CX675403

Overview
NameCX675403
Unique NameCX675403
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length758
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4345 contig Csv1_Contig4345:1..758. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX675403 vs. ExPASy Swiss-Prot
Match: TDXH_SULSO (Probable peroxiredoxin OS=Sulfolobus solfataricus GN=SSO2121 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.198e-30
Identity = 74/176 (42.05%), Postives = 97/176 (55.11%), Query Frame = -3
Query:  211 IGDCVPNFQVQTTQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKRAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGD 738
            IG+  P  +V TTQG  KL D     W ++FSHPGDFTPVCTTE    A    EF K   +L+GLS D   SH EWI  IE      ++ +PIIADP   + K+L M+      ++      RA+ +V     V+L   YP   GRN+DE++RA+ +LQ   K  V TPANW   +
Sbjct:    9 IGERFPEMEVITTQGRIKLPDDYKGRWFVLFSHPGDFTPVCTTEFYSFAKKYEEFKKLNTELIGLSVDSNISHIEWIMWIEKNLK-VEIPFPIIADPMGNVAKRLGMIHAQSSTAT-----VRAVFVVDDKGVVRLILYYPMEIGRNIDEILRAIRALQLVDKAGVVTPANWPNNE 178          
BLAST of CX675403 vs. ExPASy Swiss-Prot
Match: TDXH_NANEQ (Probable peroxiredoxin OS=Nanoarchaeum equitans GN=NEQ191 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.198e-30
Identity = 68/174 (39.08%), Postives = 102/174 (58.62%), Query Frame = -3
Query:  223 LTIGDCVPNFQVQTTQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKRAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANW 744
            + +G   P  +VQTT G  +L D     W ++FSHP DFTPVCTTE  + A    +F     +L+GLS D V SH +WI+ I+      ++ +P+IAD   E+ + L M+ P +  ++      RA+ IV P+  ++    YP  TGRN+ E++R +++LQ A K+ VATPANW
Sbjct:    2 VVLGQKFPEVEVQTTHGRMRLPDHYRGKWFVLFSHPADFTPVCTTEFVEFARNYDKFKAMNTELIGLSIDQVFSHIKWIEWIKEKF-NVEIPFPVIADDQGELARMLGMISPYKGTNT-----VRAVFIVDPEGYIRAMLYYPQETGRNIPEILRLVEALQTADKYGVATPANW 169          
BLAST of CX675403 vs. ExPASy Swiss-Prot
Match: TDXH2_SULTO (Probable peroxiredoxin 2 OS=Sulfolobus tokodaii GN=ST2442 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.124e-30
Identity = 72/176 (40.91%), Postives = 97/176 (55.11%), Query Frame = -3
Query:  211 IGDCVPNFQVQTTQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKRAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGD 738
            IG+  P  +V TT G  KL D+    W ++FSHPGDFTPVCTTE    A    EF K   +L+GLS D   SH EW+  IE      ++ +PIIADP   + K+L M+  +   S+      RA+ IV     V+L   YP   GRN+DE++R++ +LQ   K  V  PANW   +
Sbjct:    9 IGEKFPEMEVITTHGKIKLPDYYQGKWFVLFSHPGDFTPVCTTEFYSFAKKYEEFKKLNTELIGLSVDSNISHIEWVMWIEKNLK-VEIPFPIIADPMGNVAKRLGMIHAESSTST-----VRAVFIVDDKGIVRLIMYYPMEIGRNIDEILRSIRALQLVDKSGVVIPANWPNNE 178          
BLAST of CX675403 vs. ExPASy Swiss-Prot
Match: TDXH1_PICTO (Probable peroxiredoxin 1 OS=Picrophilus torridus GN=PTO0377 PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.587e-29
Identity = 72/182 (39.56%), Postives = 97/182 (53.30%), Query Frame = -3
Query:  211 KMPGLTIGDCVPNFQVQTTQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKRAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGD 756
            KMP   IG+  P  +V T  GN KL D     W ++FSHPGDFTPVCTTE    A +  +F K   +L+GLS D   SH EWI  I+       + +PIIADP   +  +L M+       +      RA+ IV     ++    YP  TGRN+ E++R + SLQ   K+K+ TPANW   +
Sbjct:    4 KMP--LIGEKFPEMEVVTNLGNIKLPDDFKGKWFVLFSHPGDFTPVCTTEFFSFAKHHDDFKKLNTELIGLSVDSKISHIEWINWIKQNLK-IDIKFPIIADPMGHVATKLGMIQAQSATQT-----VRAVFIVDDRSTIRAILYYPMETGRNISEILRLIKSLQMVDKYKIVTPANWPNNE 177          
BLAST of CX675403 vs. ExPASy Swiss-Prot
