CX675400

Overview
NameCX675400
Unique NameCX675400
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5497 contig Csv1_Contig5497:1..809. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIFC1_HUMAN (Kinesin-like protein KIFC1 OS=Homo sapiens GN=KIFC1 PE=1 SV=2)

HSP 1 Score: 157.532 bits (397), Expect = 7.898e-38
Identity = 91/162 (56.17%), Postives = 110/162 (67.90%), Query Frame = -3
Query:  328 VDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATG----DRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIG 801
            V V    E+ +LL  A Q+R+V +T  NE SSRSH VF L+I G + +   Q    L+L+DLAGSERL    A G    +RL+ETQAIN SLS+L  VI AL+ KE H+PYRNSKLTYLLQ  LG  +K LMFVNISP   +V ESL SLRFA++VN C IG
Sbjct:  505 VPVSCEKEVDALLHLARQNRAVARTAQNERSSRSHSVFQLQISGEHSSRGLQCGAPLSLVDLAGSERLDPGLALGPGERERLRETQAINSSLSTLGLVIMALSNKESHVPYRNSKLTYLLQNSLGGSAKMLMFVNISPLEENVSESLNSLRFASKVNQCVIG 666          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIFC1_MOUSE (Kinesin-like protein KIFC1 OS=Mus musculus GN=Kifc1 PE=1 SV=2)

HSP 1 Score: 156.377 bits (394), Expect = 1.759e-37
Identity = 92/162 (56.79%), Postives = 108/162 (66.67%), Query Frame = -3
Query:  328 VDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATG----DRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIG 801
            V V    E+ +LL  A Q+R+V  T  N+ SSRSH VF L+I G + A   Q    LNL+DLAGSERL      G    DRL+ETQAIN SLS+L  VI AL+ KE H+PYRNSKLTYLLQ  LG  +K LMFVNISP   +V ESL SLRFA++VN C IG
Sbjct:  506 VPVSCEKEVEALLHLAHQNRAVAHTAQNKRSSRSHSVFQLQISGEHAARGLQCGAPLNLVDLAGSERLDPGLHLGPGERDRLRETQAINSSLSTLGLVIMALSNKESHVPYRNSKLTYLLQNSLGGSAKMLMFVNISPLEENVSESLNSLRFASKVNQCVIG 667          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIFC3_MOUSE (Kinesin-like protein KIFC3 OS=Mus musculus GN=Kifc3 PE=1 SV=4)

HSP 1 Score: 154.066 bits (388), Expect = 8.732e-37
Identity = 83/174 (47.70%), Postives = 116/174 (66.67%), Query Frame = -3
Query:  286 TIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQLTLKAADSR 807
            T   V S+ +I+ +      +R+   T +NE+SSRSH +  + + GV+ +T  +  G LNL+DLAGSER+ +SGA G+RL+E Q IN+SLS+L DVI AL  ++ H+P+RNSKLTYLLQ  L  DSKTLM V +SP   +  E+L SLRFA RV + E+G  SR+  L +  S+
Sbjct:  610 TEFQVQSVDDINKVFEFGYNNRTTEFTNLNEHSSRSHALLIVTVRGVDCSTGLRTTGKLNLVDLAGSERVGKSGAEGNRLREAQHINRSLSALGDVIAALRSRQGHVPFRNSKLTYLLQDSLSGDSKTLMVVQVSPVEKNTSETLYSLRFAERVRSVELGPGSRRTELGSWSSQ 783          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KAR3_YEAST (Kinesin-like protein KAR3 OS=Saccharomyces cerevisiae GN=KAR3 PE=1 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 1.140e-36
Identity = 83/152 (54.61%), Postives = 105/152 (69.08%), Query Frame = -3
Query:  331 ISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKED---HIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEI 777
            +  +L++A + RS   T  NE+SSRSH +F + + G N  T     G LNL+DLAGSER++ S   GDRL+ETQ INKSLS L DVI AL + +    HIP+RNSKLTYLLQ  L  DSKTLMFVNISP S  + E+L SLRFA++VN+  +
Sbjct:  574 VEIILKKANKLRSTASTASNEHSSRSHSIFIIHLSGSNAKTGAHSYGTLNLVDLAGSERINVSQVVGDRLRETQNINKSLSCLGDVIHALGQPDSTKRHIPFRNSKLTYLLQYSLTGDSKTLMFVNISPSSSHINETLNSLRFASKVNSTRL 725          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: ATK4_ARATH (Kinesin-4 OS=Arabidopsis thaliana GN=ATK4 PE=1 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 2.541e-36
Identity = 78/160 (48.75%), Postives = 112/160 (70.00%), Query Frame = -3
Query:  328 TIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIG 807
            ++V V S  ++  L+     +R+V  T MN+ SSRSH   T+ + G +  +   + G ++L+DLAGSER+ +S  TGDRLKE Q INKSLS+L DVI +L++K  H+PYRNSKLT LLQ  LG  +KTLMFV+ISP+  ++GE++ +L+FA RV + E+G
Sbjct:  565 SLVPVSSTDDVIQLMDLGHMNRAVSSTAMNDRSSRSHSCVTVHVQGRDLTSGSILHGSMHLVDLAGSERVDKSEVTGDRLKEAQHINKSLSALGDVISSLSQKTSHVPYRNSKLTQLLQDSLGGSAKTLMFVHISPEPDTLGETISTLKFAERVGSVELG 724          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIFC3_HUMAN (Kinesin-like protein KIFC3 OS=Homo sapiens GN=KIFC3 PE=1 SV=3)

