CX675406
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSMA_THEVO (Proteasome subunit alpha OS=Thermoplasma volcanium GN=psmA PE=3 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 4.462e-32 Identity = 91/230 (39.57%), Postives = 126/230 (54.78%), Query Frame = 2 Query: 35 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF-ENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLI 715 YD +T +SP GRLFQVEYA EAVK+GS A+GL+ V+L K S+L +KI +DD++ +GL AD RVL + R TY S + + LV ++AD+ Q TQ RPYGV L+ AG+D+ G L+ P+G EY+A AIGS A ++LE+ + E SE L AL A E +GE LK+ +A + G + I E V+K + Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKKGSTALGLKFSNGVLLISDKKIRSKLIEQNSLEKIQLIDDYVAAVTSGLVADARVLIDFARISAQQEKVTYGSLVNIENLVKRVADQMQQYTQYGGVRPYGVSLIFAGIDQIGPRLFDCDPAGTINEYKATAIGSGKDAVVSFLEKEYKEGLSEKEAVTLGIKALKASLE--EGEELKAP--EIASITVGSKYRIYGAEEVKKFL 233
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA7L_HUMAN (Proteasome subunit alpha type-7-like OS=Homo sapiens GN=PSMA8 PE=1 SV=3) HSP 1 Score: 138.272 bits (347), Expect = 4.462e-32 Identity = 82/244 (33.61%), Postives = 137/244 (56.15%), Query Frame = 2 Query: 29 NQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIA------GLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKG-AHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ--GETLKSSICTVAVVGAGEPFHILDQETVQKLIDSFD 727 ++YD +T +SP G LFQVEYA EAVK+GS A+G+R VVLG K+ ++L + +KI +DDH+ +A A GLTAD RV+ R EC ++ T E P+ V + +A Q TQ + +RP+G+ L+ G D+ G + LY PSG Y ++A AIG ++ + +LE+ + + ++ + IK A+ A+ E +Q G+ ++ +A++ +P + + V+ + + Sbjct: 3 SRYDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGIRGTNIVVLGVEKKSVAKLQDERTVRKICALDDHVCMAFAVLTIFIGLTADARVVINRARVECQSHKLTVEDPVTVEYITRFIATLKQKYTQSNGRRPFGISALIVGFDDDGISRLYQTDPSGTYHAWKANAIGRSAKTVREFLEKNYTEDAIASDSEAIKLAIKALLEVVQSGGKNIE-----LAIIRRNQPLKMFSAKEVELYVTEIE 241
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA72_DROME (Proteasome subunit alpha type-7-1A OS=Drosophila melanogaster GN=Pros28.1A PE=2 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 4.462e-32 Identity = 79/232 (34.05%), Postives = 132/232 (56.90%), Query Frame = 2 Query: 29 NQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKG-AHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLI 715 ++Y +T +SP G L QVEYA EAV++GS A+G+R VVLG + SE+ + +KI +D H+ +A AGLTAD R+L + EC ++ +E+ + + + LA Q TQ + +RP+G+ L+ G+D G A L++ PSG + EY+A A G + + + E+ + + +T+ D IK A+ A+ E Q ++ VAV+ G+P +LD + +++ Sbjct: 3 SRYGRALTIFSPDGHLLQVEYAQEAVRKGSTAVGVRGANCVVLGVEKSSVSEMQEDRTVRKISMLDRHVALAFAGLTADARILINRGQVECQSHRLNFENQVTLEYITRYLAQLKQKYTQCNGRRPFGISCLIGGIDADGSARLFHTEPSGIFHEYKATATGRWANTVREFFEKAYSDHEVTTKCDAIKLAMRALLEVTQMSQMR---LEVAVLENGKPMKMLDSVVISEIV 231
