CX675406
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA2_NEUCR (Probable proteasome subunit alpha type-2 OS=Neurospora crassa GN=B14D6.510 PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.298e-31 Identity = 86/229 (37.55%), Postives = 128/229 (55.90%), Query Frame = 2 Query: 29 NQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELS--SHQKKIFKVDDHIGVAIAGLTADGRVL-SRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQ 706 ++Y +TT+SP+G+L Q+EYA+ AV QG A+G+++ +VL K++S L+ S KI + +IG+ +G+ D RVL R + Y Y P LV +A Q TQ RPYGV LL+AG DE G LY PSG+YF ++A AIG + AKT+LE+R+ E ED + AL+ ++ET++GE + + +VG H+L E V+ Sbjct: 3 DRYSFSLTTFSPSGKLVQIEYALNAVNQGVTALGIKATNGIVLATEKKSSSPLADPSSLSKISLITPNIGMVYSGMGPDYRVLVDRARKVSHTGYKRIYNEYPPTRILVQDVARVMQEATQSGGVRPYGVSLLIAGWDEGGPMLYQVDPSGSYFPWKATAIGKNATTAKTFLEKRYTEGLE--LEDAVHIALLTLKETIEGE-MNGDTIEIGIVGPPAD-HLLGVEGVE 227
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSMA_METS5 (Proteasome subunit alpha OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=psmA PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.696e-31 Identity = 79/202 (39.11%), Postives = 119/202 (58.91%), Query Frame = 2 Query: 35 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVV-LGCVNKANSELSSHQ-KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ-GETL 631 YD +T +SP G L+QV+YA EAVK+G +G+++K VV LG KA+ L +K+F +DDH+G + AGL +DGR+L Y R+ + + Y+ P+ + L ++D Q+ TQ RP+GV L+V G+D L+ PSG + YQA AIG A YLE+ ++ + + E+ I AL A++ TL+ GE L Sbjct: 10 YDRAITIFSPDGSLYQVDYAFEAVKKGWTTLGVKTKNAVVILGEKKKASQLLDVDSIEKVFLLDDHVGCSFAGLASDGRILIDYARNSSLQHRLVYDEPISIDYLTKLISDVKQMYTQHGGVRPFGVALIVGGVDRGVTKLFMTEPSGQFMPYQAVAIGQGGYNATDYLEKNYK--EDLSVEETILLALNALKVTLKPGEKL 209
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA6_TOBAC (Proteasome subunit alpha type-6 OS=Nicotiana tabacum GN=PAA1 PE=2 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.696e-31 Identity = 82/230 (35.65%), Postives = 132/230 (57.39%), Query Frame = 2 Query: 35 YDTDVTTWSPAGRLFQVEYAMEAVKQ-GSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLD-EKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEP-FHILDQETVQK 709 YD +T +SP GRLFQVEYA +AVK G +IG+R K V + K +L + +F + ++G+ G+TAD R L + R+E + + Y +PV L +ADK+QV TQ ++ RP GV ++ G+D EKG L+ P+G++F ++A + GS+ Q A +LE++ +N + E+ ++ A+ A++ LQ E K+S V VV +P F +L E + + Sbjct: 9 YDRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSVCVVTQKKVPDKLLDQTSVSHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFKYGYEMPVDVLSKWIADKSQVYTQHAYMRPLGVVAMILGIDEEKGPQLFKCDPAGHFFGHKATSAGSKEQEAINFLEKKMKNDPAFSYEETVQTAISALQSVLQ-EDFKASEIEVGVVKKEDPIFRVLTTEEIDE 237
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA5_DICDI (Proteasome subunit alpha type-5 OS=Dictyostelium discoideum GN=psmA5 PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.696e-31 Identity = 81/242 (33.47%), Postives = 135/242 (55.79%), Query Frame = 2 Query: 26 RNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL--SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKA------QVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLIDSFD 