CX675404

Overview
NameCX675404
Unique NameCX675404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length674
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: TSA_ONCVO (Putative peroxiredoxin OS=Onchocerca volvulus GN=TSA PE=2 SV=1)

HSP 1 Score: 209.534 bits (532), Expect = 1.273e-53
Identity = 106/219 (48.40%), Postives = 139/219 (63.47%), Query Frame = 2
Query:   35 GDSVPNLQVQTNQGNFK-LHDFIG-DNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTP----GC----KVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGDXXXXXXXXXXDQAKETFPQGFETVDLPSKKEYLR 661
            G+  P+ Q +TN+G     +D+IG D+W I+FSHP DFTPVCTTEL ++    PEF KR VKL+GLSCD   SH++W  DI A       GC    K+ YPIIAD +R +  +L M+DPDE+D  G  L +R + I+G D  +KLS LYPA+TGRN DE++R +DSLQ      VATP +WK GD          ++AK+ F +   T+DLPS K YLR
Sbjct:    8 GNKFPDFQAETNEGFISSFYDWIGKDSWAILFSHPRDFTPVCTTELARLVQLAPEFKKRNVKLIGLSCDSADSHSKWADDILALYKMKCVGCDSEKKLPYPIIADEDRSLATELGMMDPDERDEKGNTLTARCVFIIGSDKTLKLSILYPATTGRNFDEILRVVDSLQLTAVKLVATPVDWKDGDDCVVLPTIDDNEAKKLFGEKIHTIDLPSGKHYLR 226          
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: PRDXL_DICDI (Peroxiredoxin-like protein DDB_G0282517, mitochondrial OS=Dictyostelium discoideum GN=DDB_G0282517 PE=3 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 1.276e-45
Identity = 93/214 (43.46%), Postives = 129/214 (60.28%), Query Frame = 2
Query:   26 LTIGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGDXXXXXXXXXXDQAKETFPQGFETVDLPSKKEYLRFT 667
            L IGD VP+    ++ G   L+  +GD+W +  SHP DFTP+CTTELG++A   PEF+KR  K+L LS D VK H EW+KDIE  T   K++YPIIAD +R++     M+ P+  ++       R++  + PD +++     PASTGRN +E++R LDS Q   K+KVATPA+W  GD          + AK+ FP+GF     P  K YLR T
Sbjct:   33 LRIGDVVPDFSQDSSVGQINLYKTLGDSWGLFVSHPKDFTPICTTELGRLAKLKPEFEKRNCKILALSVDSVKDHLEWMKDIEE-TQKVKINYPIIADQDRKVADLYGMIHPNADNT----FTVRSVFFISPDKRLRAQITLPASTGRNFNEIIRILDSFQLTDKYKVATPADWVDGDDCIIVPTVFDEDAKKLFPKGF-----PKIKSYLRVT 236          
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: PRX1_YEAST (Mitochondrial peroxiredoxin PRX1 OS=Saccharomyces cerevisiae GN=PRX1 PE=1 SV=1)

HSP 1 Score: 173.711 bits (439), Expect = 7.741e-43
Identity = 89/218 (40.83%), Postives = 122/218 (55.96%), Query Frame = 2
Query:   20 PGLTIGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPD--EKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGDXXXXXXXXXXDQAKETFPQGFETVDLPSKKEYLRFT 667
            P L I    PN    T  G    +D++GD+W ++FSHP DFTPVCTTE+   A   PEFDKR VKL+GLS +DV+SH +WI+DI+       V +PII D  R +    +MVD +  +  + G     R++ ++ P  +++L F YP++ GRN  EV+R +D+LQ   K  V TP NW+  D          D+AK  F Q  E       K YLRFT
Sbjct:   47 PRLRINSDAPNFDADTTVGKINFYDYLGDSWGVLFSHPADFTPVCTTEVSAFAKLKPEFDKRNVKLIGLSVEDVESHEKWIQDIKEIAKVKNVGFPIIGDTFRNVAFLYDMVDAEGFKNINDGSLKTVRSVFVIDPKKKIRLIFTYPSTVGRNTSEVLRVIDALQLTDKEGVVTPINWQPADDVIIPPSVSNDEAKAKFGQFNEI------KPYLRFT 258          
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: TDXH2_PICTO (Probable peroxiredoxin 2 OS=Picrophilus torridus GN=PTO0727 PE=3 SV=1)