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA2_SCHPO (Probable proteasome subunit alpha type-2 OS=Schizosaccharomyces pombe GN=SPCC1442.06 PE=2 SV=1) HSP 1 Score: 138.272 bits (347), Expect = 4.462e-32 Identity = 84/214 (39.25%), Postives = 124/214 (57.94%), Query Frame = 2 Query: 29 NQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELS--SHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSEC-INYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVV 661 ++Y +TT+SP G+L Q+EYA+ AV G ++G+++ VVL K SEL+ + +K+ + IG+ +G+ D RVL R Y Y P LV ++A Q TQ RP+GV LLVAG+DEKG LY PSG YF ++A AIG S AAKT+LE+R+ + E +D + A++A++ET +GE + +I +AVV Sbjct: 3 DKYAFSLTTFSPNGKLVQIEYALNAVNAGVTSVGIKATDGVVLATEKKPTSELAIGASLEKVCAITPDIGMVYSGMGPDFRVLVDKSRKVAQTTYKKIYNEYPPTKILVQEIASVMQESTQSGGVRPFGVSLLVAGMDEKGPSLYQVDPSGTYFAWKATAIGKSSTAAKTFLEKRYND--ELELDDAVHTAILALKETFEGELTEDNI-EIAVV 213
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSMA_METJA (Proteasome subunit alpha OS=Methanocaldococcus jannaschii GN=psmA PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.828e-32 Identity = 86/231 (37.23%), Postives = 126/231 (54.55%), Query Frame = 2 Query: 35 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF-ENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLID 718 YD +T +SP GRL+QVEYA EAV++G+ AIG+ K VVL + S+L + +KIF++DDH+ A +GL AD RVL R E Y TY + + L ++ D Q TQ RP+GV LL+AG+D+ A L+ PSG EY+A AIGS LE+ + ++ + +L AL E ++ E + +C + V A F + E ++KLI+ Sbjct: 9 YDRAITVFSPEGRLYQVEYAREAVRRGTTAIGIACKDGVVLAVDRRITSKLVKIRSIEKIFQIDDHVAAATSGLVADARVLIDRARLEAQIYRLTYGEEISIEMLAKKICDIKQAYTQHGGVRPFGVSLLIAGIDKNEARLFETDPSGALIEYKATAIGSGRPVVMELLEKEYRDDITLDEGLELAITALTKANEDIKPENV--DVCIITVKDA--QFKKIPVEEIKKLIE 235
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA5_RAT (Proteasome subunit alpha type-5 OS=Rattus norvegicus GN=Psma5 PE=2 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.828e-32 Identity = 83/237 (35.02%), Postives = 137/237 (57.81%), Query Frame = 2 Query: 26 RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA-----QVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLI 715 R++YD V T+SP GRLFQVEYA+E K GS AIG+++ V L + S L S +KI ++D HIG A++GL AD + L R E N+ +TY + V + +++ A + + RP+GV LL G+DEKG L++ PSG + + A AIGS S+ A++ L+ + +T ++ IK +L+ +++ ++ E L ++ +A V G+ FH+ +E ++++I Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYAIEGHKLGSTAIGIQTSEGVCLAVEKRITSPLMEPSSIEKIVEIDAHIGCAMSGLIADAKTLIDKARVETQNHWFTYNETMTVESVTQAVSNLALQFGEEDADPGAMSRPFGVALLFGGVDEKGPQLFHMDPSGTFVQCDARAIGSASEGAQSSLQEVYH--KSTTLKEAIKSSLIILKQVME-EKLNATNIELATVQPGQNFHMFTKEELEEVI 238
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA6A_ARATH (Proteasome subunit alpha type-6-A OS=Arabidopsis thaliana GN=PAA1 PE=1 SV=2) HSP 1 Score: 137.502 bits (345), Expect = 7.611e-32 Identity = 82/230 (35.65%), Postives = 131/230 (56.96%), Query Frame = 2 Query: 35 YDTDVTTWSPAGRLFQVEYAMEAVKQ-GSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNC-PSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEP-FHILDQETVQK 709 YD +T +SP GRLFQVEYA +AVK G +IG+R K V + K +L S +F + +IG+ G+TAD R L + R++ + +TY +PV L +ADK+QV TQ ++ RP GV +V G+DE+ L Y C P+G+++ ++A + G + Q A +LE++ + T ++ ++ A+ A++ LQ E K++ V VV A P F L E +++ Sbjct: 9 YDRHITIFSPEGRLFQVEYAFKAVKTAGITSIGVRGKDSVCVVTQKKVPDKLLDQSSVTHLFPITKYIGLVATGITADARSLVQQARNQAAEFRFTYGYEMPVDILAKWIADKSQVYTQHAYMRPLGVVAMVMGVDEENGPLLYKCDPAGHFYGHKATSAGMKEQEAVNFLEKKMKENPSFTFDETVQTAISALQSVLQ-EDFKATEIEVGVVRAENPEFRALTTEEIEE 237