Match: TDXH1_THEAC (Probable peroxiredoxin 1 OS=Thermoplasma acidophilum GN=Ta0473 PE=3 SV=2)

HSP 1 Score: 127.872 bits (320), Expect = 6.031e-29
Identity = 70/172 (40.70%), Postives = 96/172 (55.81%), Query Frame = -3
Query:  223 IGDCVPNFQVQTTQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKRAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANW 738
            IG+  P   V+TT G+ KL D     W ++FSHPGDFTPVCTTE    A    +F K    L+GLS D   SH EW+  I       +V +PII D    +  +L M+  +   S+      RA+ IV P+  V+L   YP   GRN+DE++RA+ +LQ + K++ A PANW
Sbjct:   10 IGEKFPEMTVETTHGSMKLPDQYKGRWFMLFSHPGDFTPVCTTEFYSFARRFEDFQKINTDLIGLSVDSTISHIEWVNWIRDNLK-IEVPFPIIGDSMGRVATRLGMIQAESSTST-----VRAVFIVDPNSTVRLIMYYPLEIGRNVDELLRAIKALQMSDKYRGAMPANW 175          
BLAST of CX675403 vs. ExPASy Swiss-Prot
Match: TDXH_HYPBU (Probable peroxiredoxin OS=Hyperthermus butylicus (strain DSM 5456 / JCM 9403) GN=Hbut_0228 PE=3 SV=1)

HSP 1 Score: 126.716 bits (317), Expect = 1.343e-28
Identity = 67/177 (37.85%), Postives = 98/177 (55.37%), Query Frame = -3
Query:  211 TIGDCVPNFQVQTTQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKRAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGD 741
            +IG+  P  +V TT G  KL D     W ++FSHP DFTPVCTTE    A    +F K   +L+GLS D   SH +W + I+    G ++ +PIIADP  E+ K+L ++      ++      RA+ +V     V+    YP   GRN+DE++R ++SLQ + K+  A PANW   +
Sbjct:    7 SIGEKFPEIEVMTTHGKIKLPDHFRGKWFVLFSHPADFTPVCTTEFVAFAKRYEDFKKLNTELIGLSVDSTFSHIKWAEWIKEKL-GVEIPFPIIADPTGEVAKKLGLLHAQSSTAT-----VRAVFVVDDKGVVRAILYYPQEVGRNIDEILRLIESLQISDKYGRAIPANWPNNE 177          
BLAST of CX675403 vs. ExPASy Swiss-Prot
Match: TDXH_IGNH4 (Probable peroxiredoxin OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=Igni_0459 PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 2.993e-28
Identity = 76/182 (41.76%), Postives = 101/182 (55.49%), Query Frame = -3
Query:  223 MPGLT--IGDCVPNFQVQTTQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKRAAYVPEFDKREVKLLGLSCDDVKSH---NEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANW 753
            MPG    IG+ +P   V T  G  KL D     W +IFSHP DFTPVCTTE    A    +F K   +LLGLS D+  SH    EWIK+        ++ +PIIADP  ++  +L M+ P+     G  +  RA+ IV P+ +V+    YP + GRN+DE++R L +LQ   K   ATPANW
Sbjct:    1 MPGQIPLIGEKLPEMVVHTDHGPKKLPDDYKGKWLVIFSHPADFTPVCTTEFVAFAKRYEDFKKLNTELLGLSVDNSFSHIKWKEWIKE----KLNVEIPFPIIADPLGQVATKLGMLHPE-----GGVVTVRAVFIVDPEGKVRAILYYPLNVGRNIDEILRLLKALQVTDKLGRATPANW 173          
BLAST of CX675403 vs. ExPASy Swiss-Prot
Match: TDXH_THEMA (Probable peroxiredoxin OS=Thermotoga maritima GN=TM_0807 PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.105e-28
Identity = 67/176 (38.07%), Postives = 102/176 (57.95%), Query Frame = -3
Query:  211 IGDCVPNFQVQTTQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKRAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGD 738
            IG+  P  +V+TT G   L D     W ++FSHP DFTPVCTTE         EF K   +L+GLS D V SH +WI+ I+    G ++ +P+IAD   E+ ++L ++ P++  ++      RA+ IV P+  ++    YP   GRN+DE++RA+ +LQ + +  VA PANW   +
Sbjct:    8 IGEEFPRVEVKTTHGKKVLPDDFRGKWFVLFSHPADFTPVCTTEFVAFQKRYDEFRKLNTELIGLSIDQVFSHIKWIEWIKEKL-GVEIEFPVIADDLGEVSRRLGLIHPNKGTNT-----VRAVFIVDPNGIIRAIVYYPQEVGRNIDEILRAVKALQTSDEKGVAIPANWPSNE 177          
BLAST of CX675403 vs. ExPASy Swiss-Prot
Match: TDXH_ARCFU (Probable peroxiredoxin OS=Archaeoglobus fulgidus GN=AF_0270 PE=3 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 5.105e-28
Identity = 66/176 (37.50%), Postives = 99/176 (56.25%), Query Frame = -3
Query:  211 IGDCVPNFQVQTTQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKRAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGD 738
            +GD  P  +V TT G  KL +     W ++FSHP DFTPVCTTE         EF K   +L+GLS D V SH +WI+ I+      ++ +P+IAD    + + L ++ P +  ++      RA+ IV P+  ++    YP   GRNMDE++RA+ +LQ + ++ VA PANW   +
Sbjct:    5 LGDNFPEIEVVTTHGRMKLPEAFKGKWFVLFSHPADFTPVCTTEFVAFQNRYDEFRKLNCELIGLSIDQVFSHIKWIEWIKEKL-DIEIEFPVIADDTGRVAEMLGLIHPAKGTNT-----VRAVFIVDPEAVIRAVIYYPQELGRNMDEILRAVKALQVSDQNGVAMPANWPNNE 174          
BLAST of CX675403 vs. ExPASy Swiss-Prot
Match: TDXH_THEP1 (Probable peroxiredoxin OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=Tpet_0121 PE=3 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.668e-28
Identity = 67/176 (38.07%), Postives = 101/176 (57.39%), Query Frame = -3
Query:  211 IGDCVPNFQVQTTQGNFKLHDFIGDNWTIIFSHPGDFTPVCTTELGKRAAYVPEFDKREVKLLGLSCDDVKSHNEWIKDIEAYTPGCKVSYPIIADPNREIIKQLNMVDPDEKDSSGKQLPSRALHIVGPDHQVKLSFLYPASTGRNMDEVVRALDSLQKALKHKVATPANWKQGD 738
            IG+  P  +V+TT G   L D     W ++FSHP DFTPVCTTE         EF K   +L+GLS D V SH +WI+ I+    G ++ +P+IAD   E+ ++L ++ P +  ++      RA+ IV P+  ++    YP   GRN+DE++RA+ +LQ + +  VA PANW   +
Sbjct:    8 IGEEFPRLEVKTTHGKKILPDDFRGKWFVLFSHPADFTPVCTTEFVAFQKRYDEFKKLNTELIGLSIDQVFSHIKWIEWIKEKL-GVEIEFPVIADDLGEVSRRLGLIHPSKGTNT-----VRAVFIVDPNGIIRAIVYYPQEVGRNIDEILRAVRALQTSDEKGVAIPANWPSNE 177          
The following BLAST results are available for this feature:
BLAST of CX675403 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 97
Match NameE-valueIdentityDescription
TDXH_SULSO3.198e-3042.05Probable peroxiredoxin OS=Sulfolobus solfataricus ... [more]
TDXH_NANEQ3.198e-3039.08Probable peroxiredoxin OS=Nanoarchaeum equitans GN... [more]
TDXH2_SULTO7.124e-3040.91Probable peroxiredoxin 2 OS=Sulfolobus tokodaii GN... [more]
TDXH1_PICTO1.587e-2939.56Probable peroxiredoxin 1 OS=Picrophilus torridus G... [more]
TDXH1_THEAC6.031e-2940.70Probable peroxiredoxin 1 OS=Thermoplasma acidophil... [more]
TDXH_HYPBU1.343e-2837.85Probable peroxiredoxin OS=Hyperthermus butylicus (... [more]
TDXH_IGNH42.993e-2841.76Probable peroxiredoxin OS=Ignicoccus hospitalis (s... [more]
TDXH_THEMA5.105e-2838.07Probable peroxiredoxin OS=Thermotoga maritima GN=T... [more]
TDXH_ARCFU5.105e-2837.50Probable peroxiredoxin OS=Archaeoglobus fulgidus G... [more]
TDXH_THEP16.668e-2838.07Probable peroxiredoxin OS=Thermotoga petrophila (s... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_62A07_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62A07-B14-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675403 ID=CX675403; Name=CX675403; organism=Citrus sinensis; type=EST; length=758bp
TTTTTTTTTATTGTATAATATATCAACGAACGTATATGACATGCATGGTC
AACTATTTATCTATTGCTTAGCTAAATGGAAACTGGTGAAGCTTTAGACA
TTGGTGAAACGCAAGTACTCTTTCTTGGATGGAAGATCCACAGTCTCAAA
ACCTTGAGGGAACGTCTCTTTGGCTTGATCACTAGACACACTTGGTGATA
TCACCACCGGATCTCCCTGCTTCCAGTTTGCAGGCGTTGCAACCTTATGC
TTCAGTGCCTTCTGCAGAGAGTCCAATGCCCTTACTACTTCATCCATGTT
CCGGCCAGTCGACGCCGGGTAAAGAAAGCTCAGTTTCACCTGATGATCAG
GGCCCACGATATGAAGGGCTCGAGAAGGGAGCTGCTTTCCTGATGAATCT
TTTTCATCCGGGTCCACCATGTTGAGTTGCTTGATGATCTCTCGATTGGG
ATCTGCGATGATCGGATATGAGACCTTGCAACCAGGTGTGTAGGCTTCAA
TGTCTTTGATCCACTCATTGTGTGACTTAACGTCATCACAGGACAAACCC
AGAAGCTTCACTTCTCTCTTATCAAACTCTGGAACATAAGCTGCCCTCTT
GCCAAGTTCAGTTGTGCACACAGGAGTGAAATCACCTGGGTGAGAGAAGA
TAATGGTCCAGTTATCACCGATGAAGTCATGAAGCTTAAAGTTTCCTTGA
GTGGTTTGGACTTGAAAGTTGGGAACACAATCTCCAATTGTGAGGCCAGG
CATTTTGA
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