HSP 1 Score: 150.984 bits (380), Expect = 7.392e-36
Identity = 82/174 (47.13%), Postives = 114/174 (65.52%), Query Frame = -3
Query:  286 TIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQLTLKAADSR 807
            T   V S+ +I+ +      +R+   T +NE+SSRSH +  + + GV+ +T  +  G LNL+DLAGSER+ +SGA G RL+E Q INKSLS+L DVI AL  ++ H+P+RNSKLTYLLQ  L  DSKTLM V +SP   +  E+L SL+FA RV + E+G   R+  L +  S+
Sbjct:  612 TEFQVQSVDDINKVFEFGHTNRTTEFTNLNEHSSRSHALLIVTVRGVDCSTGLRTTGKLNLVDLAGSERVGKSGAEGSRLREAQHINKSLSALGDVIAALRSRQGHVPFRNSKLTYLLQDSLSGDSKTLMVVQVSPVEKNTSETLYSLKFAERVRSVELGPGLRRAELGSWSSQ 785          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KLP68_DROPS (Kinesin-like protein Klp68D OS=Drosophila pseudoobscura pseudoobscura GN=Klp68D PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 4.958e-32
Identity = 72/152 (47.37%), Postives = 105/152 (69.08%), Query Frame = -3
Query:  334 SISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACE 789
            S+ ++  +++   ++R+VG T MNE+SSRSH +F ++I   +  T     G LNLIDLAGSER S++GA+ +RLKE   IN +LSSL +VI ALA+   H+PYR+SKLT LLQ  LG +SKT+M  NI P + +  E+L +LR+A+R  + +
Sbjct:  194 SVDDMIRVMKVGNKNRTVGFTNMNEHSSRSHAIFMIKIEMCDTETNTIKVGKLNLIDLAGSERQSKTGASAERLKEASKINLALSSLGNVISALAESSPHVPYRDSKLTRLLQDSLGGNSKTIMIANIGPSNYNYNETLTTLRYASRAKSIQ 345          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KLP68_DROME (Kinesin-like protein Klp68D OS=Drosophila melanogaster GN=Klp68D PE=2 SV=2)

