CX675406
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA5_SOYBN (Proteasome subunit alpha type-5 OS=Glycine max GN=PAE1 PE=2 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 4.767e-34 Identity = 87/235 (37.02%), Postives = 131/235 (55.74%), Query Frame = 2 Query: 26 RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA---QVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLI 715 R +YD V T+SP GRLFQVEYA+EA+K GS AIGL++K VVL + S L S +KI ++D+HIG A++GL AD R L + R E N+ ++Y P+ V L D A + S RP+GV LL+AG DE G LYY PSG +++ AIGS S+ A + L+ +F + T ++ AL +++ ++ + ++ V + +H+ V+ +I Sbjct: 5 RTEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGLKTKEGVVLAVEKRITSPLLEPSSVEKIMEIDEHIGCAMSGLIADARTLVEHARVETQNHRFSYGEPMTVESTTQALCDLALRFGEGDEESMSRPFGVSLLIAGHDENGPSLYYTDPSGTFWQCNGKAIGSGSEGADSSLQEQFN--KDLTLQEAETIALSILKQVMEEKVTPNN---VDIAKVAPTYHLYTPSEVEAVI 234
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA2_TRYBB (Proteasome subunit alpha type-2 OS=Trypanosoma brucei brucei PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.226e-34 Identity = 83/226 (36.73%), Postives = 125/226 (55.31%), Query Frame = 2 Query: 47 VTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQK--KIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLID 718 +TT+SP+GRL Q+EYA A +G+ A+G+++ VV+ K S L+ K+F +DDH+G +G+ D RVL R C Y TY P+P+ +LV Q++ Q TQ RP+G LLVAG D +G HLY PSG ++ ++A +IG S A+T+LE+R+ N E ED + AL+ ++E G + VV F +L E ++ +D Sbjct: 8 LTTFSPSGRLVQIEYATTAASKGTTALGVKATDGVVIAAEKKTTSPLADSLTLHKVFALDDHVGCTYSGIGPDCRVLVDAARRACQRYRLTYHEPMPISQLVRQISFLFQEFTQSGGVRPFGCSLLVAGADSRGNHLYQLDPSGTFWTWKATSIGKGSPDARTFLEKRYTN--EMEIEDAVHTALLTLKEGFDGRMTAENTQVGRVVEG--RFELLTVEQLKDYLD 229
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA7L_MACFA (Proteasome subunit alpha type-7-like OS=Macaca fascicularis GN=PSMA7L PE=2 SV=1) HSP 1 Score: 144.05 bits (362), Expect = 8.132e-34 Identity = 82/238 (34.45%), Postives = 136/238 (57.14%), Query Frame = 2 Query: 29 NQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKG-AHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ--GETLKSSICTVAVVGAGEPFHILDQETVQKLIDSFD 727 ++YD +T +SP G LFQVEYA EAVK+GS A+G+R VVLG K+ ++L + +KI +DDH+ +A AGLTAD RV+ R EC ++ T E P+ V + +A Q TQ + +RP+G+ L+ G D+ G LY PSG Y ++A AIG ++ + +LE+ + + ++ + IK A+ A+ E +Q G+ ++ +A++ +P + + V+ + + Sbjct: 3 SRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGTNIVVLGVEKKSVAKLQDERTVRKICALDDHVCMAFAGLTADARVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDNEAIKLAIKALLEVVQSGGKNIE-----LAIIRRNQPLKMFSAKEVELYVTEIE 235
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSMA_THEON (Proteasome subunit alpha OS=Thermococcus onnurineus (strain NA1) GN=psmA PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.062e-33 Identity = 91/229 (39.74%), Postives = 130/229 (56.77%), Query Frame = 2 Query: 35 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLI 715 YD +T +SP GRLFQV YA EAVK+G+ A+G++ K VVL + S+L S +KIF++DDHI A +G+ AD RVL R E Y TY P+P+ LV ++ D Q TQ RP+G LL+AG+++K LY PSG YFE++A AIGS A E + + + E IK A++A+ +TL+ E SI + + + +D+E V K + Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKEGVVLAVEKRITSKLIEPSSYEKIFQIDDHIAAAPSGIIADARVLVDRARLEAQVYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNDK-PELYETDPSGAYFEWRAVAIGSGRNTAMAIFEDHYSD--DLDMEGAIKLAILALAKTLE-EPSPESIEVAYITMKDKRWKKMDKEEVAKYL 234
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSMA_PYRFU (Proteasome subunit alpha OS=Pyrococcus furiosus GN=psmA PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.062e-33 Identity = 86/229 (37.55%), Postives = 128/229 (55.90%), Query Frame = 2 Query: 35 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLI 715 YD +T +SP GRLFQV YA EAVK+G+ A+G++ VVL + S L +KIF++DDHI A +G+ AD RVL R E Y TY P PV +V ++ D Q+ TQ RP+G LL+AG++++ LY PSG YF ++A AIGS A E ++ + + ED IK ALMA+ +T++ + +I + + F L ++ ++K + Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCGEGVVLAVEKRITSRLIEPDSYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIYRLTYGEPAPVSVIVKKICDLKQMHTQYGGVRPFGAALLMAGINDR-PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYRD--DMNLEDAIKLALMALAKTMENPS-ADNIEVAVITVKDKKFRKLTRDEIEKYL 234
