CX675406
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA6_DROME (Proteasome subunit alpha type-6 OS=Drosophila melanogaster GN=Prosalpha1 PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 7.894e-21 Identity = 70/231 (30.30%), Postives = 121/231 (52.38%), Query Frame = 2 Query: 35 YDTDVTTWSPAGRLFQVEYAMEAVKQGS-AAIGLRSKTHVVLGCVNKANSE--LSSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLD-EKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFE-NFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEP-FHILDQETVQK 709 +D +T +SP GRL+QVEYA +A+ Q + + L+S V+ K + + +F++ IG A+ G AD R + R E N+ Y Y +PV L ++AD QV TQ + RP G +++ D E G +Y P+G + ++A ++G+++ A +YLE++++ N SE E I+ A+ + L + K + + VV +P F ILD+ +++ Sbjct: 9 FDRHITIFSPEGRLYQVEYAFKAIAQENITTVALKSGDCAVVATQKKVTEKNIVPETVTHLFRITKDIGCAMTGRIADSRSQVQKARYEAANFRYKYGYEMPVDVLCRRIADINQVYTQNAEMRPLGCSMVLIAYDNEIGPSVYKTDPAGYFSGFKACSVGAKTLEANSYLEKKYKPNLSE---EKAIQLAISCLSSVLAID-FKPNGIEIGVVSKSDPTFRILDEREIEE 235
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA6_YEAST (Proteasome component C7-alpha OS=Saccharomyces cerevisiae GN=SCL1 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.317e-19 Identity = 68/234 (29.06%), Postives = 116/234 (49.57%), Query Frame = 2 Query: 35 YDTDVTTWSPAGRLFQVEYAMEAVKQGSA-AIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEK-GAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF-----ENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQK 709 YD +T +SP GRL+QVEYA +A Q + ++ +R K V+ K +L + IF + IG+ + G D R + ++E + Y Y +P L ++A+ +Q+ TQR++ RP GV L +DE+ G +Y P+G Y Y+A A G + Q T LE F ++ +E + E +++ A+ + + L E K+ + V + F L E +++ Sbjct: 12 YDRHITIFSPEGRLYQVEYAFKATNQTNINSLAVRGKDCTVVISQKKVPDKLLDPTTVSYIFCISRTIGMVVNGPIPDARNAALRAKAEAAEFRYKYGYDMPCDVLAKRMANLSQIYTQRAYMRPLGVILTFVSVDEELGPSIYKTDPAGYYVGYKATATGPKQQEITTNLENHFKKSKIDHINEESWEKVVEFAITHMIDALGTEFSKNDL--EVGVATKDKFFTLSAENIEE 243
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA1_TRYBB (Proteasome subunit alpha type-1 OS=Trypanosoma brucei brucei PE=2 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 5.295e-17 Identity = 69/218 (31.65%), Postives = 110/218 (50.46%), Query Frame = 2 Query: 20 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQ-GSAAIGLRSKTHVVLGCVNKANSELSSHQK--KIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGL---DEKGA---HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFEN--FSESTREDLIKDALMAIRETLQGETLKSS 640 M R +D +T +SP G L+QVEYA +AV G + +R K V++ + +L + ++ V+D+ GV I G DG+ L + R+E Y Y Y P+ V L D AQV TQ++ R G + G+ DE GA +Y P+G A A+G + A +LE++ +N F ++++ AL A++ L GE+L++S Sbjct: 1 MSRAGFDKYITVFSPEGSLYQVEYAFKAVTYAGLLTVAIRCKDAVLVFTQHSVPDKLMRPETITSLYNVNDNTGVCITGRAPDGKALVQKARNEASEYKYRYGMPMLVSVLAKPWQDMAQVRTQQAGMRLMGTIMTFVGMEQNDEDGAWIPQIYCVDPAGG-AAVHACAVGKKQIEACAFLEKKQKNAPFHTLSQKEAAMIALAALQSAL-GESLRAS 216
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSMB_METTH (Proteasome subunit beta OS=Methanobacterium thermoautotrophicum GN=psmB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.646e-16 Identity = 60/209 (28.71%), Postives = 101/209 (48.33%), Query Frame = 2 Query: 110 QGSAAIGLRSKTHVVLGCVNKAN-SELSSHQK--KIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLIDSFD 727 +G+ +G+ K VV +A+ L +H+ KIFK+D+HI IAG AD + L +Y+++E Y + + A+ S P+ V L+ G+DE GA +Y PSG + + GS S A LE R+ + E ++ + A+ AI+ ++ +T + VA V E F +L +E +QK I++ + Sbjct: 8 KGTTTVGITCKDGVVFATERRASMGNLIAHKATDKIFKIDEHIAATIAGSVADAQSLMKYLKAEAALYRMRNSEKISIEAAAALAAN----ILHSSRFYPFIVQTLLGGVDENGAKIYSLDPSGGMIPDKFVSTGSGSPVAYGVLEDRYSD--ELYVDEAVDVAIRAIKSAMERDTYSGNGILVATVTEEEGFRMLSEEEIQKRIENLN 210
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA6_CAEEL (Proteasome subunit alpha type-6 OS=Caenorhabditis elegans GN=pas-1 PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.225e-15 Identity = 55/228 (24.12%), Postives = 105/228 (46.05%), Query Frame = 2 Query: 35 YDTDVTTWSPAGRLFQVEYAMEAVKQGS-AAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLD-EKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQ 706 +D +T +SP GR++QVEYA +A+ + A+ ++ V+ + L + ++++ +G G+ D + + + E ++ Y +P L ++AD Q TQ + R G LL D EKG +Y P+G Y + ++G + A ++LE++ + SE T + I+ A+ A++ +L + + V V F L + V+ Sbjct: 9 FDRHITIFSPEGRVYQVEYAFKAINSTNLTAVAVKGADAAVIAVQKRVPDSLIVADTVTSVYQISQSVGCCAIGMIPDAKFQIKRAQGEAASWKYKNGYDMPCELLAKKMADLNQYYTQNAEMRSLGCALLFISYDDEKGPEVYRVDPAGYYRGMKGVSVGVKQLPATSFLEKKIKKKSELTSTEAIELAIEALQTSLGIDVRSKDLEVVVVTKDNSKFTKLTSDQVE 236
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA1_ENCCU (Probable proteasome subunit alpha type-1 OS=Encephalitozoon cuniculi GN=PRE5 PE=1 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 3.324e-11 Identity = 52/214 (24.30%), Postives = 101/214 (47.20%), Query Frame = 2 Query: 56 WSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGV-GLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRET-LQGETLKSSICTVAVVGAGEPFHILD 691 ++P G + Q+++ + + G A+GL++++ VL N+ S L+ QKK+F +D +G+T DG + Y+ + + + + L T +R YGV GL + D G L P G+ E + IG R+Q+++T LE E + + E+L++ +MA++ + + L + ++ AG+ + +D Sbjct: 22 FNPEGCVKQLDFIRQTTELGGTAVGLKNRSVGVLIAHNERRSRLADIQKKVFSIDRKSLFTFSGITNDGLQIVDYLIDKSVREEVIKGRAIHFLDVFEDLLRDVFERTILDGRRLYGVSGLYMTEYD--GIRLVEFNPKGHVREVKGMGIGCRAQSSRTVLEAYCEEYEKMGVEELVRIGIMALKNAHPEDDALTGENVEIWILEAGKAVYNID 233 The following BLAST results are available for this feature:
BLAST of CX675406 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675406 ID=CX675406; Name=CX675406; organism=Citrus sinensis; type=EST; length=759bpback to top |