CX675400

Overview
NameCX675400
Unique NameCX675400
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIF1A_HUMAN (Kinesin-like protein KIF1A OS=Homo sapiens GN=KIF1A PE=2 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 1.599e-22
Identity = 69/165 (41.82%), Postives = 93/165 (56.36%), Query Frame = -3
Query:  349 VCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQ----GVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA------------KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 795
            V S ++I  L+    ++R+V  T MNE SSRSH VF +         E  +       ++L+DLAGSER   +GA G RLKE   INKSL++L  VI ALA            KK D IPYR+S LT+LL+  LG +S+T M   +SP   +  E+L +LR+A R
Sbjct:  186 VTSYNDIQDLMDSGNKARTVAATNMNETSSRSHAVFNIIFTQKRHDAETNITTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLRYADR 350          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KF22B_XENLA (Kinesin-like protein KIF22-B OS=Xenopus laevis GN=kif22-B PE=2 SV=2)

HSP 1 Score: 106.301 bits (264), Expect = 2.088e-22
Identity = 65/154 (42.21%), Postives = 95/154 (61.69%), Query Frame = -3
Query:  349 TIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNE-ATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 807
            T+  + S  +       A+Q+R+V  T++N+ SSRSH V  +++    + A  +Q+ G L LIDLAGSE   R+G  G RLKE+ AIN SL +LS V+ AL +    IPYR+SKLT LLQ  LG  + ++M  NI+P+     ++L +L FAA+
Sbjct:  202 TLKTINSFGDFDEHFIPASQNRTVASTKLNDRSSRSHAVLLIKVQKSQQVAPFRQLIGKLYLIDLAGSEDNRRTGNQGIRLKESGAINSSLFTLSKVVDALNQGLPRIPYRDSKLTRLLQDSLGGSAHSVMITNIAPEQTYYFDTLTALNFAAK 355          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIF4_CHICK (Chromosome-associated kinesin KIF4 OS=Gallus gallus GN=KIF4 PE=2 SV=1)

HSP 1 Score: 105.916 bits (263), Expect = 2.727e-22
Identity = 68/154 (44.16%), Postives = 90/154 (58.44%), Query Frame = -3
Query:  349 DVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQ-VQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA---KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 798
            +V S  +  S L Q    R+V  T MN  SSRSH +FT+ I    +  +       L+L+DLAGSER  ++ A GDRLKE   IN+ L  L +VI AL    KK   +PYR+SKLT LLQ  LG +S TLM   +SP   ++ E+L +LR+A R
Sbjct:  181 NVASARDTVSCLEQGNNCRTVASTAMNSQSSRSHAIFTICIDQKKKNDKNSSFHSKLHLVDLAGSERQKKTKAEGDRLKEGININRGLLCLGNVISALGEENKKGGFVPYRDSKLTRLLQDSLGGNSHTLMIACVSPADSNLEETLNTLRYADR 334          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIF1A_MOUSE (Kinesin-like protein KIF1A OS=Mus musculus GN=Kif1a PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 2.727e-22
Identity = 69/165 (41.82%), Postives = 92/165 (55.76%), Query Frame = -3
Query:  349 VCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQ----GVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA------------KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 795
            V S ++I  L+    + R+V  T MNE SSRSH VF +         E  +       ++L+DLAGSER   +GA G RLKE   INKSL++L  VI ALA            KK D IPYR+S LT+LL+  LG +S+T M   +SP   +  E+L +LR+A R
Sbjct:  186 VTSYNDIQDLMDSGNKPRTVAATNMNETSSRSHAVFNIIFTQKRHDAETNITTEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEMDSGPNKNKKKKKTDFIPYRDSVLTWLLRENLGGNSRTAMVAALSPADINYDETLSTLRYADR 350          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIF22_XENTR (Kinesin-like protein KIF22 OS=Xenopus tropicalis GN=kif22 PE=2 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.562e-22