727 R++YD V T+SP GRLFQVEYA+EA+K G IG++ + VVL + S L S +K+ ++D H+ A++GL AD R + + R E N+ + Y P+ V V + D A + + RP+GV LL+AG+DEKG LYY+ PSG + ++ A AIG+ S+ A+T L+ ++ T + K AL +++ ++ +++ + A + F I ++E + +I + + Sbjct: 5 RSEYDRGVNTFSPEGRLFQVEYALEAIKLG---IGVQCEEGVVLAVEKRLTSPLLEPSSIQKVVEIDYHLICALSGLVADARTIIDHARIETQNHRFNYNEPMGVESCVQSICDLALRFGENRNSGEERMSRPFGVALLIAGIDEKGPSLYYSDPSGTFTQFHAKAIGAGSEGAQTTLQEKYS--KTLTIAECQKLALTTLKQVMEEAITTTNVELAVITKADQKFKIYNKEELATVIQTLE 241
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSMA1_HALVO (Proteasome subunit alpha 1 OS=Halobacterium volcanii GN=psmA1 PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.214e-31 Identity = 84/239 (35.15%), Postives = 128/239 (53.56%), Query Frame = 2 Query: 35 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELS--SHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLIDSFDIAGTEE 745 YD +T +SP GRL+QVEYA EAVK+G+A+IG+R+ VVL ++ S L + +KI K DDHIG+A AG AD R L + R + Y P+ + L ++ D Q TQ RP+GV LL+ G++ LY PSG +E++A +IG+ + +LE F + + T ++ I+ AL AI T T + V E F L + ++ +++ D+ TE+ Sbjct: 10 YDRGITIFSPDGRLYQVEYAREAVKRGTASIGVRTPEGVVLAADKRSRSPLMEPTSVEKIHKADDHIGIASAGHVADARQLIDFARHQSQVNRLRYGEPIGIETLTKEVTDHIQQYTQVGGARPFGVALLIGGVENGTPRLYETDPSGTPYEWKAVSIGADRGDHQEHLEENFRD--DLTLDEGIELALEAIASTSDEGTAPDGVDVATVSAETERFVELSNDEIESYLEANDLLATED 246
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA7_CHICK (Proteasome subunit alpha type-7 OS=Gallus gallus GN=PSMA7 PE=2 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.214e-31 Identity = 84/233 (36.05%), Postives = 132/233 (56.65%), Query Frame = 2 Query: 35 YDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGA-HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ--GETLKSSICTVAVVGAGEPFHIL-DQETVQKLI 715 YD +T +SP G LFQVEYA EAVK+GS A+G+R K VVLG K+ ++L + +KI +DD++ +A AGLTAD R++ R EC ++ T E P+ V + +A Q TQ +RP+G+ L+ G D G LY PSG Y ++A AIG +++ + E+ + + + T + IK + A+ E +Q G+ ++ +AV+ +P IL E ++K + Sbjct: 3 YDRAITVFSPDGHLFQVEYAQEAVKKGSTAVGVRGKDIVVLGVEKKSVAKLQDERTVRKICALDDNVCMAFAGLTADARIVINRARVECQSHRLTVEDPVTVEYITRYIASLKQRYTQSKRRRPFGISALIVGFDFDGTPRLYQTDPSGTYHAWKANAIGRGAKSVRVEFEKNYTDEAIETDDLTIKLVIKALLEVVQSGGKNIE-----LAVMRRDQPLKILTSPEEIEKYV 230
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA4_YEAST (Proteasome component Y13 OS=Saccharomyces cerevisiae GN=PRE9 PE=1 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.214e-31 Identity = 84/241 (34.85%), Postives = 129/241 (53.53%), Query Frame = 2 Query: 20 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSEL---SSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEK-GAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEPFHILDQETVQKLIDSFDI 730 M +YD+ T +SP GRL+QVEYA+E++ AIG+ + +VL K S L + +K++K++D I VA+AGLTAD +L R NY TY +PV LV +L+D Q TQ RP+GV + AG D++ G LY + PSGNY ++A ++G+ + AA+T L+ +++ + +D I+ AL + +T L A + G D E QK+ +I Sbjct: 1 MGSRRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQDTSTEKLYKLNDKIAVAVAGLTADAEILINTARIHAQNYLKTYNEDIPVEILVRRLSDIKQGYTQHGGLRPFGVSFIYAGYDDRYGYQLYTSNPSGNYTGWKAISVGANTSAAQTLLQMDYKD--DMKVDDAIELALKTLSKTTDSSALTYDRLEFATIRKGAN----DGEVYQKIFKPQEI 235
