CX675406
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSMA_PYRAB (Proteasome subunit alpha OS=Pyrococcus abyssi GN=psmA PE=3 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.366e-33 Identity = 86/232 (37.07%), Postives = 133/232 (57.33%), Query Frame = 2 Query: 35 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ---GETLKSSICTVAVVGAGEPFHILDQETVQKLI 715 YD +T +SP GRLFQV YA EAVK+G+ A+G++ K VVL + S L + +KIF++DDHI A +G+ AD RVL R E + TY P P+ +V ++ D Q+ TQ RP+G LL+AG+++K LY PSG YF ++A AIGS A E ++ + + T ++ IK A+ A+ +T++ E ++ ++ TV + F L +E ++K + Sbjct: 10 YDRAITVFSPDGRLFQVNYAREAVKRGATAVGVKCKDGVVLAVEKRITSRLIEPESYEKIFQIDDHIAAASSGIIADARVLVNRARLEAQIHRLTYGEPAPLAVIVKKICDLKQMHTQYGGVRPFGAALLMAGVNDK-PELYETDPSGAYFAWKAVAIGSGRNTAMAIFEDKYRD--DMTLDEAIKLAIFALAKTMEKPSAENIEVAVITV----KDKKFRKLSKEEIEKFL 234
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA2A_ARATH (Proteasome subunit alpha type-2-A OS=Arabidopsis thaliana GN=PAB1 PE=1 SV=1) HSP 1 Score: 142.51 bits (358), Expect = 2.366e-33 Identity = 83/222 (37.39%), Postives = 128/222 (57.66%), Query Frame = 2 Query: 29 NQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHIL 688 +QY +TT+SP+G+L Q+E+A+ AV G ++G+++ VV+ K S L + +KI + +IGV +G+ D RVL R R + Y Y+ P+PV +LV + A Q TQ RP+GV LLVAG D+KG LY PSG+YF ++A A+G AKT+LE+R+ E +D I A++ ++E +GE + S + +GA + F +L Sbjct: 4 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQKIQHLTPNIGVVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDME--LDDAIHTAILTLKEGFEGE-ISSKNIEIGKIGADKVFRVL 222
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA7B_XENLA (Proteasome subunit alpha type-7-B OS=Xenopus laevis GN=psma7-B PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.090e-33 Identity = 83/232 (35.78%), Postives = 136/232 (58.62%), Query Frame = 2 Query: 35 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ--GETLKSSICTVAVVGAGEPFHILDQETVQKLI 715 YD +T +SP G LFQVEYA EAVK+GS A+G+R K VVLG K+ ++L + +KI +D+++ +A AGLTAD R++ R EC ++ T E P+ V + +A Q TQ + +RP+G+ L+ G D G LY PSG Y ++A AIG +++ + +LE+ + + + T + IK + A+ E +Q G+ ++ +AV+ +P IL+ E +++ + Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKEIVVLGVEKKSVAKLQDERTVRKICALDENVFMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKHYTDEAIETDDLTIKLVIKALLEVVQSGGKNIE-----LAVMRRDQPLKILNPEEIERYV 229
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA7A_XENLA (Proteasome subunit alpha type-7-A OS=Xenopus laevis GN=psma7-A PE=2 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 3.090e-33 Identity = 83/232 (35.78%), Postives = 136/232 (58.62%), Query Frame = 2 Query: 35 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ--GETLKSSICTVAVVGAGEPFHILDQETVQKLI 715 YD +T +SP G LFQVEYA EAVK+GS A+G+R K VVLG K+ ++L + +KI +D+++ +A AGLTAD R++ R EC ++ T E P+ V + +A Q TQ + +RP+G+ L+ G D G LY PSG Y ++A AIG +++ + +LE+ + + + T + IK + A+ E +Q G+ ++ +AV+ +P IL+ E +++ + Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKEIVVLGVEKKSVAKLQDERTVRKICALDENVFMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKHYTDEAIETDDLTIKLVIKALLEVVQSGGKNIE-----LAVMRRDQPLKILNPEEIERYV 229
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSMA_SULSO (Proteasome subunit alpha OS=Sulfolobus solfataricus GN=psmA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.036e-33 Identity = 80/197 (40.61%), Postives = 117/197 (59.39%), Query Frame = 2 Query: 35 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVN-KANSELSSHQ-KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ 619 YD +T +SP G L+QV+YA EAVK+G AIG++SK+ VV+ KA S L +K+F +DDH+G + AGL +DGRVL Y R+ + + Y+ P+ + L +AD Q+ TQ RP+GV L++AG+D+ L+ PSG Y YQA AIG A +LE+ ++ + E+ I AL A+ TL+ Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTAIGIKSKSSVVIASEKRKAQSLLDVDSIEKVFLIDDHVGCSFAGLASDGRVLIDYARNIALQHRLIYDEPVSIDYLTKSVADVKQMYTQHGGVRPFGVALVIAGIDKSVPKLFMTEPSGQYMPYQAVAIGQGYYTATEFLEKNYK--EDLNVEETILLALKALSATLK 204
