CX675400

Overview
NameCX675400
Unique NameCX675400
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIF1B_MOUSE (Kinesin-like protein KIF1B OS=Mus musculus GN=Kif1b PE=1 SV=2)

HSP 1 Score: 108.612 bits (270), Expect = 4.207e-23
Identity = 70/165 (42.42%), Postives = 96/165 (58.18%), Query Frame = -3
Query:  349 VCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQ----GVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA------------KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 795
            V S ++I+ L+    ++R+V  T MNE SSRSH VFT+      +  E  +       ++L+DLAGSER   +GA G RLKE   INKSL++L  VI ALA            KK D IPYR+S LT+LL+  LG +S+T M   +SP   +  E+L +LR+A R
Sbjct:  186 VTSYTDIADLMDAGNKARTVAATNMNETSSRSHAVFTIVFTQKKQDPETNLSTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEVDNCTSKSKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLRYADR 350          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KI21B_MOUSE (Kinesin-like protein KIF21B OS=Mus musculus GN=Kif21b PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.207e-23
Identity = 70/172 (40.70%), Postives = 97/172 (56.40%), Query Frame = -3
Query:  349 SISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTL-----RIFGVNEATEQQVQGV-----------------LNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFAL---AKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 789
            S  E+   L+Q A SR+   TQMN  SSRSH +FT+     R+    +   + V G+                  + +DLAGSERL R+GATG+R KE  +IN  L +L +VI AL   +KK  H+PYR+SKLT LLQ  LG +S+T+M   +SP      E+L +L++A R
Sbjct:  196 SQEELIQCLKQGALSRTTASTQMNVQSSRSHAIFTIHLCQMRVCAQPDLVNETVTGLPDGAAPTGTEYETLTAKFHFVDLAGSERLKRTGATGERAKEGISINCGLLALGNVISALGDQSKKVVHVPYRDSKLTRLLQDSLGGNSQTIMIACVSPSDRDFMETLNTLKYANR 367          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KI15B_XENLA (Kinesin-like protein KIF15-B OS=Xenopus laevis GN=kif15-B PE=1 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 4.207e-23
Identity = 67/155 (43.23%), Postives = 91/155 (58.71%), Query Frame = -3
Query:  349 VCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATE--QQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK----KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 795
            V S +E   +L    ++R V  T MN  SSRSH VFT+ I  + +  +        LNL+DLAGSER   +   G RLKE  +IN+SLS L  VI AL      ++ HI YR+SKLT+LL+  LG ++KT +  N+ P S   GE+L +L+FA R
Sbjct:  206 VTSAAEAYQVLSMGWRNRRVASTSMNRESSRSHAVFTVTIESMEKTNDIVNIRSSQLNLVDLAGSERQKDTQTEGVRLKEAGSINRSLSCLGQVITALVDVANGRQRHICYRDSKLTFLLRDSLGGNAKTFIIANVHPGSKCFGETLSTLQFAQR 360          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIF1B_HUMAN (Kinesin-like protein KIF1B OS=Homo sapiens GN=KIF1B PE=1 SV=5)

HSP 1 Score: 108.227 bits (269), Expect = 5.495e-23
Identity = 70/165 (42.42%), Postives = 95/165 (57.58%), Query Frame = -3
Query:  349 VCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQ----GVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA------------KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 795
            V S ++I+ L+    ++R+V  T MNE SSRSH VFT+         E  +       ++L+DLAGSER   +GA G RLKE   INKSL++L  VI ALA            KK D IPYR+S LT+LL+  LG +S+T M   +SP   +  E+L +LR+A R
Sbjct:  186 VTSYTDIADLMDAGNKARTVAATNMNETSSRSHAVFTIVFTQKKHDNETNLSTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEVDNCTSKSKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLRYADR 350          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KI15A_XENLA (Kinesin-like protein KIF15-A OS=Xenopus laevis GN=kif15-A PE=1 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 5.495e-23
Identity = 70/156 (44.87%), Postives = 91/156 (58.33%), Query Frame = -3
Query:  349 VCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQ---GVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK----KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 795
            V S +E   +L    ++R V  T MN  SSRSH VFT+ I  + E T   V      LNL+DLAGSER   +   G RLKE  +IN+SLS L  VI AL      ++ HI YR+SKLT+LL+  LG ++KT    N+ P S   GE+L +L+FA R
Sbjct:  206 VTSAAEAYQVLSMGWRNRRVASTSMNRESSRSHAVFTVTIESM-EKTNDLVNIRSSQLNLVDLAGSERQKDTQTEGVRLKEAGSINRSLSCLGQVITALVDVANGRQRHICYRDSKLTFLLRDSLGGNAKTFYIANVHPGSKCFGETLSTLQFAQR 360          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIF9_HUMAN (Kinesin-like protein KIF9 OS=Homo sapiens GN=KIF9 PE=1 SV=3)