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA7L_MOUSE (Proteasome subunit alpha type-7-like OS=Mus musculus GN=Psma8 PE=2 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.062e-33 Identity = 82/231 (35.50%), Postives = 134/231 (58.01%), Query Frame = 2 Query: 29 NQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKG-AHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ--GETLKSSICTVAVVGAGEPFHILDQETVQ 706 ++YD +T +SP G LFQVEYA EAVK+GS A+G+R VVLG K+ ++L + +KI +DDH+ +A AGLTAD RV+ R EC ++ T E P+ V + +A Q TQ + +RP+G+ L+ G D+ G LY PSG Y ++A AIG ++ + +LE+ + + S ++ IK A+ A+ E +Q G+ ++ +A++ +P + + ++ Sbjct: 3 SRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGTNIVVLGVEKKSVAKLQDERTVRKICALDDHVCMAFAGLTADARVVISRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGIPRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAISNDKEAIKLAIKALLEVVQSGGKNIE-----LAIIRRDQPLKMFSAKEIE 228
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSMA_THEK1 (Proteasome subunit alpha OS=Thermococcus sp. (strain KS-1) GN=psmA PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.387e-33 Identity = 85/200 (42.50%), Postives = 119/200 (59.50%), Query Frame = 2 Query: 35 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGET 628 YD +T +SP GRLFQV YA EAVK+G+ A+G++ K VVL + S+L S +KIF +DDHI A +G+ AD RVL R E Y TY P+P+ LV ++ D Q TQ RP+G LL+AG++EK L+ PSG YFE++A AIGS A E + + + ++D IK A++A+ +TL+ T Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSKLIEPSSYEKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNEK-PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRD--DIGKDDAIKLAILALAKTLEEPT 206
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSMA_PYRKO (Proteasome subunit alpha OS=Pyrococcus kodakaraensis GN=psmA PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.387e-33 Identity = 85/200 (42.50%), Postives = 119/200 (59.50%), Query Frame = 2 Query: 35 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGET 628 YD +T +SP GRLFQV YA EAVK+G+ A+G++ K VVL + S+L S +KIF +DDHI A +G+ AD RVL R E Y TY P+P+ LV ++ D Q TQ RP+G LL+AG++EK L+ PSG YFE++A AIGS A E + + + ++D IK A++A+ +TL+ T Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKWKDGVVLAVEKRITSKLIEPSSYEKIFLIDDHIAAAPSGIIADARVLVDRARLEAQIYRLTYGEPVPLTVLVKKICDLKQAHTQYGGVRPFGAALLMAGVNEK-PELFETDPSGAYFEWKAVAIGSGRNTAMAIFEEHYRD--DIGKDDAIKLAILALAKTLEEPT 206
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSMA_THEAC (Proteasome subunit alpha OS=Thermoplasma acidophilum GN=psmA PE=1 SV=2) HSP 1 Score: 142.895 bits (359), Expect = 1.812e-33 Identity = 90/231 (38.96%), Postives = 131/231 (56.71%), Query Frame = 2 Query: 35 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF-ENFSESTREDLIKDALMAIRETL-QGETLKSSICTVAVVGAGEPFHILDQETVQKLI 715 YD +T +SP GRLFQVEYA EAVK+GS A+G++ V+L K S L +KI +DD++ +GL AD RVL + R TY S + + LV ++AD+ Q TQ RPYGV L+ AG+D+ G L+ P+G EY+A AIGS A ++LER + EN E ++ + + A++ +L +GE LK+ +A + G + I DQE V+K + Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKKGSTALGMKFANGVLLISDKKVRSRLIEQNSIEKIQLIDDYVAAVTSGLVADARVLVDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEREYKENLPE---KEAVTLGIKALKSSLEEGEELKAP--EIASITVGNKYRIYDQEEVKKFL 233
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSMA_PYRHO (Proteasome subunit alpha OS=Pyrococcus horikoshii GN=psmA PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.812e-33 Identity = 87/233 (37.34%), Postives = 134/233 (57.51%), Query Frame = 2 Query: 35 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ---GETLKSSICTVAVVGAGEPFHILDQETVQKLID 718 YD +T +SP GRLFQV YA EAVK+G+ A+G++ VVL + S L + +KIF++DDHI A +G+ AD RVL R E + TY P P+ +V ++ D Q+ TQ RP+G LL+AG++EK LY PSG YF ++A AIGS A E ++++ + + E+ IK A+ A+ +T++ E ++ +I TV + F L +E ++K ++ Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCNEGVVLAVEKRITSRLIEPESYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVNEK-PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEEKYKD--DMSLEEAIKLAIFALAKTMEKPSAENIEVAIITV----KDKKFRKLSREEIEKYLN 235 The following BLAST results are available for this feature:
BLAST of CX675406 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675406 ID=CX675406; Name=CX675406; organism=Citrus sinensis; type=EST; length=759bpback to top |