CX675404

Overview
NameCX675404
Unique NameCX675404
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length674
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: TDXH1_THETN (Probable peroxiredoxin 1 OS=Thermoanaerobacter tengcongensis GN=TTE0270 PE=3 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 3.157e-28
Identity = 65/172 (37.79%), Postives = 100/172 (58.14%), Query Frame = 2
Query:   32 IGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANW 547
            +G+  P+++V T  G  +L +     W ++FSHP DFTPVCTTE  + A    EF +   +L+GLS D V SH +W++ I+  T G ++ +P+IAD    +  QL M+ P +  ++      RA+ IV     ++L   YP   GRN+DE++RAL +LQ A ++ VA P  W
Sbjct:    4 LGEKFPSMEVMTTHGVKRLPEDYAGKWFVLFSHPADFTPVCTTEFVEFARKAEEFKQLNTELIGLSVDQVFSHIKWVEWIKDNT-GVQIPFPVIADELGRVSNQLGMIHPGKGTNT-----VRAVFIVDDKGVIRLIMYYPQEVGRNVDEILRALKALQTADQYGVALPEKW 169          
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: TDXH_METJA (Probable peroxiredoxin OS=Methanocaldococcus jannaschii GN=MJ0736 PE=3 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.200e-27
Identity = 66/178 (37.08%), Postives = 102/178 (57.30%), Query Frame = 2
Query:   32 IGDSVPNLQVQTNQGNFKLHDFIGDN--WTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGD 559
            IG+  P ++V+T  G  KL D+  +   W ++FSHP DFTPVCTTE         EF K   +L+GLS D V SH +W++ I+      ++ +PIIAD   E+ ++L M+ P + +++      RA+ +V     ++    YP   GRN+DE+VR + +LQ + +  VA PANW + D
Sbjct:    4 IGEKFPEVEVKTTHGAIKLPDYYVEKGKWFVLFSHPADFTPVCTTEFVGFQKRYDEFRKLNTELIGLSIDQVFSHLKWVEWIKEKL-NVEIEFPIIADDRGELAEKLGMISPYKGNNT-----VRAVFVVDNKGIIRAIIYYPQEVGRNLDEIVRLVKALQVSDEKGVAMPANWPEND 175          
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: TDXH_STAMF (Probable peroxiredoxin OS=Staphylothermus marinus (strain ATCC 43588 / DSM 3639 / F1) GN=Smar_0058 PE=3 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.047e-27
Identity = 65/183 (35.52%), Postives = 101/183 (55.19%), Query Frame = 2
Query:   17 MPGLT--IGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGD 559
            MPG    IG+  P ++V T  G  KL D+    + ++FSHP DFTPVCTTE    A    +F K   +L+GLS D   SH +WI+ I+    G ++ +PI+ADP   +  +L M+      ++      RA+ ++ P+  ++    YP   GRN+DE++R + ++Q   K+  ATPANW   +
Sbjct:    1 MPGTIPLIGEKFPEMEVVTQHGKIKLPDYFKGKYWVLFSHPADFTPVCTTEFVAFAKRYEDFKKLNTELIGLSVDSNFSHIKWIEWIKEKL-GVEIPFPIMADPRGTVASKLGML-----HAASSTHTVRAVFVIDPNGIIRAIIYYPLDNGRNIDEILRLVKAIQITDKYGRATPANWPNNE 177          
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: TDXH2_SULME (Probable peroxiredoxin 2 OS=Sulfolobus metallicus PE=3 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 4.559e-27
Identity = 71/187 (37.97%), Postives = 103/187 (55.08%), Query Frame = 2
Query:   47 PNLQVQTNQGNFKLH-DFIGDN-WTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDI-EAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGDXXXXXXXXXXDQA 598
            P  QV T QG    + D  G   W  +F+HP DFTPVCTTE  + +    +F    V+L+GLS D V SH EW+KDI E Y  G KV +P+IADP+++  + L++VD    ++SG+ +  R + +V PD  ++    YP   GR + E++R   ++    K KV  PANW+ G           D+A
Sbjct:    8 PETQVLTTQGVIDFYKDIFGKGKWLFLFAHPADFTPVCTTEFVEFSKAYNDFANLGVQLVGLSVDSVYSHIEWLKDIQEKY--GIKVPFPVIADPDKKFARLLDIVD----EASGQTI--RGVFLVSPDGVIRFIAYYPLEAGRKISELLRITKAMIVNYKAKVVLPANWEPGQDVIVPPPNVFDEA 186          