HSP 1 Score: 107.842 bits (268), Expect = 7.177e-23
Identity = 62/145 (42.76%), Postives = 90/145 (62.07%), Query Frame = -3
Query:  346 SLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNE--ATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA-KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARV 771
            SLL +   +R +    MN+ SSRSH +FT+ +   +   + E+ +   +NL+DLAGSERL +SG+ G  LKE   INKSLS L   I AL  +K DHIP+R  KLT+ L+  LG +   ++  NI  ++  + E+L SLRFA+R+
Sbjct:  193 SLLFEGETNRIIASHTMNKNSSRSHCIFTIYLEAHSRTLSEEKYITSKINLVDLAGSERLGKSGSEGQVLKEATYINKSLSFLEQAIIALGDQKRDHIPFRQCKLTHALKDSLGGNCNMVLVTNIYGEAAQLEETLSSLRFASRM 337          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KI21A_HUMAN (Kinesin-like protein KIF21A OS=Homo sapiens GN=KIF21A PE=1 SV=2)

HSP 1 Score: 107.842 bits (268), Expect = 7.177e-23
Identity = 67/169 (39.64%), Postives = 96/169 (56.80%), Query Frame = -3
Query:  349 SEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRI--------FGVNEATEQQV-------------QGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFAL---AKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 783
            SE+   L+  A SR+   TQMN  SSRSH +FT+ +           + AT+ ++                 + +DLAGSERL R+GATG+R KE  +IN  L +L +VI AL   +K+  H+PYR+SKLT LLQ  LG +S+T+M   +SP      E+L +L++A R
Sbjct:  199 SEMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHVCQTRVCPQIDADNATDNKIISESAQMNEFETLTAKFHFVDLAGSERLKRTGATGERAKEGISINCGLLALGNVISALGDKSKRATHVPYRDSKLTRLLQDSLGGNSQTIMIACVSPSDRDFMETLNTLKYANR 367          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIF4_MOUSE (Chromosome-associated kinesin KIF4 OS=Mus musculus GN=Kif4 PE=2 SV=2)

HSP 1 Score: 107.457 bits (267), Expect = 9.373e-23
Identity = 67/148 (45.27%), Postives = 91/148 (61.49%), Query Frame = -3
Query:  349 SEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQ-VQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA--KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 783
            S+  S L Q   SR+V  T MN  SSRSH +FT+ I    +  +    +  L+L+DLAGSER  ++ A GDRL+E   IN+ L  L +VI AL   KK + +PYR+SKLT LLQ  LG +S TLM   +SP   ++ E+L +LR+A R
Sbjct:  186 SDTVSCLEQGNNSRTVASTAMNSQSSRSHAIFTISIEQRKKNDKNSSFRSKLHLVDLAGSERQKKTKAEGDRLREGININRGLLCLGNVISALGDDKKGNFVPYRDSKLTRLLQDSLGGNSHTLMIACVSPADSNLEETLNTLRYADR 333          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: UN104_CAEEL (Kinesin-like protein unc-104 OS=Caenorhabditis elegans GN=unc-104 PE=2 SV=3)

HSP 1 Score: 107.071 bits (266), Expect = 1.224e-22
Identity = 69/165 (41.82%), Postives = 99/165 (60.00%), Query Frame = -3
Query:  349 TIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQ----GVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA-----KKEDH---IPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 807
            T + VCS  +I +L+ +  ++R+V  T MN  SSRSH VFT+ +       +  +       ++L+DLAGSER + +GA G RLKE   INKSL++L  VI  LA     KK+ +   IPYR+S LT+LL+  LG +SKT M   +SP   +  E+L +LR+A R
Sbjct:  179 TKMAVCSYHDICNLMDEGNKARTVAATNMNSTSSRSHAVFTIVLTQKRHCADSNLDTEKHSKISLVDLAGSERANSTGAEGQRLKEGANINKSLTTLGLVISKLAEESTKKKKSNKGVIPYRDSVLTWLLRENLGGNSKTAMLAALSPADINFDETLSTLRYADR 343          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIF4A_HUMAN (Chromosome-associated kinesin KIF4A OS=Homo sapiens GN=KIF4A PE=1 SV=3)

