CX675403

Overview
NameCX675403
Unique NameCX675403
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4345 contig Csv1_Contig4345:1..758. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX675403 vs. ExPASy Swiss-Prot
Match: TSA_ONCVO (Putative peroxiredoxin OS=Onchocerca volvulus GN=TSA PE=2 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 1.022e-52
Identity = 106/219 (48.40%), Postives = 138/219 (63.01%), Query Frame = -3
Query:  109 GDCVPNFQVQTTQGNFK-LHDFIG-DNWTIIFSHPGDFTPVCTTELGKRAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTP----GC----KVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGDXXXXXXXXXSDQAKETFPQGFETVDLPSKKEYLR 735
            G+  P+FQ +T +G     +D+IG D+W I+FSHP DFTPVCTTEL +     PEF KR VKL+GLSCD   SH++W  DI A       GC    K+ YPIIAD +R +  +L M+DPDE+D  G  L +R + I+G D  +KLS LYPA+TGRN DE++R +DSLQ      VATP +WK GD          ++AK+ F +   T+DLPS K YLR
Sbjct:    8 GNKFPDFQAETNEGFISSFYDWIGKDSWAILFSHPRDFTPVCTTELARLVQLAPEFKKRNVKLIGLSCDSADSHSKWADDILALYKMKCVGCDSEKKLPYPIIADEDRSLATELGMMDPDERDEKGNTLTARCVFIIGSDKTLKLSILYPATTGRNFDEILRVVDSLQLTAVKLVATPVDWKDGDDCVVLPTIDDNEAKKLFGEKIHTIDLPSGKHYLR 226          
BLAST of CX675403 vs. ExPASy Swiss-Prot
Match: PRDXL_DICDI (Peroxiredoxin-like protein DDB_G0282517, mitochondrial OS=Dictyostelium discoideum GN=DDB_G0282517 PE=3 SV=1)

HSP 1 Score: 184.111 bits (466), Expect = 7.091e-46
Identity = 94/214 (43.93%), Postives = 129/214 (60.28%), Query Frame = -3
Query:  103 LTIGDCVPNFQVQTTQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKRAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGDXXXXXXXXXSDQAKETFPQGFETVDLPSKKEYLRFT 744
            L IGD VP+F   ++ G   L+  +GD+W +  SHP DFTP+CTTELG+ A   PEF+KR  K+L LS D VK H EW+KDIE  T   K++YPIIAD +R++     M+ P+  ++       R++  + PD +++     PASTGRN +E++R LDS Q   K+KVATPA+W  GD          + AK+ FP+GF     P  K YLR T
Sbjct:   33 LRIGDVVPDFSQDSSVGQINLYKTLGDSWGLFVSHPKDFTPICTTELGRLAKLKPEFEKRNCKILALSVDSVKDHLEWMKDIEE-TQKVKINYPIIADQDRKVADLYGMIHPNADNT----FTVRSVFFISPDKRLRAQITLPASTGRNFNEIIRILDSFQLTDKYKVATPADWVDGDDCIIVPTVFDEDAKKLFPKGF-----PKIKSYLRVT 236          
BLAST of CX675403 vs. ExPASy Swiss-Prot
Match: PRX1_YEAST (Mitochondrial peroxiredoxin PRX1 OS=Saccharomyces cerevisiae GN=PRX1 PE=1 SV=1)