HSP 1 Score: 144.05 bits (362), Expect = 6.568e-34
Identity = 72/200 (36.00%), Postives = 119/200 (59.50%), Query Frame = 2
Query:   32 IGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDI-EAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGDXXXXXXXXXXDQAKETFPQGFET 628
            +G   P+    T +G   L D+  + W ++FSHP DFTP+CTTE  + +    +F +  V+L+GLS D ++SH EW+KDI E +  G ++ +P+IAD N+EI ++ N++D    +++G  +  R + I+ P+  V+    YPA TGRN+DE++R++ +LQ     K+ATP NW+ GD          + A +   +G +T
Sbjct:    5 LGKRAPDFTANTTRGVISLSDY-KNKWVLLFSHPADFTPICTTEFIEFSRRYNDFKELNVELIGLSVDSLQSHIEWLKDIYEKF--GIEIQFPVIADINKEIAREYNLID----ENAGNTV--RGVFIIDPNQTVRWMIYYPAETGRNIDEILRSVKALQANWSRKIATPVNWRPGDKGILPPPSTLEDALQRIREGNKT 195          
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: TDXH2_THEAC (Probable peroxiredoxin 2 OS=Thermoplasma acidophilum GN=Ta0954 PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 3.260e-33
Identity = 73/175 (41.71%), Postives = 108/175 (61.71%), Query Frame = 2
Query:   32 IGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQG 556
            +G   P+  V T++G   L  + G  W ++FSHPGDFTPVCTTE         +F    V+LLGLS D V SH  WI+DI+ +  G ++ +PIIAD ++E+ +Q N++D    + SG  +  R + I+ P+  V+    YPA TGRN+DE++R + +LQ   + K+ATPANW+ G
Sbjct:    1 MGQKAPDFTVNTSKGPVTLSSYRG-KWVLLFSHPGDFTPVCTTEFIAFTERYKDFQALGVELLGLSIDSVYSHIAWIRDIKEHF-GIEIPFPIIADIDKEVARQYNLID----EKSGATV--RGVFIIDPNQIVRWMIYYPAETGRNIDEIIRVIKALQFNWERKLATPANWQPG 167          
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: TDXH_THEVO (Probable peroxiredoxin OS=Thermoplasma volcanium GN=TV1123 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 7.262e-33
Identity = 76/202 (37.62%), Postives = 116/202 (57.43%), Query Frame = 2
Query:   26 LTIGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGDXXXXXXXXXXDQA-KETFPQGFET 628
            + +G   P+  V T++G   L ++ G  W ++FSHPGDFTPVCTTE         +F K  V+L+GLS D V SH  WI+DI+ +  G  + +PIIAD ++E+ ++ N++D    + SG  +  R + I+ P+  V+    YPA TGRN++E++R + +LQ     K+ATPANW+ G           D + K    QG +T
Sbjct:    3 VVLGQKAPDFTVNTSKGPITLSNYRG-KWVLLFSHPGDFTPVCTTEFIAFTERYEDFQKLGVELIGLSIDSVFSHIAWIRDIKEHF-GIDIPFPIIADIDKEVAREYNLID----EKSGATV--RGVFIIDPNQIVRWMIYYPAETGRNIEEIIRVIKALQFNWDRKLATPANWQPGQEGIEPAPTTVDSSFKRDNEQGVKT 196          
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: TDXH_TREDE (Probable peroxiredoxin OS=Treponema denticola GN=TDE_0011 PE=3 SV=2)