HSP 1 Score: 107.071 bits (266), Expect = 1.224e-22
Identity = 66/144 (45.83%), Postives = 89/144 (61.81%), Query Frame = -3
Query:  349 SLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQ-VQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA--KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 771
            S L Q   SR+V  T MN  SSRSH +FT+ +    ++ +    +  L+L+DLAGSER  ++ A GDRLKE   IN+ L  L +VI AL   KK   +PYR+SKLT LLQ  LG +S TLM   +SP   ++ E+L +LR+A R
Sbjct:  189 SCLEQGNNSRTVASTAMNSQSSRSHAIFTISLEQRKKSDKNSSFRSKLHLVDLAGSERQKKTKAEGDRLKEGININRGLLCLGNVISALGDDKKGGFVPYRDSKLTRLLQDSLGGNSHTLMIACVSPADSNLEETLNTLRYADR 332          
The following BLAST results are available for this feature:
BLAST of CX675400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
KIF1B_MOUSE4.207e-2342.42Kinesin-like protein KIF1B OS=Mus musculus GN=Kif1... [more]
KI21B_MOUSE4.207e-2340.70Kinesin-like protein KIF21B OS=Mus musculus GN=Kif... [more]
KI15B_XENLA4.207e-2343.23Kinesin-like protein KIF15-B OS=Xenopus laevis GN=... [more]
KIF1B_HUMAN5.495e-2342.42Kinesin-like protein KIF1B OS=Homo sapiens GN=KIF1... [more]
KI15A_XENLA5.495e-2344.87Kinesin-like protein KIF15-A OS=Xenopus laevis GN=... [more]
KIF9_HUMAN7.177e-2342.76Kinesin-like protein KIF9 OS=Homo sapiens GN=KIF9 ... [more]
KI21A_HUMAN7.177e-2339.64Kinesin-like protein KIF21A OS=Homo sapiens GN=KIF... [more]
KIF4_MOUSE9.373e-2345.27Chromosome-associated kinesin KIF4 OS=Mus musculus... [more]
UN104_CAEEL1.224e-2241.82Kinesin-like protein unc-104 OS=Caenorhabditis ele... [more]
KIF4A_HUMAN1.224e-2245.83Chromosome-associated kinesin KIF4A OS=Homo sapien... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_62A05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62A05-B10-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675400 ID=CX675400; Name=CX675400; organism=Citrus sinensis; type=EST; length=809bp
TTTTTTTTTAACAGAGTGAAAAGGACTCAATTTCACTATCAATAAAAGTA
CATATTACAGAAATTGCTTCCGCGGTTCTACCTTCAAATTGTATTCATCA
ACTGATGAACTTTGTCATACAACAAACAATAGTCACCTTTATAAGCCAAT
AAATTAACTATCATGCAATGAAAAGCAAAATTAAGATCCTATAATCTCAC
CATGACAACCCACTCCAGTGCATGTGGGACACAGTCATTATGAACATGAC
AAAGTAAACACGTCAGTATTTCAACCATAACTCAACCGAGAATCAGCAGC
CTTCAAAGTCAATTGGCGACTGGGAACCCCAATTTCGCAGGCATTGACTC
TCGCAGCAAACCGTAGAGAGCAAAGGGACTCACCAACGGACGGAGAATCA
GGCGAGATGTTAACAAACATTAAAGTTTTAGAATCTCTCCCAAGACACGG
CTGAAGAAGATATGTCAGCTTCGAGTTCCTATATGGAATATGATCCTCCT
TCTTTGCCAAGGCAAATATAACATCACTCAATGATGACAGGCTTTTATTT
ATGGCCTGAGTTTCTTTCAAACGGTCACCAGTCGCCCCACTTCTTGATAA
TCGCTCACTTCCAGCTAGATCAATGAGGTTTAAGACACCCTGTACTTGTT
GTTCAGTTGCTTCATTTACTCCAAATATTCGTAACGTGAAGACAAAATGG
CTTCTTGATGAATACTCATTCATTTGAGTCTTGCCCACAGACCTGCTCTG
TGCAGCCTGCCTTAAAAGCGATGAAATCTCTGATATGCTACAGACATCAA
CAATCGTAA
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