HSP 1 Score: 175.637 bits (444), Expect = 2.522e-43
Identity = 91/218 (41.74%), Postives = 125/218 (57.34%), Query Frame = -3
Query:  103 PGLTIGDCVPNFQVQTTQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKRAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPD--EKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGDXXXXXXXXXSDQAKETFPQGFETVDLPSKKEYLRFT 750
            P L I    PNF   TT G    +D++GD+W ++FSHP DFTPVCTTE+   A   PEFDKR VKL+GLS +DV+SH +WI+DI+       V +PII D  R +    +MVD +  +  + G     R++ ++ P  +++L F YP++ GRN  EV+R +D+LQ   K  V TP NW+  D         +D+AK  F Q  E       K YLRFT
Sbjct:   47 PRLRINSDAPNFDADTTVGKINFYDYLGDSWGVLFSHPADFTPVCTTEVSAFAKLKPEFDKRNVKLIGLSVEDVESHEKWIQDIKEIAKVKNVGFPIIGDTFRNVAFLYDMVDAEGFKNINDGSLKTVRSVFVIDPKKKIRLIFTYPSTVGRNTSEVLRVIDALQLTDKEGVVTPINWQPADDVIIPPSVSNDEAKAKFGQFNEI------KPYLRFT 258          
BLAST of CX675403 vs. ExPASy Swiss-Prot
Match: TDXH2_PICTO (Probable peroxiredoxin 2 OS=Picrophilus torridus GN=PTO0727 PE=3 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 1.638e-34
Identity = 74/200 (37.00%), Postives = 121/200 (60.50%), Query Frame = -3
Query:  142 IGDCVPNFQVQTTQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKRAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDI-EAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGDXXXXXXXXXSDQAKETFPQGFET 738
            +G   P+F   TT+G   L D+  + W ++FSHP DFTP+CTTE  + +    +F +  V+L+GLS D ++SH EW+KDI E +  G ++ +P+IAD N+EI ++ N++D    +++G  +  R + I+ P+  V+    YPA TGRN+DE++R++ +LQ     K+ATP NW+ GD          + A +   +G +T
Sbjct:    5 LGKRAPDFTANTTRGVISLSDY-KNKWVLLFSHPADFTPICTTEFIEFSRRYNDFKELNVELIGLSVDSLQSHIEWLKDIYEKF--GIEIQFPVIADINKEIAREYNLID----ENAGNTV--RGVFIIDPNQTVRWMIYYPAETGRNIDEILRSVKALQANWSRKIATPVNWRPGDKGILPPPSTLEDALQRIREGNKT 195          
BLAST of CX675403 vs. ExPASy Swiss-Prot
Match: TDXH2_THEAC (Probable peroxiredoxin 2 OS=Thermoplasma acidophilum GN=Ta0954 PE=3 SV=1)

HSP 1 Score: 141.739 bits (356), Expect = 4.036e-33
Identity = 74/175 (42.29%), Postives = 109/175 (62.29%), Query Frame = -3
Query:  214 IGDCVPNFQVQTTQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKRAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQG 738
            +G   P+F V T++G   L  + G  W ++FSHPGDFTPVCTTE         +F    V+LLGLS D V SH  WI+DI+ +  G ++ +PIIAD ++E+ +Q N++D    + SG  +  R + I+ P+  V+    YPA TGRN+DE++R + +LQ   + K+ATPANW+ G
Sbjct:    1 MGQKAPDFTVNTSKGPVTLSSYRG-KWVLLFSHPGDFTPVCTTEFIAFTERYKDFQALGVELLGLSIDSVYSHIAWIRDIKEHF-GIEIPFPIIADIDKEVARQYNLID----EKSGATV--RGVFIIDPNQIVRWMIYYPAETGRNIDEIIRVIKALQFNWERKLATPANWQPG 167          
BLAST of CX675403 vs. ExPASy Swiss-Prot
Match: TDXH_THEVO (Probable peroxiredoxin OS=Thermoplasma volcanium GN=TV1123 PE=3 SV=1)