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSMA_METTH (Proteasome subunit alpha OS=Methanobacterium thermoautotrophicum GN=psmA PE=3 SV=1) HSP 1 Score: 141.739 bits (356), Expect = 4.036e-33 Identity = 81/239 (33.89%), Postives = 131/239 (54.81%), Query Frame = 2 Query: 35 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLIDSFDIAGTEE 745 YD +T +SP GRLFQVEYA EAVK+G+ ++G++SK +VL + S+L + +KIF++D+HIG A +GL AD R + R E TY P+ V L ++ D Q+ TQ RP+G L++ G++ +G L+ PSG EY+A AIG+ AA E+++ + + I+ AL A+ E +G+T S+ + A + + L + ++ ++ I +E Sbjct: 9 YDRAITVFSPDGRLFQVEYAREAVKRGTTSLGVKSKEGIVLVVDKRPTSKLVEPKSIEKIFQIDEHIGAATSGLVADARAIIEKARLEAQINRITYNEPIRVESLAKKICDMKQMYTQHGGVRPFGTALIIGGVNGRGCRLFETDPSGALIEYKATAIGAGRPAAMEEFEKKYSD--DMNLNQAIELALDAVYEATEGKTTPESVEIAVIEAADKKYRRLPDDEIRDHVEELLIRKEKE 245
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA5_MOUSE (Proteasome subunit alpha type-5 OS=Mus musculus GN=Psma5 PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.884e-33 Identity = 84/237 (35.44%), Postives = 138/237 (58.23%), Query Frame = 2 Query: 26 RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA-----QVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLI 715 R++YD V T+SP GRLFQVEYA+EA+K GS AIG+++ V L + S L S +KI ++D HIG A++GL AD + L R E N+ +TY + V + +++ A + + RP+GV LL G+DEKG L++ PSG + + A AIGS S+ A++ L+ + T ++ IK +L+ +++ ++ E L ++ +A V G+ FH+ +E ++++I Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYH--KSMTLKEAIKSSLIILKQVME-EKLNATNIELATVQPGQNFHMFTKEELEEVI 238
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA5_HUMAN (Proteasome subunit alpha type-5 OS=Homo sapiens GN=PSMA5 PE=1 SV=3) HSP 1 Score: 140.969 bits (354), Expect = 6.884e-33 Identity = 84/237 (35.44%), Postives = 138/237 (58.23%), Query Frame = 2 Query: 26 RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA-----QVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLI 715 R++YD V T+SP GRLFQVEYA+EA+K GS AIG+++ V L + S L S +KI ++D HIG A++GL AD + L R E N+ +TY + V + +++ A + + RP+GV LL G+DEKG L++ PSG + + A AIGS S+ A++ L+ + T ++ IK +L+ +++ ++ E L ++ +A V G+ FH+ +E ++++I Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYH--KSMTLKEAIKSSLIILKQVME-EKLNATNIELATVQPGQNFHMFTKEELEEVI 238
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA5_ENTHI (Proteasome subunit alpha type-5 OS=Entamoeba histolytica PE=3 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 6.884e-33 Identity = 88/239 (36.82%), Postives = 137/239 (57.32%), Query Frame = 2 Query: 20 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSE--LSSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWK-----RPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLI 715 M +N+ D V T+S GRLFQVEYA EA+K GS IG+++K VVL + +S L S +KI ++DDHIG A++GLTAD R L R E N+ + Y+ P+ V + ++D + + S K RP+GV LL+AG+DE G L+ PSG + E+ A A G+ ++AA++ L ++ N S + RE I AL +++ ++ + ++ V + F I+D ++ LI Sbjct: 3 MTKNENDHGVNTFSSEGRLFQVEYATEAMKLGSTVIGIQTKEGVVLAVEKRISSPLMLGSSIEKIIEIDDHIGAAVSGLTADARTLIDNARLEAQNHRFMYDEPINVEVVAQAISDLSLRFGEGSRKKKVMSRPFGVALLIAGVDETGPRLFQTDPSGMFIEFYAKATGAGTEAAQSILHEKY-NKSMTLREAEIL-ALSTLKQVMEEKLNSKNVEVALVTVEKKKFEIMDTAFIENLI 239
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA5_BOVIN (Proteasome subunit alpha type-5 OS=Bos taurus GN=PSMA5 PE=1 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.884e-33 Identity = 84/237 (35.44%), Postives = 138/237 (58.23%), Query Frame = 2 Query: 26 RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA-----QVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLI 715 R++YD V T+SP GRLFQVEYA+EA+K GS AIG+++ V L + S L S +KI ++D HIG A++GL AD + L R E N+ +TY + V + +++ A + + RP+GV LL G+DEKG L++ PSG + + A AIGS S+ A++ L+ + T ++ IK +L+ +++ ++ E L ++ +A V G+ FH+ +E ++++I Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYAIEAIKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYH--KSMTLKEAIKSSLIILKQVME-EKLNATNIELATVQPGQNFHMFTKEELEEVI 238 The following BLAST results are available for this feature:
BLAST of CX675406 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675406 ID=CX675406; Name=CX675406; organism=Citrus sinensis; type=EST; length=759bpback to top |