CX675406
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA4A_ORYSJ (Proteasome subunit alpha type-4-1 OS=Oryza sativa subsp. japonica GN=PAC1 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 6.884e-33 Identity = 86/237 (36.29%), Postives = 135/237 (56.96%), Query Frame = 2 Query: 32 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL---SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDE-KGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVV----GAGE-PFHILDQETVQKLI 715 +YD+ T +SP GRL+QVEYAMEA+ +A+G+ + VVL K S+L S +K++K+D H+ A+AG+ +D +L R Y+ +Y+ P+PV +LV L D Q TQ RP+GV L AG D+ G LY + PSGNY ++A A+G+ SQAA++ L++ + + TRE+ + AL + +T+ +L + +A V G GE + + E + KL+ Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRD--GMTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQYQVCSPEAMGKLL 238
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA4A_ORYSI (Proteasome subunit alpha type-4-1 OS=Oryza sativa subsp. indica GN=OsI_021120 PE=1 SV=2) HSP 1 Score: 140.969 bits (354), Expect = 6.884e-33 Identity = 86/237 (36.29%), Postives = 135/237 (56.96%), Query Frame = 2 Query: 32 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL---SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDE-KGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVV----GAGE-PFHILDQETVQKLI 715 +YD+ T +SP GRL+QVEYAMEA+ +A+G+ + VVL K S+L S +K++K+D H+ A+AG+ +D +L R Y+ +Y+ P+PV +LV L D Q TQ RP+GV L AG D+ G LY + PSGNY ++A A+G+ SQAA++ L++ + + TRE+ + AL + +T+ +L + +A V G GE + + E + KL+ Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRD--GMTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQYQVCSPEAMGKLL 238
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA7_HUMAN (Proteasome subunit alpha type-7 OS=Homo sapiens GN=PSMA7 PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.991e-33 Identity = 83/232 (35.78%), Postives = 135/232 (58.19%), Query Frame = 2 Query: 35 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ--GETLKSSICTVAVVGAGEPFHILDQETVQKLI 715 YD +T +SP G LFQVEYA EAVK+GS A+G+R + VVLG K+ ++L + +KI +DD++ +A AGLTAD R++ R EC ++ T E P+ V + +A Q TQ + +RP+G+ L+ G D G LY PSG Y ++A AIG +++ + +LE+ + + + T + IK + A+ E +Q G+ ++ +AV+ + IL+ E ++K + Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGRDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKALLEVVQSGGKNIE-----LAVMRRDQSLKILNPEEIEKYV 229
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA4B_ORYSJ (Proteasome subunit alpha type-4-2 OS=Oryza sativa subsp. japonica GN=Os06g0167600 PE=2 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.991e-33 Identity = 86/237 (36.29%), Postives = 135/237 (56.96%), Query Frame = 2 Query: 32 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL---SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDE-KGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVV----GAGE-PFHILDQETVQKLI 715 +YD+ T +SP GRL+QVEYAMEA+ +A+G+ + VVL K S+L S +K++K+D H+ A+AG+ +D +L R Y+ +Y+ P+PV +LV L D Q TQ RP+GV L AG D+ G LY + PSGNY ++A A+G+ SQAA++ L++ + + TRE+ + AL + +T+ +L + +A V G GE + + E + KL+ Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRD--GLTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQYQVCSPEAMGKLL 238
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA4B_ORYSI (Proteasome subunit alpha type-4-2 OS=Oryza sativa subsp. indica GN=OsI_021067 PE=1 SV=1) HSP 1 Score: 140.584 bits (353), Expect = 8.991e-33 Identity = 86/237 (36.29%), Postives = 135/237 (56.96%), Query Frame = 2 Query: 32 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL---SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDE-KGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVV----GAGE-PFHILDQETVQKLI 715 +YD+ T +SP GRL+QVEYAMEA+ +A+G+ + VVL K S+L S +K++K+D H+ A+AG+ +D +L R Y+ +Y+ P+PV +LV L D Q TQ RP+GV L AG D+ G LY + PSGNY ++A A+G+ SQAA++ L++ + + TRE+ + AL + +T+ +L + +A V G GE + + E + KL+ Sbjct: 4 RYDSRTTIFSPEGRLYQVEYAMEAIGNAGSALGVLAADGVVLVGEKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDANILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHHGFQLYMSDPSGNYSGWKAAAVGANSQAAQSMLKQDYRD--GLTREEAVALALKVLSKTMDSTSLTAEKLELAEVFLQPGTGEVQYQVCSPEAMGKLL 238