HSP 1 Score: 140.584 bits (353), Expect = 8.991e-33
Identity = 77/202 (38.12%), Postives = 117/202 (57.92%), Query Frame = -3
Query:  142 LTIGDCVPNFQVQTTQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKRAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGDXXXXXXXXXSDQA-KETFPQGFET 744
            + +G   P+F V T++G   L ++ G  W ++FSHPGDFTPVCTTE         +F K  V+L+GLS D V SH  WI+DI+ +  G  + +PIIAD ++E+ ++ N++D    + SG  +  R + I+ P+  V+    YPA TGRN++E++R + +LQ     K+ATPANW+ G           D + K    QG +T
Sbjct:    3 VVLGQKAPDFTVNTSKGPITLSNYRG-KWVLLFSHPGDFTPVCTTEFIAFTERYEDFQKLGVELIGLSIDSVFSHIAWIRDIKEHF-GIDIPFPIIADIDKEVAREYNLID----EKSGATV--RGVFIIDPNQIVRWMIYYPAETGRNIEEIIRVIKALQFNWDRKLATPANWQPGQEGIEPAPTTVDSSFKRDNEQGVKT 196          
BLAST of CX675403 vs. ExPASy Swiss-Prot
Match: TDXH_METMA (Probable peroxiredoxin OS=Methanosarcina mazei GN=MM_0814 PE=3 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 3.416e-32
Identity = 76/196 (38.78%), Postives = 102/196 (52.04%), Query Frame = -3
Query:  166 IGDCVPNFQVQTTQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKRAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAY-----TPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGDXXXXXXXXXSDQAKE 738
            IGD  P+F   TTQG  K  D     W I+FSHP DFTPVCTTE    A+   EF     +L+GLS D V SH  W+K IE           ++ +P+I D   ++ K+  MV P    +       RA+ I+ P+ +++    YP STGRNM E+ R + +LQK    KVATPANW+ G+          +  KE
Sbjct:    4 IGDDAPSFTAVTTQGIIKFPDDYKGKWVILFSHPADFTPVCTTEFMTFASMQEEFRSMNTELIGLSIDSVFSHIAWLKRIEEKIEYKGMKNLEIKFPVIEDLKMDVAKKYGMVQPKASTTQA----VRAVFIIDPEAKIRTILYYPQSTGRNMQEIKRIVVALQKNAAEKVATPANWQPGEDVIIPPPSSMEAVKE 195          
BLAST of CX675403 vs. ExPASy Swiss-Prot
Match: TDXH_TREDE (Probable peroxiredoxin OS=Treponema denticola GN=TDE_0011 PE=3 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 1.298e-31
Identity = 73/172 (42.44%), Postives = 108/172 (62.79%), Query Frame = -3
Query:  223 IGDCVPNFQVQTTQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKRAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANW 738
            +GD  P   V TT G  KL   +  +W ++FSHP DFTPVCTTE       +PEF+K  VKL+GLS D ++SH +WI+ I+    G ++++P+IA  N  I  Q+ ++ P +  ++      RA+ IV P+ +V+L   YP   GRNM+E+VRA+ +LQ + K+KVA PA+W
Sbjct:    4 LGDDFPQLAVSTTHGPMKLPCDLKGSWFVLFSHPADFTPVCTTEFVAFQKLMPEFEKLGVKLIGLSIDQIQSHLKWIEWIKEKL-GVEITFPVIA-ANDSIANQIGLLHPGKGTNT-----VRAVFIVDPNGKVRLVLYYPQEIGRNMEEIVRAVKALQTSDKNKVALPADW 168          
BLAST of CX675403 vs. ExPASy Swiss-Prot
Match: TDXH_AQUAE (Probable peroxiredoxin OS=Aquifex aeolicus GN=aq_858 PE=3 SV=1)

HSP 1 Score: 134.42 bits (337), Expect = 6.443e-31
Identity = 71/172 (41.28%), Postives = 100/172 (58.14%), Query Frame = -3
Query:  223 IGDCVPNFQVQTTQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKRAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANW 738
            +G+  P F+ QTT G  K  D     W ++FSHP DFTPVCTTE    A    EF KR V+L+GLS D   SH  W+ +I+    G ++ +PIIAD N E+ K+  M+ P +  +       RAL ++     ++    YP +TGRN+ EV+R +D+LQ A +  VATPA+W
Sbjct:    9 LGEPAPAFEAQTTFGPVKFPDDFKGQWVVLFSHPADFTPVCTTEFVAFAKNYEEFKKRNVQLIGLSVDSNFSHIAWVMNIKEKF-GIEIPFPIIADHNMEVAKKYGMIHPAQSTT----FTVRALFVIDDKGILRAMIYYPLTTGRNIREVIRLVDALQTADREGVATPADW 175          
BLAST of CX675403 vs. ExPASy Swiss-Prot
Match: TDXH2_THETN (Probable peroxiredoxin 2 OS=Thermoanaerobacter tengcongensis GN=TTE2186 PE=3 SV=1)

