CX675404

Overview
NameCX675404
Unique NameCX675404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length674
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: TDXH_SULSO (Probable peroxiredoxin OS=Sulfolobus solfataricus GN=SSO2121 PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 1.514e-30
Identity = 73/176 (41.48%), Postives = 97/176 (55.11%), Query Frame = 2
Query:   32 IGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGD 559
            IG+  P ++V T QG  KL D     W ++FSHPGDFTPVCTTE    A    EF K   +L+GLS D   SH EWI  IE      ++ +PIIADP   + K+L M+      ++      RA+ +V     V+L   YP   GRN+DE++RA+ +LQ   K  V TPANW   +
Sbjct:    9 IGERFPEMEVITTQGRIKLPDDYKGRWFVLFSHPGDFTPVCTTEFYSFAKKYEEFKKLNTELIGLSVDSNISHIEWIMWIEKNLK-VEIPFPIIADPMGNVAKRLGMIHAQSSTAT-----VRAVFVVDDKGVVRLILYYPMEIGRNIDEILRAIRALQLVDKAGVVTPANWPNNE 178          
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: TDXH_AQUAE (Probable peroxiredoxin OS=Aquifex aeolicus GN=aq_858 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.583e-30
Identity = 69/172 (40.12%), Postives = 98/172 (56.98%), Query Frame = 2
Query:   32 IGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANW 547
            +G+  P  + QT  G  K  D     W ++FSHP DFTPVCTTE    A    EF KR V+L+GLS D   SH  W+ +I+    G ++ +PIIAD N E+ K+  M+ P +  +       RAL ++     ++    YP +TGRN+ EV+R +D+LQ A +  VATPA+W
Sbjct:    9 LGEPAPAFEAQTTFGPVKFPDDFKGQWVVLFSHPADFTPVCTTEFVAFAKNYEEFKKRNVQLIGLSVDSNFSHIAWVMNIKEKF-GIEIPFPIIADHNMEVAKKYGMIHPAQSTT----FTVRALFVIDDKGILRAMIYYPLTTGRNIREVIRLVDALQTADREGVATPADW 175          
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: TDXH2_SULTO (Probable peroxiredoxin 2 OS=Sulfolobus tokodaii GN=ST2442 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 2.583e-30
Identity = 71/176 (40.34%), Postives = 97/176 (55.11%), Query Frame = 2
Query:   32 IGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGD 559
            IG+  P ++V T  G  KL D+    W ++FSHPGDFTPVCTTE    A    EF K   +L+GLS D   SH EW+  IE      ++ +PIIADP   + K+L M+  +   S+      RA+ IV     V+L   YP   GRN+DE++R++ +LQ   K  V  PANW   +
Sbjct:    9 IGEKFPEMEVITTHGKIKLPDYYQGKWFVLFSHPGDFTPVCTTEFYSFAKKYEEFKKLNTELIGLSVDSNISHIEWVMWIEKNLK-VEIPFPIIADPMGNVAKRLGMIHAESSTST-----VRAVFIVDDKGIVRLIMYYPMEIGRNIDEILRSIRALQLVDKSGVVIPANWPNNE 178          
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: TDXH2_THETN (Probable peroxiredoxin 2 OS=Thermoanaerobacter tengcongensis GN=TTE2186 PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 9.815e-30
Identity = 69/175 (39.43%), Postives = 97/175 (55.43%), Query Frame = 2
Query:   32 IGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQG 556
            IG   P+ +  +  G  KL D+ G  W ++FSHPGDFTPVCTTE          F +R V+L+GLS D   SH  W+++I   T G ++ +PII D +  I K   M+ P E  +S      RA+ I+     ++L   YP   GRN+ E++R +D+LQ   K+KV  PANW  G
Sbjct:   17 IGAPAPDFKANSTFGPIKLSDYRG-KWVVLFSHPGDFTPVCTTEFIAFTQVYTSFVERNVQLIGLSVDSNPSHLAWVENIYK-TTGVEIPFPIIEDKDMRIAKLYGMISPAETSTSA----VRAVFIIDDKQILRLILYYPLEIGRNIQEIIRIIDALQTVDKYKVLAPANWYPG 185          
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: TDXH_IGNH4 (Probable peroxiredoxin OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=Igni_0459 PE=3 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.674e-29