HSP 1 Score: 138.272 bits (347), Expect = 4.958e-32
Identity = 72/152 (47.37%), Postives = 105/152 (69.08%), Query Frame = -3
Query:  334 SISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACE 789
            S+ ++  +++   ++R+VG T MNE+SSRSH +F ++I   +  T     G LNLIDLAGSER S++GA+ +RLKE   IN +LSSL +VI ALA+   H+PYR+SKLT LLQ  LG +SKT+M  NI P + +  E+L +LR+A+R  + +
Sbjct:  194 SVEDMIKVMQVGNKNRTVGFTNMNEHSSRSHAIFMIKIEMCDTETNTIKVGKLNLIDLAGSERQSKTGASAERLKEASKINLALSSLGNVISALAESSPHVPYRDSKLTRLLQDSLGGNSKTIMIANIGPSNYNYNETLTTLRYASRAKSIQ 345          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: NCD_DROME (Protein claret segregational OS=Drosophila melanogaster GN=ncd PE=1 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 8.458e-32
Identity = 75/151 (49.67%), Postives = 101/151 (66.89%), Query Frame = -3
Query:  331 SEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEI 783
            + +  L+  A  +R+   T  NE SSRSH V  L + G +   ++   G +NL+DLAGSE    S  T  R+ ET+ IN+SLS L++VI AL +K+DHIPYRNSKLT+LL P LG +SKTLMF+N+SP      ES+ SLRFAA VN+C++
Sbjct:  526 NHLRHLMHTAKMNRATASTAGNERSSRSHAVTKLELIGRHAEKQEISVGSINLVDLAGSE----SPKTSTRMTETKNINRSLSELTNVILALLQKQDHIPYRNSKLTHLLMPSLGGNSKTLMFINVSPFQDCFQESVKSLRFAASVNSCKM 672          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KLP3_CAEEL (Kinesin-like protein klp-3 OS=Caenorhabditis elegans GN=klp-3 PE=1 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 4.198e-31
Identity = 69/152 (45.39%), Postives = 102/152 (67.11%), Query Frame = -3
Query:  346 VDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARV 801
            V V S  E++  L +  ++++V  T+ N  SSRSH +  + +   N  T+    G LNL+DLAGSER+S++ ATG  LKE QAINKSLS L +V+ AL + + HIP+RN +LT +L+  L  DSKTL+ V++SPD+ S+ ES+ S+ FA ++
Sbjct:  411 VSVNSAEEVTETLARGRKNKAVAATEANIESSRSHVIVRVLVSATNLITKATTVGRLNLVDLAGSERVSQTNATGQLLKEAQAINKSLSELGNVVLALRQNQKHIPFRNCQLTRILEDSLNGDSKTLVIVHLSPDAKSLNESISSVNFAEKI 562          
The following BLAST results are available for this feature:
BLAST of CX675400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
KIFC1_HUMAN7.898e-3856.17Kinesin-like protein KIFC1 OS=Homo sapiens GN=KIFC... [more]
KIFC1_MOUSE1.759e-3756.79Kinesin-like protein KIFC1 OS=Mus musculus GN=Kifc... [more]
KIFC3_MOUSE8.732e-3747.70Kinesin-like protein KIFC3 OS=Mus musculus GN=Kifc... [more]
KAR3_YEAST1.140e-3654.61Kinesin-like protein KAR3 OS=Saccharomyces cerevis... [more]
ATK4_ARATH2.541e-3648.75Kinesin-4 OS=Arabidopsis thaliana GN=ATK4 PE=1 SV=... [more]
KIFC3_HUMAN7.392e-3647.13Kinesin-like protein KIFC3 OS=Homo sapiens GN=KIFC... [more]
KLP68_DROPS4.958e-3247.37Kinesin-like protein Klp68D OS=Drosophila pseudoob... [more]
KLP68_DROME4.958e-3247.37Kinesin-like protein Klp68D OS=Drosophila melanoga... [more]
NCD_DROME8.458e-3249.67Protein claret segregational OS=Drosophila melanog... [more]
KLP3_CAEEL4.198e-3145.39Kinesin-like protein klp-3 OS=Caenorhabditis elega... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_62A05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62A05-B10-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675400 ID=CX675400; Name=CX675400; organism=Citrus sinensis; type=EST; length=809bp
TTTTTTTTTAACAGAGTGAAAAGGACTCAATTTCACTATCAATAAAAGTA
CATATTACAGAAATTGCTTCCGCGGTTCTACCTTCAAATTGTATTCATCA
ACTGATGAACTTTGTCATACAACAAACAATAGTCACCTTTATAAGCCAAT
AAATTAACTATCATGCAATGAAAAGCAAAATTAAGATCCTATAATCTCAC
CATGACAACCCACTCCAGTGCATGTGGGACACAGTCATTATGAACATGAC
AAAGTAAACACGTCAGTATTTCAACCATAACTCAACCGAGAATCAGCAGC
CTTCAAAGTCAATTGGCGACTGGGAACCCCAATTTCGCAGGCATTGACTC
TCGCAGCAAACCGTAGAGAGCAAAGGGACTCACCAACGGACGGAGAATCA
GGCGAGATGTTAACAAACATTAAAGTTTTAGAATCTCTCCCAAGACACGG
CTGAAGAAGATATGTCAGCTTCGAGTTCCTATATGGAATATGATCCTCCT
TCTTTGCCAAGGCAAATATAACATCACTCAATGATGACAGGCTTTTATTT
ATGGCCTGAGTTTCTTTCAAACGGTCACCAGTCGCCCCACTTCTTGATAA
TCGCTCACTTCCAGCTAGATCAATGAGGTTTAAGACACCCTGTACTTGTT
GTTCAGTTGCTTCATTTACTCCAAATATTCGTAACGTGAAGACAAAATGG
CTTCTTGATGAATACTCATTCATTTGAGTCTTGCCCACAGACCTGCTCTG
TGCAGCCTGCCTTAAAAGCGATGAAATCTCTGATATGCTACAGACATCAA
CAATCGTAA
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