Identity = 62/137 (45.26%), Postives = 90/137 (65.69%), Query Frame = -3
Query:  349 AAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATE-QQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 756
            A+Q+R+V  T++N+ SSRSH V  +++    + +  +Q+ G L LIDLAGSE   R+G  G RLKE+ AIN SL +LS V+ AL +    IPYR+SKLT LLQ  LG  + ++M  NI+P+     ++L +L FAA+
Sbjct:  205 ASQNRTVASTKLNDRSSRSHAVLLIKVQKSQQVSPFRQLTGKLYLIDLAGSEDNRRTGNQGIRLKESGAINSSLFTLSKVVDALNQGLPRIPYRDSKLTRLLQDSLGGTAHSVMIANIAPEQKYYFDTLTALNFAAK 341          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KF22A_XENLA (Kinesin-like protein KIF22-A OS=Xenopus laevis GN=kif22-A PE=1 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 3.562e-22
Identity = 62/137 (45.26%), Postives = 89/137 (64.96%), Query Frame = -3
Query:  349 AAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATE-QQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 756
            A+Q+R+V  T++N+ SSRSH V  +++    +    +Q+ G L LIDLAGSE   R+G  G RLKE+ AIN SL +LS V+ AL +    IPYR+SKLT LLQ  LG  + ++M  NI+P+     ++L +L FAA+
Sbjct:  219 ASQNRTVASTKLNDRSSRSHAVLLIKVQKSQQVVPFRQLTGKLYLIDLAGSEDNRRTGNQGIRLKESGAINSSLFTLSKVVDALNQGLPRIPYRDSKLTRLLQDSLGGSAHSVMITNIAPEQTYYFDTLTALNFAAK 355          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIF9_MOUSE (Kinesin-like protein KIF9 OS=Mus musculus GN=Kif9 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 6.075e-22
Identity = 60/145 (41.38%), Postives = 90/145 (62.07%), Query Frame = -3
Query:  346 SLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNE--ATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA-KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARV 771
            SLL +   +R +    MN+ SSRSH +FT+ +   +   + E+ +   +NL+DLAGSERLS++G+ G  LKE   INKSLS L   I AL  +  DH+P+R SKLT+ L+  LG +   ++  NI  ++  + E+L SLRF +R+
Sbjct:  193 SLLFEGETNRIIASHTMNKNSSRSHCIFTIYMEAHSRTLSDEKYITSKINLVDLAGSERLSKTGSEGRVLKEATYINKSLSFLEQAIIALGDQNRDHVPFRQSKLTHALKDSLGGNCNMVLVTNIYGEAAQLDETLSSLRFDSRM 337          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KI21A_MOUSE (Kinesin-like protein KIF21A OS=Mus musculus GN=Kif21a PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 7.935e-22
Identity = 64/168 (38.10%), Postives = 91/168 (54.17%), Query Frame = -3
Query:  349 EISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGV---------------------LNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFAL---AKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 780
            E+   L+  A SR+   TQMN  SSRSH +FT+ +       +   +                        + +DLAGSERL R+GATG+R KE  +IN  L +L +VI AL   +K+  H+PYR+SKLT LLQ  LG +S+T+M   +SP      E+L +L++A R
Sbjct:  200 EMMQCLKLGALSRTTASTQMNVQSSRSHAIFTIHVCQTRVCPQTDAENATDNKLISESSPMNEFETLTAKFHFVDLAGSERLKRTGATGERAKEGISINCGLLALGNVISALGDKSKRATHVPYRDSKLTRLLQDSLGGNSQTIMIACVSPSDRDFMETLNTLKYANR 367          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KL61_DROME (Bipolar kinesin KRP-130 OS=Drosophila melanogaster GN=Klp61F PE=1 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.036e-21
Identity = 65/156 (41.67%), Postives = 91/156 (58.33%), Query Frame = -3
Query:  349 VDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIF----GVNEATEQQVQGVLNLIDLAGSERLSRSG-ATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 801