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSMA_PICTO (Proteasome subunit alpha OS=Picrophilus torridus GN=psmA PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 9.940e-32 Identity = 85/231 (36.80%), Postives = 124/231 (53.68%), Query Frame = 2 Query: 35 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRF-ENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLID 718 YD +T +SP GRLFQVEYA EAVK+GS A+G++ K V L K S L + +KI +DD + +GL AD RVL + R TY S + + LV ++AD+ Q TQ RPYGV ++ AGLD G L+ P+G EY+ +IG+ YLE+ + EN SE ++ I+ + A++ + E+ +A + GE FH+ E V K ++ Sbjct: 8 YDRAITVFSPDGRLFQVEYAREAVKKGSTALGIKFKDGVALISEKKVRSRLVEKTSLEKIQLIDDRVAAVTSGLVADARVLIDFARISDQQEKVTYGSLMNIENLVKRVADQMQQYTQYGGVRPYGVSIIFAGLDSIGPRLFDCDPAGTINEYKCVSIGAGKDQVTAYLEKEYKENLSE---DEAIRMGIAALKSAVADESSMKE-PEIASIKMGETFHVFTSEEVSKYLN 234
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA7_CICAR (Proteasome subunit alpha type-7 OS=Cicer arietinum GN=PAD1 PE=2 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 9.940e-32 Identity = 79/212 (37.26%), Postives = 125/212 (58.96%), Query Frame = 2 Query: 32 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLD--EKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ--GETLKSSICT 649 +YD +T +SP G LFQVEYA+EAV++G+AA+G+R +VVLG K+ ++L + +KI +DDHI +A AGL AD RVL R EC ++ T E P+ V + +A Q TQ RP+G+ L+ G D LY PSG + ++A A G S + + +LE+ NF E++ ++ +K A+ A+ E ++ G+ ++ ++ T Sbjct: 3 RYDRAITVFSPDGHLFQVEYALEAVRKGNAAVGVRGTDNVVLGVEKKSTAKLQDTRSVRKIVNLDDHIALACAGLKADARVLINRARVECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIVGFDPYTGSPSLYQTDPSGTFSAWKANATGRNSNSIREFLEK---NFKETSGQETVKLAIRALLEVVESGGKNIEVAVMT 211
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA5_YEAST (Proteasome component PUP2 OS=Saccharomyces cerevisiae GN=PUP2 PE=1 SV=2) HSP 1 Score: 137.117 bits (344), Expect = 9.940e-32 Identity = 87/251 (34.66%), Postives = 135/251 (53.78%), Query Frame = 2 Query: 26 RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA------QVCTQRSWKRPYGVGLLVAGLD-EKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLIDSFDIAGTEEGP 751 R++YD V+T+SP GRLFQVEY++EA+K GS AIG+ +K VVLG +A S L S +KI ++D HIG A++GLTAD R + + R+ + ++ Y+ + V L + D A +R RP+GV LL+AG D + G L++ PSG ++ Y A AIGS S+ A+ L + + +L+ ++ I + + E L + ++ + + F I D E +LI E P Sbjct: 5 RSEYDRGVSTFSPEGRLFQVEYSLEAIKLGSTAIGIATKEGVVLGVEKRATSPLLESDSIEKIVEIDRHIGCAMSGLTADARSMIEHARTAAVTHNLYYDEDINVESLTQSVCDLALRFGEGASGEERLMSRPFGVALLIAGHDADDGYQLFHAEPSGTFYRYNAKAIGSGSEGAQAELLNEWHSSLTLKEAELL---VLKILKQVMEEKLDENNAQLSCITKQDGFKIYDNEKTAELIKELKEKEAAESP 252 The following BLAST results are available for this feature:
BLAST of CX675406 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675406 ID=CX675406; Name=CX675406; organism=Citrus sinensis; type=EST; length=759bpback to top |