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: TDXH_METMP (Probable peroxiredoxin OS=Methanococcus maripaludis GN=MMP1174 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.777e-27
Identity = 68/180 (37.78%), Postives = 98/180 (54.44%), Query Frame = 2
Query:   26 LTIGDSVPNLQVQTNQGNFKL--HDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGD 559
            + IG+  P ++V T  G  KL  H      W ++FSHPGDFTPVCTTE         +F +   +L+GLS D V SH +W++ I+       + +PIIAD   E+  +L M+ P + +++      RA+ +V     ++    YP   GRNMDE+VR + +LQ A K   ATPANW   D
Sbjct:    2 VVIGEKFPEVEVTTTHGKLKLPEHYIESGKWFVLFSHPGDFTPVCTTEFVAFQKRYDQFRELNTELIGLSIDQVFSHIKWVEWIKEKL-DVDIEFPIIADDRGELAVKLGMISPYKGNNT-----VRAVFVVDATGTIRAIIYYPQEVGRNMDEIVRLVKALQTADK-GYATPANWPNND 174          
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: TDXH_METM5 (Probable peroxiredoxin OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=MmarC5_0413 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.777e-27
Identity = 69/180 (38.33%), Postives = 98/180 (54.44%), Query Frame = 2
Query:   26 LTIGDSVPNLQVQTNQGNFKL--HDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGD 559
            + IG+  P ++V T  G  KL  H      W ++FSHPGDFTPVCTTE         +F     +L+GLS D V SH +W++ I+       + +PIIAD   E+  +L M+ P + +++      RA+ +V     ++    YP   GRNMDEVVR + +LQ A K   ATPANW + D
Sbjct:    2 VVIGEKFPEVEVITTHGKLKLPEHYIEAGKWFVLFSHPGDFTPVCTTEFVAFQKRYDQFRSLNTELIGLSIDQVFSHIKWVEWIKEKL-DVDIEFPIIADDRGELAVKLGMISPYKGNNT-----VRAVFVVDATGTIRAIIYYPQEVGRNMDEVVRLVKALQTADK-GYATPANWPEND 174          
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: TDXH_CHLTE (Probable peroxiredoxin OS=Chlorobium tepidum GN=CT1747 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.777e-27
Identity = 66/172 (38.37%), Postives = 100/172 (58.14%), Query Frame = 2
Query:   32 IGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANW 547
            +GD  P L+VQT  G   +   +  +W ++FSHP DFTPVCTTE       V  F+K   KL+G+S D V SH +W++ I+       +++PI+A  N  I  +L M+ P +  ++      RA+ +  P+ +V+L   YP   GRNMDE++RA+  LQ +  +KVA PA+W
Sbjct:    4 LGDDFPELKVQTTHGPMNIPGDLKGSWFVLFSHPADFTPVCTTEFVAFQQRVEAFEKIGCKLIGMSVDQVFSHIKWVEWIKE-NLDVDITFPIVA-ANDRIANKLGMLHPGKGTNT-----VRAVFVGDPNGKVRLVLYYPQEIGRNMDEILRAVKVLQISDSNKVAMPADW 168          
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: TDXH1_SULTO (Probable peroxiredoxin 1 OS=Sulfolobus tokodaii GN=ST0584 PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 7.777e-27
Identity = 68/187 (36.36%), Postives = 104/187 (55.61%), Query Frame = 2
Query:   47 PNLQVQTNQGNFKLH-DFIGDN-WTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGDXXXXXXXXXXDQAK 601
            P++QV T +G    + D  G   W  +F+HP DFTPVCTTE    +    EF K  V+L+GLS D + SH +W+ DIE    G KV +P+IADP++++ + L+ +D    ++SG+ +  R + +  PD  ++    YP   GRN+DE++R   +     K KV  PANW+ G           D+A+
Sbjct:    9 PDVQVLTTKGPIDFYKDIFGKGKWLFLFAHPADFTPVCTTEFVAFSQKYEEFKKLGVELVGLSVDSIYSHIQWLMDIE-QRYGVKVPFPVIADPDKKLARMLDALD----EASGQTI--RIVVLASPDGIIRFVAQYPMEFGRNIDELLRITKAAIVNYKAKVVLPANWQPGQDVIVPPPAIFDEAE 188          
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: TDXH_PYRHO (Probable peroxiredoxin OS=Pyrococcus horikoshii GN=PH1217 PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.467e-25
Identity = 65/180 (36.11%), Postives = 100/180 (55.56%), Query Frame = 2