HSP 1 Score: 132.494 bits (332), Expect = 2.448e-30
Identity = 71/175 (40.57%), Postives = 99/175 (56.57%), Query Frame = -3
Query:  214 IGDCVPNFQVQTTQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKRAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQG 738
            IG   P+F+  +T G  KL D+ G  W ++FSHPGDFTPVCTTE          F +R V+L+GLS D   SH  W+++I   T G ++ +PII D +  I K   M+ P E  +S      RA+ I+     ++L   YP   GRN+ E++R +D+LQ   K+KV  PANW  G
Sbjct:   17 IGAPAPDFKANSTFGPIKLSDYRG-KWVVLFSHPGDFTPVCTTEFIAFTQVYTSFVERNVQLIGLSVDSNPSHLAWVENIYK-TTGVEIPFPIIEDKDMRIAKLYGMISPAETSTSA----VRAVFIIDDKQILRLILYYPLEIGRNIQEIIRIIDALQTVDKYKVLAPANWYPG 185          
The following BLAST results are available for this feature:
BLAST of CX675403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
TSA_ONCVO1.022e-5248.40Putative peroxiredoxin OS=Onchocerca volvulus GN=T... [more]
PRDXL_DICDI7.091e-4643.93Peroxiredoxin-like protein DDB_G0282517, mitochond... [more]
PRX1_YEAST2.522e-4341.74Mitochondrial peroxiredoxin PRX1 OS=Saccharomyces ... [more]
TDXH2_PICTO1.638e-3437.00Probable peroxiredoxin 2 OS=Picrophilus torridus G... [more]
TDXH2_THEAC4.036e-3342.29Probable peroxiredoxin 2 OS=Thermoplasma acidophil... [more]
TDXH_THEVO8.991e-3338.12Probable peroxiredoxin OS=Thermoplasma volcanium G... [more]
TDXH_METMA3.416e-3238.78Probable peroxiredoxin OS=Methanosarcina mazei GN=... [more]
TDXH_TREDE1.298e-3142.44Probable peroxiredoxin OS=Treponema denticola GN=T... [more]
TDXH_AQUAE6.443e-3141.28Probable peroxiredoxin OS=Aquifex aeolicus GN=aq_8... [more]
TDXH2_THETN2.448e-3040.57Probable peroxiredoxin 2 OS=Thermoanaerobacter ten... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_62A07_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62A07-B14-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675403 ID=CX675403; Name=CX675403; organism=Citrus sinensis; type=EST; length=758bp
TTTTTTTTTATTGTATAATATATCAACGAACGTATATGACATGCATGGTC
AACTATTTATCTATTGCTTAGCTAAATGGAAACTGGTGAAGCTTTAGACA
TTGGTGAAACGCAAGTACTCTTTCTTGGATGGAAGATCCACAGTCTCAAA
ACCTTGAGGGAACGTCTCTTTGGCTTGATCACTAGACACACTTGGTGATA
TCACCACCGGATCTCCCTGCTTCCAGTTTGCAGGCGTTGCAACCTTATGC
TTCAGTGCCTTCTGCAGAGAGTCCAATGCCCTTACTACTTCATCCATGTT
CCGGCCAGTCGACGCCGGGTAAAGAAAGCTCAGTTTCACCTGATGATCAG
GGCCCACGATATGAAGGGCTCGAGAAGGGAGCTGCTTTCCTGATGAATCT
TTTTCATCCGGGTCCACCATGTTGAGTTGCTTGATGATCTCTCGATTGGG
ATCTGCGATGATCGGATATGAGACCTTGCAACCAGGTGTGTAGGCTTCAA
TGTCTTTGATCCACTCATTGTGTGACTTAACGTCATCACAGGACAAACCC
AGAAGCTTCACTTCTCTCTTATCAAACTCTGGAACATAAGCTGCCCTCTT
GCCAAGTTCAGTTGTGCACACAGGAGTGAAATCACCTGGGTGAGAGAAGA
TAATGGTCCAGTTATCACCGATGAAGTCATGAAGCTTAAAGTTTCCTTGA
GTGGTTTGGACTTGAAAGTTGGGAACACAATCTCCAATTGTGAGGCCAGG
CATTTTGA
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