HSP 1 Score: 138.658 bits (348), Expect = 2.760e-32
Identity = 73/172 (42.44%), Postives = 108/172 (62.79%), Query Frame = 2
Query:   32 IGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANW 547
            +GD  P L V T  G  KL   +  +W ++FSHP DFTPVCTTE       +PEF+K  VKL+GLS D ++SH +WI+ I+    G ++++P+IA  N  I  Q+ ++ P +  ++      RA+ IV P+ +V+L   YP   GRNM+E+VRA+ +LQ + K+KVA PA+W
Sbjct:    4 LGDDFPQLAVSTTHGPMKLPCDLKGSWFVLFSHPADFTPVCTTEFVAFQKLMPEFEKLGVKLIGLSIDQIQSHLKWIEWIKEKL-GVEITFPVIA-ANDSIANQIGLLHPGKGTNT-----VRAVFIVDPNGKVRLVLYYPQEIGRNMEEIVRAVKALQTSDKNKVALPADW 168          
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: TDXH_METMA (Probable peroxiredoxin OS=Methanosarcina mazei GN=MM_0814 PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.049e-31
Identity = 74/196 (37.76%), Postives = 100/196 (51.02%), Query Frame = 2
Query:   32 IGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAY-----TPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGDXXXXXXXXXXDQAKE 604
            IGD  P+    T QG  K  D     W I+FSHP DFTPVCTTE    A+   EF     +L+GLS D V SH  W+K IE           ++ +P+I D   ++ K+  MV P    +       RA+ I+ P+ +++    YP STGRNM E+ R + +LQK    KVATPANW+ G+          +  KE
Sbjct:    4 IGDDAPSFTAVTTQGIIKFPDDYKGKWVILFSHPADFTPVCTTEFMTFASMQEEFRSMNTELIGLSIDSVFSHIAWLKRIEEKIEYKGMKNLEIKFPVIEDLKMDVAKKYGMVQPKASTTQA----VRAVFIIDPEAKIRTILYYPQSTGRNMQEIKRIVVALQKNAAEKVATPANWQPGEDVIIPPPSSMEAVKE 195          
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: TDXH1_PICTO (Probable peroxiredoxin 1 OS=Picrophilus torridus GN=PTO0377 PE=3 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.051e-31
Identity = 73/182 (40.11%), Postives = 99/182 (54.40%), Query Frame = 2
Query:   14 KMPGLTIGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGD 559
            KMP   IG+  P ++V TN GN KL D     W ++FSHPGDFTPVCTTE    A +  +F K   +L+GLS D   SH EWI  I+       + +PIIADP   +  +L M+       +      RA+ IV     ++    YP  TGRN+ E++R + SLQ   K+K+ TPANW   +
Sbjct:    4 KMP--LIGEKFPEMEVVTNLGNIKLPDDFKGKWFVLFSHPGDFTPVCTTEFFSFAKHHDDFKKLNTELIGLSVDSKISHIEWINWIKQNLK-IDIKFPIIADPMGHVATKLGMIQAQSATQT-----VRAVFIVDDRSTIRAILYYPMETGRNISEILRLIKSLQMVDKYKIVTPANWPNNE 177          
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: TDXH_NANEQ (Probable peroxiredoxin OS=Nanoarchaeum equitans GN=NEQ191 PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.159e-30
Identity = 67/174 (38.51%), Postives = 102/174 (58.62%), Query Frame = 2
Query:   26 LTIGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANW 547
            + +G   P ++VQT  G  +L D     W ++FSHP DFTPVCTTE  + A    +F     +L+GLS D V SH +WI+ I+      ++ +P+IAD   E+ + L M+ P +  ++      RA+ IV P+  ++    YP  TGRN+ E++R +++LQ A K+ VATPANW
Sbjct:    2 VVLGQKFPEVEVQTTHGRMRLPDHYRGKWFVLFSHPADFTPVCTTEFVEFARNYDKFKAMNTELIGLSIDQVFSHIKWIEWIKEKF-NVEIPFPVIADDQGELARMLGMISPYKGTNT-----VRAVFIVDPEGYIRAMLYYPQETGRNIPEILRLVEALQTADKYGVATPANW 169          
The following BLAST results are available for this feature:
BLAST of CX675404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
TSA_ONCVO1.273e-5348.40Putative peroxiredoxin OS=Onchocerca volvulus GN=T... [more]
PRDXL_DICDI1.276e-4543.46Peroxiredoxin-like protein DDB_G0282517, mitochond... [more]
PRX1_YEAST7.741e-4340.83Mitochondrial peroxiredoxin PRX1 OS=Saccharomyces ... [more]
TDXH2_PICTO6.568e-3436.00Probable peroxiredoxin 2 OS=Picrophilus torridus G... [more]
TDXH2_THEAC3.260e-3341.71Probable peroxiredoxin 2 OS=Thermoplasma acidophil... [more]
TDXH_THEVO7.262e-3337.62Probable peroxiredoxin OS=Thermoplasma volcanium G... [more]
TDXH_TREDE2.760e-3242.44Probable peroxiredoxin OS=Treponema denticola GN=T... [more]
TDXH_METMA1.049e-3137.76Probable peroxiredoxin OS=Methanosarcina mazei GN=... [more]
TDXH1_PICTO3.051e-3140.11Probable peroxiredoxin 1 OS=Picrophilus torridus G... [more]
TDXH_NANEQ1.159e-3038.51Probable peroxiredoxin OS=Nanoarchaeum equitans GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_62A07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62A07-B14-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675404 ID=CX675404; Name=CX675404; organism=Citrus sinensis; type=EST; length=674bp
TCTCTTTGCTTTCAAAATGCCTGGCCTCACAATTGGAGATTCTGTTCCCA
ACCTTCAAGTCCAAACCAATCAAGGAAACTTTAAGCTTCATGACTTCATC
GGTGATAACTGGACCATTATCTTCTCTCACCCAGGTGATTTCACTCCTGT
GTGCACAACTGAACTTGGCAAGATGGCTGCTTATGTTCCAGAGTTTGATA
AGAGAGAAGTGAAGCTTCTGGGTTTGTCCTGTGATGACGTTAAGTCACAC
AATGAGTGGATCAAAGACATTGAAGCCTACACACCTGGTTGCAAGGTCTC
ATATCCAATCATCGCAGATCCCAATCGAGAGATCATCAAGCAACTCAACA
TGGTGGACCCGGATGAAAAAGATTCATCAGGAAAGCAGCTCCCTTCTCGA
GCCCTTCATATCGTGGGCCCTGATCATCAGGTGAAACTGAGCTTTCTTTA
CCCGGCGTCGACTGGCCGGAACATGGATGAAGTAGTAAGGGCATTGGACT
CTCTGCAGAAGGCACTGAAGCATAAGGTTGCAACGCCTGCAAACTGGAAG
CAGGGAGATCCGGTGGTGATATCACCAAGTGTGTCTAGTGATCAAGCCAA
AGAGACGTTCCCTCAAGGTTTTGAGACTGTGGATCTTCCATCCAAGAAAG
AGTACTTGCGTTTCACCAATGTCT
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