Query:   26 LTIGDSVPNLQVQTNQGNFKLHDFIGDN--WTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGD 559
            + IG+  P ++V+T  G  KL D+      W I+FSHP DFTPVCTTE   M   V EF K  V+ +GLS D V SH +WI+ I+      ++ +P+IAD   E+ ++L M+       SG  + +RA+ +V     ++    YPA  GR+ DE++R + +L+ + +  VA P  W   +
Sbjct:    2 VVIGEKFPEVEVKTTHGVIKLPDYFTKQGKWFILFSHPADFTPVCTTEFYGMQKRVEEFRKLGVEPIGLSVDQVFSHIKWIEWIKD-NLSVEIDFPVIADDRGELAEKLGMI------PSGATITARAVFVVDDKGIIRAIVYYPAEVGRDWDEILRLVKALKISTEKGVALPHKWPNNE 174          
BLAST of CX675404 vs. ExPASy Swiss-Prot
Match: TDXH_METTH (Probable peroxiredoxin OS=Methanobacterium thermoautotrophicum GN=MTH_159 PE=3 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 1.915e-25
Identity = 64/172 (37.21%), Postives = 93/172 (54.07%), Query Frame = 2
Query:   32 IGDSVPNLQVQTNQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKMAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANW 547
            IGD  P ++VQT  G  +L D     W I+FSHP DFTPVCTTE        PE  + + +L+GLS D V SH +WI+ I A     ++ +P+IAD  R +   L ++ P    ++      RA+ +V P+  ++    YP   GRN+ E+VR + + +      VA PANW
Sbjct:    4 IGDKFPEMEVQTTHGPMELPDEFEGKWFILFSHPADFTPVCTTEFVAFQEVYPELRELDCELVGLSVDQVFSHIKWIEWI-AENLDTEIEFPVIADTGR-VADTLGLIHPARPTNT-----VRAVFVVDPEGIIRAILYYPQELGRNIPEIVRMIRAFRVIDAEGVAAPANW 168          
The following BLAST results are available for this feature:
BLAST of CX675404 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
TDXH1_THETN3.157e-2837.79Probable peroxiredoxin 1 OS=Thermoanaerobacter ten... [more]
TDXH_METJA1.200e-2737.08Probable peroxiredoxin OS=Methanocaldococcus janna... [more]
TDXH_STAMF2.047e-2735.52Probable peroxiredoxin OS=Staphylothermus marinus ... [more]
TDXH2_SULME4.559e-2737.97Probable peroxiredoxin 2 OS=Sulfolobus metallicus ... [more]
TDXH_METMP7.777e-2737.78Probable peroxiredoxin OS=Methanococcus maripaludi... [more]
TDXH_METM57.777e-2738.33Probable peroxiredoxin OS=Methanococcus maripaludi... [more]
TDXH_CHLTE7.777e-2738.37Probable peroxiredoxin OS=Chlorobium tepidum GN=CT... [more]
TDXH1_SULTO7.777e-2736.36Probable peroxiredoxin 1 OS=Sulfolobus tokodaii GN... [more]
TDXH_PYRHO1.467e-2536.11Probable peroxiredoxin OS=Pyrococcus horikoshii GN... [more]
TDXH_METTH1.915e-2537.21Probable peroxiredoxin OS=Methanobacterium thermoa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_62A07_g Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62A07-B14-1-5.g, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675404 ID=CX675404; Name=CX675404; organism=Citrus sinensis; type=EST; length=674bp
TCTCTTTGCTTTCAAAATGCCTGGCCTCACAATTGGAGATTCTGTTCCCA
ACCTTCAAGTCCAAACCAATCAAGGAAACTTTAAGCTTCATGACTTCATC
GGTGATAACTGGACCATTATCTTCTCTCACCCAGGTGATTTCACTCCTGT
GTGCACAACTGAACTTGGCAAGATGGCTGCTTATGTTCCAGAGTTTGATA
AGAGAGAAGTGAAGCTTCTGGGTTTGTCCTGTGATGACGTTAAGTCACAC
AATGAGTGGATCAAAGACATTGAAGCCTACACACCTGGTTGCAAGGTCTC
ATATCCAATCATCGCAGATCCCAATCGAGAGATCATCAAGCAACTCAACA
TGGTGGACCCGGATGAAAAAGATTCATCAGGAAAGCAGCTCCCTTCTCGA
GCCCTTCATATCGTGGGCCCTGATCATCAGGTGAAACTGAGCTTTCTTTA
CCCGGCGTCGACTGGCCGGAACATGGATGAAGTAGTAAGGGCATTGGACT
CTCTGCAGAAGGCACTGAAGCATAAGGTTGCAACGCCTGCAAACTGGAAG
CAGGGAGATCCGGTGGTGATATCACCAAGTGTGTCTAGTGATCAAGCCAA
AGAGACGTTCCCTCAAGGTTTTGAGACTGTGGATCTTCCATCCAAGAAAG
AGTACTTGCGTTTCACCAATGTCT
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