Identity = 76/182 (41.76%), Postives = 103/182 (56.59%), Query Frame = 2
Query:   17 MPGLT--IGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSH---NEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANW 547
            MPG    IG+ +P + V T+ G  KL D     W +IFSHP DFTPVCTTE    A    +F K   +LLGLS D+  SH    EWIK+        ++ +PIIADP  ++  +L M+ P+     G  +  RA+ IV P+ +V+    YP + GRN+DE++R L +LQ   K   ATPANW
Sbjct:    1 MPGQIPLIGEKLPEMVVHTDHGPKKLPDDYKGKWLVIFSHPADFTPVCTTEFVAFAKRYEDFKKLNTELLGLSVDNSFSHIKWKEWIKE----KLNVEIPFPIIADPLGQVATKLGMLHPE-----GGVVTVRAVFIVDPEGKVRAILYYPLNVGRNIDEILRLLKALQVTDKLGRATPANW 173          
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: TDXH1_THEAC (Probable peroxiredoxin 1 OS=Thermoplasma acidophilum GN=Ta0473 PE=3 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 2.187e-29
Identity = 69/172 (40.12%), Postives = 96/172 (55.81%), Query Frame = 2
Query:   32 IGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANW 547
            IG+  P + V+T  G+ KL D     W ++FSHPGDFTPVCTTE    A    +F K    L+GLS D   SH EW+  I       +V +PII D    +  +L M+  +   S+      RA+ IV P+  V+L   YP   GRN+DE++RA+ +LQ + K++ A PANW
Sbjct:   10 IGEKFPEMTVETTHGSMKLPDQYKGRWFMLFSHPGDFTPVCTTEFYSFARRFEDFQKINTDLIGLSVDSTISHIEWVNWIRDNLK-IEVPFPIIGDSMGRVATRLGMIQAESSTST-----VRAVFIVDPNSTVRLIMYYPLEIGRNVDELLRAIKALQMSDKYRGAMPANW 175          
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: TDXH_HYPBU (Probable peroxiredoxin OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=Hbut_0228 PE=3 SV=1)

HSP 1 Score: 127.872 bits (320), Expect = 4.871e-29
Identity = 66/177 (37.29%), Postives = 98/177 (55.37%), Query Frame = 2
Query:   29 TIGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGD 559
            +IG+  P ++V T  G  KL D     W ++FSHP DFTPVCTTE    A    +F K   +L+GLS D   SH +W + I+    G ++ +PIIADP  E+ K+L ++      ++      RA+ +V     V+    YP   GRN+DE++R ++SLQ + K+  A PANW   +
Sbjct:    7 SIGEKFPEIEVMTTHGKIKLPDHFRGKWFVLFSHPADFTPVCTTEFVAFAKRYEDFKKLNTELIGLSVDSTFSHIKWAEWIKEKL-GVEIPFPIIADPTGEVAKKLGLLHAQSSTAT-----VRAVFVVDDKGVVRAILYYPQEVGRNIDEILRLIESLQISDKYGRAIPANWPNNE 177          
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: TDXH_THEP1 (Probable peroxiredoxin OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=Tpet_0121 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.085e-28
Identity = 67/176 (38.07%), Postives = 101/176 (57.39%), Query Frame = 2
Query:   32 IGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGD 559
            IG+  P L+V+T  G   L D     W ++FSHP DFTPVCTTE         EF K   +L+GLS D V SH +WI+ I+    G ++ +P+IAD   E+ ++L ++ P +  ++      RA+ IV P+  ++    YP   GRN+DE++RA+ +LQ + +  VA PANW   +
Sbjct:    8 IGEEFPRLEVKTTHGKKILPDDFRGKWFVLFSHPADFTPVCTTEFVAFQKRYDEFKKLNTELIGLSIDQVFSHIKWIEWIKEKL-GVEIEFPVIADDLGEVSRRLGLIHPSKGTNT-----VRAVFIVDPNGIIRAIVYYPQEVGRNIDEILRAVRALQTSDEKGVAIPANWPSNE 177          
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: TDXH_THEMA (Probable peroxiredoxin OS=Thermotoga maritima GN=TM_0807 PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.417e-28
Identity = 66/176 (37.50%), Postives = 102/176 (57.95%), Query Frame = 2