            + V S  ++  LL +  + R    T MN  SSRSH VF++ +     G+ E  +    G LNL+DLAGSE +S++G   G R++ET  IN+SL +L  VI AL  +  H+PYR SKLT LLQ  LG  +KT +   ISP    + E+L +L +A R
Sbjct:  198 IPVHSKDDVYKLLEKGKERRKTATTLMNAQSSRSHTVFSIVVHIRENGI-EGEDMLKIGKLNLVDLAGSENVSKAGNEKGIRVRETVNINQSLLTLGRVITALVDRAPHVPYRESKLTRLLQESLGGRTKTSIIATISPGHKDIEETLSTLEYAHR 352          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KI18A_MOUSE (Kinesin-like protein KIF18A OS=Mus musculus GN=Kif18a PE=2 SV=1)

HSP 1 Score: 102.834 bits (255), Expect = 2.309e-21
Identity = 71/170 (41.76%), Postives = 96/170 (56.47%), Query Frame = -3
Query:  298 SISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFT--LRIFGVNEATEQQVQ-GVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA---KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQLTLKA 789
            S  EI  LL    ++R+   T +N  SSRSH VF   LR      +  Q V+   ++LIDLAGSER S SGA G R  E   INKSL +L +VI ALA   ++  HIPYRNSKLT LL+  LG + +T+M   +SP S    ++  +L++A R    +  + S  L L +
Sbjct:  199 SSEEILQLLDNGNKNRTQHPTDVNAVSSRSHAVFQIYLRQQDKTASINQNVRIAKMSLIDLAGSERASVSGAKGSRFVEGTNINKSLLALGNVINALANTKRRNQHIPYRNSKLTRLLKDSLGGNCQTIMIAAVSPSSLFYDDTYNTLKYANRAKEIKSSLKSNVLNLNS 368          
The following BLAST results are available for this feature:
BLAST of CX675400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
KIF1A_HUMAN1.599e-2241.82Kinesin-like protein KIF1A OS=Homo sapiens GN=KIF1... [more]
KF22B_XENLA2.088e-2242.21Kinesin-like protein KIF22-B OS=Xenopus laevis GN=... [more]
KIF4_CHICK2.727e-2244.16Chromosome-associated kinesin KIF4 OS=Gallus gallu... [more]
KIF1A_MOUSE2.727e-2241.82Kinesin-like protein KIF1A OS=Mus musculus GN=Kif1... [more]
KIF22_XENTR3.562e-2245.26Kinesin-like protein KIF22 OS=Xenopus tropicalis G... [more]
KF22A_XENLA3.562e-2245.26Kinesin-like protein KIF22-A OS=Xenopus laevis GN=... [more]
KIF9_MOUSE6.075e-2241.38Kinesin-like protein KIF9 OS=Mus musculus GN=Kif9 ... [more]
KI21A_MOUSE7.935e-2238.10Kinesin-like protein KIF21A OS=Mus musculus GN=Kif... [more]
KL61_DROME1.036e-2141.67Bipolar kinesin KRP-130 OS=Drosophila melanogaster... [more]
KI18A_MOUSE2.309e-2141.76Kinesin-like protein KIF18A OS=Mus musculus GN=Kif... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_62A05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62A05-B10-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675400 ID=CX675400; Name=CX675400; organism=Citrus sinensis; type=EST; length=809bp
TTTTTTTTTAACAGAGTGAAAAGGACTCAATTTCACTATCAATAAAAGTA
CATATTACAGAAATTGCTTCCGCGGTTCTACCTTCAAATTGTATTCATCA
ACTGATGAACTTTGTCATACAACAAACAATAGTCACCTTTATAAGCCAAT
AAATTAACTATCATGCAATGAAAAGCAAAATTAAGATCCTATAATCTCAC
CATGACAACCCACTCCAGTGCATGTGGGACACAGTCATTATGAACATGAC
AAAGTAAACACGTCAGTATTTCAACCATAACTCAACCGAGAATCAGCAGC
CTTCAAAGTCAATTGGCGACTGGGAACCCCAATTTCGCAGGCATTGACTC
TCGCAGCAAACCGTAGAGAGCAAAGGGACTCACCAACGGACGGAGAATCA
GGCGAGATGTTAACAAACATTAAAGTTTTAGAATCTCTCCCAAGACACGG
CTGAAGAAGATATGTCAGCTTCGAGTTCCTATATGGAATATGATCCTCCT
TCTTTGCCAAGGCAAATATAACATCACTCAATGATGACAGGCTTTTATTT
ATGGCCTGAGTTTCTTTCAAACGGTCACCAGTCGCCCCACTTCTTGATAA
TCGCTCACTTCCAGCTAGATCAATGAGGTTTAAGACACCCTGTACTTGTT
GTTCAGTTGCTTCATTTACTCCAAATATTCGTAACGTGAAGACAAAATGG
CTTCTTGATGAATACTCATTCATTTGAGTCTTGCCCACAGACCTGCTCTG
TGCAGCCTGCCTTAAAAGCGATGAAATCTCTGATATGCTACAGACATCAA
CAATCGTAA
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