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA2_XENLA (Proteasome subunit alpha type-2 OS=Xenopus laevis GN=psma2 PE=2 SV=2) HSP 1 Score: 135.961 bits (341), Expect = 2.214e-31 Identity = 76/210 (36.19%), Postives = 118/210 (56.19%), Query Frame = 2 Query: 20 MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQK--KIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSI 643 M Y +TT+SP+G+L Q+EYA+ AV G+ ++G+++ VVL K S L Q K+ + HIG+ +G+ D RVL R R Y Y+ P+P +LV ++A Q TQ RP+GV LL+AG DE +L+ + PSG YF ++A A+G KT+LE+R+ E ED I A++ ++E+ +G+ + +I Sbjct: 1 MAERGYSFSLTTFSPSGKLVQIEYALAAVAAGAPSVGIKATNGVVLATEKKQKSILYDEQSAHKVEPITKHIGMVYSGMGPDYRVLVRRARKLAQQYYLVYQEPIPTAQLVQRVASVMQEYTQSGGVRPFGVSLLIAGWDEGRPYLFQSDPSGAYFAWKATAMGKNYVNGKTFLEKRYNEDLE--LEDAIHTAILTLKESFEGQMTEDNI 208
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA7_SOLLC (Proteasome subunit alpha type-7 OS=Solanum lycopersicum GN=PAD1 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.892e-31 Identity = 79/212 (37.26%), Postives = 123/212 (58.02%), Query Frame = 2 Query: 32 QYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLGCVNKANSELSSHQ--KKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDEKGA--HLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQ--GETLKSSICT 649 +YD +T +SP G LFQVEYAMEAV++G+AA+G+R VVLG K+ +L + +KI +DDHI +A AGL AD RVL R EC ++ T E P+ V + +A Q TQ RP+G+ L+ G D LY PSG + ++A A G S + + +LE+ N+ E++ ++ +K A+ A+ E ++ G+ ++ ++ T Sbjct: 3 RYDRAITVFSPDGHLFQVEYAMEAVRKGNAAVGVRGTDTVVLGVEKKSTPKLQDSRSVRKIVNLDDHIALACAGLKADARVLVNKARIECQSHRLTVEDPVTVEYITRYIAGLQQKYTQSGGVRPFGLSTLIIGFDPHTGVPSLYQTDPSGTFSAWKANATGRNSNSTREFLEK---NYKETSGQETVKLAIRALLEVVESGGKNIEVAVMT 211
BLAST of CX675406 vs. ExPASy Swiss-Prot
Match: PSA6_SOYBN (Proteasome subunit alpha type-6 OS=Glycine max GN=PAA1 PE=2 SV=2) HSP 1 Score: 134.42 bits (337), Expect = 6.443e-31 Identity = 81/230 (35.22%), Postives = 130/230 (56.52%), Query Frame = 2 Query: 35 YDTDVTTWSPAGRLFQVEYAMEAVKQ-GSAAIGLRSKTHVVLGCVNKANSELSSHQK--KIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYSYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGL-DEKGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERRFENFSESTREDLIKDALMAIRETLQGETLKSSICTVAVVGAGEP-FHILDQETVQK 709 Y+ +T +SP GRLFQVEYA +AVK G +IG+R K + + K +L + +F + ++G+ G+TAD R L + R+E + +TY +PV L +ADK+QV TQ ++ RP GV +V G+ DE G LY P+G+YF ++A + G + Q A +LE++ +N T E+ ++ A+ A++ LQ E K++ V VV P F +L + + + Sbjct: 9 YNRHITIFSPEGRLFQVEYAFKAVKAAGITSIGVRGKDSICVVTHKKVPDKLLDNTSVTHLFPITKYLGLLATGMTADARTLVQQARNEAAEFRFTYGYEMPVDVLAKWIADKSQVYTQHAYMRPLGVVAMVLGIDDEYGPQLYKCDPAGHYFGHKATSAGLKDQEAINFLEKKMKNDPSFTYEETVQTAISALQSVLQ-EDFKATEIEVGVVRKDNPEFRVLTTDEIDE 237 The following BLAST results are available for this feature:
BLAST of CX675406 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 176
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Sequences
The
following sequences are available for this feature:
EST sequence >CX675406 ID=CX675406; Name=CX675406; organism=Citrus sinensis; type=EST; length=759bpback to top |