Query:   32 IGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGD 559
            IG+  P ++V+T  G   L D     W ++FSHP DFTPVCTTE         EF K   +L+GLS D V SH +WI+ I+    G ++ +P+IAD   E+ ++L ++ P++  ++      RA+ IV P+  ++    YP   GRN+DE++RA+ +LQ + +  VA PANW   +
Sbjct:    8 IGEEFPRVEVKTTHGKKVLPDDFRGKWFVLFSHPADFTPVCTTEFVAFQKRYDEFRKLNTELIGLSIDQVFSHIKWIEWIKEKL-GVEIEFPVIADDLGEVSRRLGLIHPNKGTNT-----VRAVFIVDPNGIIRAIVYYPQEVGRNIDEILRAVKALQTSDEKGVAIPANWPSNE 177          
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: TDXH_ARCFU (Probable peroxiredoxin OS=Archaeoglobus fulgidus GN=AF_0270 PE=3 SV=2)

HSP 1 Score: 126.331 bits (316), Expect = 1.417e-28
Identity = 65/176 (36.93%), Postives = 100/176 (56.82%), Query Frame = 2
Query:   32 IGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGD 559
            +GD+ P ++V T  G  KL +     W ++FSHP DFTPVCTTE         EF K   +L+GLS D V SH +WI+ I+      ++ +P+IAD    + + L ++ P +  ++      RA+ IV P+  ++    YP   GRNMDE++RA+ +LQ + ++ VA PANW   +
Sbjct:    5 LGDNFPEIEVVTTHGRMKLPEAFKGKWFVLFSHPADFTPVCTTEFVAFQNRYDEFRKLNCELIGLSIDQVFSHIKWIEWIKEKL-DIEIEFPVIADDTGRVAEMLGLIHPAKGTNT-----VRAVFIVDPEAVIRAVIYYPQELGRNMDEILRAVKALQVSDQNGVAMPANWPNNE 174          
The following BLAST results are available for this feature:
BLAST of CX675404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
TDXH_SULSO1.514e-3041.48Probable peroxiredoxin OS=Sulfolobus solfataricus ... [more]
TDXH_AQUAE2.583e-3040.12Probable peroxiredoxin OS=Aquifex aeolicus GN=aq_8... [more]
TDXH2_SULTO2.583e-3040.34Probable peroxiredoxin 2 OS=Sulfolobus tokodaii GN... [more]
TDXH2_THETN9.815e-3039.43Probable peroxiredoxin 2 OS=Thermoanaerobacter ten... [more]
TDXH_IGNH41.674e-2941.76Probable peroxiredoxin OS=Ignicoccus hospitalis (s... [more]
TDXH1_THEAC2.187e-2940.12Probable peroxiredoxin 1 OS=Thermoplasma acidophil... [more]
TDXH_HYPBU4.871e-2937.29Probable peroxiredoxin OS=Hyperthermus butylicus (... [more]
TDXH_THEP11.085e-2838.07Probable peroxiredoxin OS=Thermotoga petrophila (s... [more]
TDXH_THEMA1.417e-2837.50Probable peroxiredoxin OS=Thermotoga maritima GN=T... [more]
TDXH_ARCFU1.417e-2836.93Probable peroxiredoxin OS=Archaeoglobus fulgidus G... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_62A07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62A07-B14-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675404 ID=CX675404; Name=CX675404; organism=Citrus sinensis; type=EST; length=674bp
TCTCTTTGCTTTCAAAATGCCTGGCCTCACAATTGGAGATTCTGTTCCCA
ACCTTCAAGTCCAAACCAATCAAGGAAACTTTAAGCTTCATGACTTCATC
GGTGATAACTGGACCATTATCTTCTCTCACCCAGGTGATTTCACTCCTGT
GTGCACAACTGAACTTGGCAAGATGGCTGCTTATGTTCCAGAGTTTGATA
AGAGAGAAGTGAAGCTTCTGGGTTTGTCCTGTGATGACGTTAAGTCACAC
AATGAGTGGATCAAAGACATTGAAGCCTACACACCTGGTTGCAAGGTCTC
ATATCCAATCATCGCAGATCCCAATCGAGAGATCATCAAGCAACTCAACA
TGGTGGACCCGGATGAAAAAGATTCATCAGGAAAGCAGCTCCCTTCTCGA
GCCCTTCATATCGTGGGCCCTGATCATCAGGTGAAACTGAGCTTTCTTTA
CCCGGCGTCGACTGGCCGGAACATGGATGAAGTAGTAAGGGCATTGGACT
CTCTGCAGAAGGCACTGAAGCATAAGGTTGCAACGCCTGCAAACTGGAAG
CAGGGAGATCCGGTGGTGATATCACCAAGTGTGTCTAGTGATCAAGCCAA
AGAGACGTTCCCTCAAGGTTTTGAGACTGTGGATCTTCCATCCAAGAAAG
AGTACTTGCGTTTCACCAATGTCT
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