAATAGLVADARVLVERARIEAQTYRYTYGEPIDVDVLVKAICDLKQVYTQHGGVRPFGTALLIAGVDTKGCRLFETDPSGALTEHKATAIGEGRQEALDVFEEEYR--EDMTLQEAIELAVRALYEASREETTADNL-EIAVVDK-QGFRKLERKKIEEMFER--VVGSEE 242
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA4_SPIOL (Proteasome subunit alpha type-4 OS=Spinacia oleracea GN=PAC1 PE=2 SV=1) HSP 1 Score: 154.066 bits (388), Expect = 7.858e-37 Identity = 87/214 (40.65%), Postives = 134/214 (62.62%), Query Frame = 2 Query: 32 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL---SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEK-GAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVV 661 +YD+ T +SP GRL+QVEYAMEA+ +AIG+ +K VVL K S+L S+ +K++K+DDH+ A+AG+ +D +L R + Y+++Y+ P+PV +LV L D Q TQ RP+GV L AG D+ G LY + PSGNY ++A AIG+ +QAA++ L++ +++ + TRED +K AL A+ +T+ +L S +A V Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSAIGILAKDGVVLIGEKKVTSKLLQTSTSTEKMYKIDDHVACAVAGIMSDANILINTARVQAQRYTFSYQEPMPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKNYGFQLYMSDPSGNYGGWKATAIGANNQAAQSMLKQDYKD--DVTREDAVKLALKALSKTMDSTSLTSEKLELAEV 215 The following BLAST results are available for this feature:
BLAST of CX675406 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675406 ID=CX675406; Name=CX675406; organism=Citrus sinensis; type=EST; length=759bpback to top |