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA7_CAEEL (Proteasome subunit alpha type-7 OS=Caenorhabditis elegans GN=pas-4 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.174e-32 Identity = 80/232 (34.48%), Postives = 124/232 (53.45%), Query Frame = 2 Query: 29 NQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLI 715 N+YD +T +SP G LFQVEYA EAVK+GS A+G+R K +V+G K+ L + +KI +DDH+ +A AGL+AD RVL R EC +Y T E P+ V + +A+ Q TQ +RP+G+ +L+ G D G L+ PSG Y+EY A A G + + YLE ++ + +K + ++ + + + I + V +L E ++ L+ Sbjct: 2 NRYDRAITIFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDCIVIGVEKKSIPALQDDRTIRKIHMIDDHVMLAFAGLSADARVLVDRARIECQSYKLTLEDPVTVAYISRYIANTKQRFTQSPGRRPFGISMLIGGFDHDGTPRLFKTEPSGAYYEYVANATGRGEKPVREYLEEQYSEENTVDEATTLKLVVKSLAQVVPPGSQNIEIAVMKKVNDELQQRVLSTEEIEALL 233
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA71_DROME (Proteasome subunit alpha type-7-1 OS=Drosophila melanogaster GN=Pros28.1 PE=1 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 1.534e-32 Identity = 80/242 (33.06%), Postives = 132/242 (54.55%), Query Frame = 2 Query: 29 NQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQK--KIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKG-AHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLIDSFDIAGTEE 745 ++YD VT +SP G L QVEYA EAV++GS A+G+R VVLG K+ ++L +K KI +D+H+ +A AGLTAD R++ + EC ++ E P+ + + +A Q TQ + +RP+G+ L+ G D G AHL+ PSG ++EY+A A G ++ + + E+ + + +K A+ A+ E Q + VA++ G+P +LD + + + + EE Sbjct: 3 SRYDRAVTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKKSVAQLQEDRKVRKICMLDNHVVMAFAGLTADARIMINRAQVECQSHRLNVEDPVTLEYITRFIAQLKQKYTQSNGRRPFGISCLIGGFDADGSAHLFQTEPSGIFYEYKANATGRSAKVVREFFEKSYREEEVANEHGAVKLAIRALLEVAQS---GQNNLEVAIMENGKPLKMLDTDVITDYVKIIEKEKEEE 241
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA2B_ARATH (Proteasome subunit alpha type-2-B OS=Arabidopsis thaliana GN=PAB2 PE=1 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 2.003e-32 Identity = 81/222 (36.49%), Postives = 126/222 (56.76%), Query Frame = 2 Query: 29 NQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHIL 688 +QY +TT+SP+G+L Q+E+A+ AV G ++G+++ VV+ K S L + +KI + +IG +G+ D RVL R R + Y Y+ P+PV +LV + A Q TQ RP+GV LLVAG D+KG LY PSG+YF ++A A+G AKT+LE+R+ E +D I A++ ++E +GE + S + +G + F +L Sbjct: 4 SQYSFSLTTFSPSGKLVQIEHALTAVGSGQTSLGIKASNGVVIATEKKLPSILVDEASVQKIQHLTPNIGTVYSGMGPDFRVLVRKSRKQAEQYLRLYKEPIPVTQLVRETATVMQEFTQSGGVRPFGVSLLVAGYDDKGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTEDME--LDDAIHTAILTLKEGFEGE-ISSKNIEIGKIGTDKVFRVL 222
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA2_CARAU (Proteasome subunit alpha type-2 OS=Carassius auratus GN=psma2 PE=2 SV=3) HSP 1 Score: 139.043 bits (349), Expect = 2.616e-32 Identity = 82/225 (36.44%), Postives = 123/225 (54.67%), Query Frame = 2 Query: 35 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQK--KIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQG----ETLKSSICTVAVVGAGEPFHILD 691 Y +TT+SP+G+L Q+EYA+ AV G+ ++G+++ VVL K S L Q KI + HIG+ +G+ D RVL R R Y Y+ P+P G+LV ++A Q TQ RP+GV LL+AG DE +L+ + PSG YF ++A A+G KT+LE+R+ E ED I A++ ++E+ +G E ++ IC A P + D Sbjct: 6 YSFSLTTFSPSGKLVQIEYALAAVAAGAPSVGIKASNGVVLATEKKQKSILYDEQSVHKIEPITKHIGMVYSGMGPDYRVLVRRARKLAQQYFLVYQEPIPTGQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEDRPYLFQSDPSGAYFAWKATAMGKSYVNGKTFLEKRYNEDLE--LEDAIHTAILTLKESFEGQMTEENIEVGICNEAGFRRLSPAEVKD 228
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA7_PONAB (Proteasome subunit alpha type-7 OS=Pongo abelii GN=PSMA7 PE=2 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 3.416e-32 Identity = 81/232 (34.91%), Postives = 135/232 (58.19%), Query Frame = 2 Query: 35 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ--GETLKSSICTVAVVGAGEPFHILDQETVQKLI 715 YD +T +SP G LFQVEYA EA+K+GS A+G+R + VVLG K+ ++L + +KI +DD++ +A AGLTAD R++ R EC ++ T E + V + +A Q TQ + +RP+G+ L+ G D G LY PSG Y ++A AIG +++ + +LE+ + + + T + IK + A+ E +Q G+ ++ +AV+ +P IL+ E +++ + Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAIKKGSTAVGVRGRDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDSVTVEYITRYIASLKQRYTQSNGRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVREFLEKNYTDEAIETDDLTIKLVIKALLEVVQSGGKNIE-----LAVMRRDQPLKILNPEEIEEYV 229 The following BLAST results are available for this feature:
BLAST of CX675406 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675406 ID=CX675406; Name=CX675406; organism=Citrus sinensis; type=EST; length=759bpback to top |