CX675400

Overview
NameCX675400
Unique NameCX675400
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIF12_MOUSE (Kinesin-like protein KIF12 OS=Mus musculus GN=Kif12 PE=2 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.829e-18
Identity = 60/165 (36.36%), Postives = 91/165 (55.15%), Query Frame = -3
Query:  349 IVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQ----------GVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA---KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 804
            +V+  S+  +  LL+     R      +N+ SSRSH + TL I   +  T QQV           G L  +DLAGSE+++ +G+ G  + E  +IN+SL +L   I  L    +K++HIP+R+SKLT LL   LG    TLM   +SP +  + E+L +LR+A+R
Sbjct:  195 VVEFGSLEALMELLQMGLSRRRSSSHTLNQASSRSHALLTLHI---SRPTSQQVPPVDLGEPPVGGKLCFVDLAGSEKVAATGSQGQLMLEANSINRSLLALGHCISLLLDPQRKQNHIPFRDSKLTKLLADSLGGRGVTLMVACVSPSAQCLPETLSTLRYASR 356          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KI18B_MOUSE (Kinesin-like protein KIF18B OS=Mus musculus GN=Kif18b PE=2 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 1.829e-18
Identity = 60/171 (35.09%), Postives = 99/171 (57.89%), Query Frame = -3
Query:  304 SISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTL------RIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK---KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQLTL 789
            S  ++  +L +   SR+   T  N  SSRSH +F +      R+ G+ +A        ++LIDLAGSER S + A G+RL+E   IN+SL +L +V+ ALA    ++ H+PYR+SKLT LL+  +G + +T+M   ISP S +  ++  +L++A R     + + S  +++
Sbjct:  197 SAEQLLEMLTRGNCSRTQHPTDANATSSRSHAIFQIFVKQQDRVPGLTQALRV---AKMSLIDLAGSERASSTHAKGERLREGANINRSLLALINVLNALADAKGRKSHVPYRDSKLTRLLKDSIGGNCRTVMIAAISPSSLTYEDTYNTLKYADRAKEIRLTLKSNVISV 364          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIF22_DANRE (Kinesin-like protein KIF22 OS=Danio rerio GN=kif22 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.120e-18
Identity = 58/155 (37.42%), Postives = 89/155 (57.42%), Query Frame = -3
Query:  349 TIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQ-GVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFAL-AKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 807
            T   + S ++  +    A+ +R+   T++N+ SSRSH +  +++         + Q G L L+DLAGSE   R+G  G RLKE+ AIN SL +LS V+ AL       +PYR+SKLT LLQ  LG  + ++M  NI+P+     ++  +L FAA+
Sbjct:  187 THTPLSSFADFDTHFIPASLNRTTASTKLNQRSSRSHAILLIKVVKSQRGPPHRQQTGKLYLVDLAGSEDNRRTGNQGIRLKESGAINLSLFTLSKVVDALNTGAGGRVPYRDSKLTRLLQDSLGGSAHSVMITNIAPEYKYYFDTFSALNFAAK 341          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: ARK1_ARATH (Armadillo repeat-containing kinesin-like protein 1 OS=Arabidopsis thaliana GN=ARK1 PE=1 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 3.120e-18
Identity = 56/167 (33.53%), Postives = 90/167 (53.89%), Query Frame = -3
Query:  349 TIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIF-GVNEATEQQV-------------QGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 807
            T+V++  +     +L+    +R    T+MN  SSRSH + T+ +   +NE TE+               +  L ++DLAGSER+++SG  G  ++E + IN SL+SL   I ALA+   HIP R+SKLT LL+   G  ++T + + I P +    E+  ++ F  R
Sbjct:  271 TVVNIQDLDHFLQVLQVGETNRHAANTKMNTESSRSHAILTVYVRRAMNEKTEKAKPESLGDKAIPRVRKSKLLIVDLAGSERINKSGTDGHMIEEAKFINLSLTSLGKCINALAEGSSHIPTRDSKLTRLLRDSFGGSARTSLIITIGPSARYHAETTSTIMFGQR 437          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIF2B_BOVIN (Kinesin-like protein KIF2B OS=Bos taurus GN=KIF2B PE=2 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.075e-18
Identity = 59/174 (33.91%), Postives = 95/174 (54.60%), Query Frame = -3
Query:  283 DVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSER-LSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPC-LGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQLTLKAADSRL 798
            +VC + ++ +L+      R+ G+T +N +SSRSH VF + +      +  ++ G  +L+DLAG+ER    + A   R  E   INKSL +L + I AL + + H P+R SKLT +L+   +G++S T M   ISP   S   +L +LR+A RV    + +  R   L  A+  +
Sbjct:  393 EVCCVEDMLNLVELGNSCRTSGQTSVNAHSSRSHAVFQIIL-----KSRGKLHGKFSLVDLAGNERGADTAKANRKRQLEGAEINKSLLALKECIRALGQNKSHTPFRASKLTQVLRDSFIGQNSSTCMIATISPGMASCENTLNTLRYANRVKEITLNLRPRHRCLYPAEREM 561          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIF19_XENLA (Kinesin-like protein KIF19 OS=Xenopus laevis GN=kif19 PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 6.951e-18
Identity = 62/158 (39.24%), Postives = 92/158 (58.23%), Query Frame = -3
Query:  349 TIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRI---FGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKK--EDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 807
            T V   +  EI  LL +  + R+   T  N+ SSRSH +  + +     V   T++   G L +IDLAGSER S++   G R+KE   IN+SL +L + I AL+++    ++ YR+SKLT LL+  LG +S+T+M  +ISP S S  ES  +L +A R
Sbjct:  185 TEVSTINAKEIMQLLMKGNRQRTQEPTAANKTSSRSHAILQVTVRQKSRVKNITQEVRVGRLFMIDLAGSERASQTQNRGLRMKEGAHINRSLLALGNCINALSERGSNKYVNYRDSKLTRLLKDSLGGNSRTVMIAHISPASTSFEESRNTLTYADR 342          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIF12_HUMAN (Kinesin-like protein KIF12 OS=Homo sapiens GN=KIF12 PE=2 SV=3)

HSP 1 Score: 90.8929 bits (224), Expect = 9.078e-18
Identity = 60/165 (36.36%), Postives = 91/165 (55.15%), Query Frame = -3
Query:  349 IVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQ----------VQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA---KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 804
            +V+  S+  +  LL+     R      +N+ SSRSH + TL I   +  T QQ          V G L  +DLAGSE+++ +G+ G+ + E  +IN+SL +L   I  L    +K+ HIP+R+SKLT LL   LG    TLM   +SP +  + E+L +LR+A+R
Sbjct:  195 VVEFGSLEALMELLQTGLSRRRNSAHTLNQASSRSHALLTLYI---SRQTAQQMPSVDPGEPPVGGKLCFVDLAGSEKVAATGSRGELMLEANSINRSLLALGHCISLLLDPQRKQSHIPFRDSKLTKLLADSLGGRGVTLMVACVSPSAQCLPETLSTLRYASR 356          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIF25_HUMAN (Kinesin-like protein KIF25 OS=Homo sapiens GN=KIF25 PE=2 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.186e-17
Identity = 50/113 (44.25%), Postives = 72/113 (63.72%), Query Frame = -3
Query:  313 QQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQ 651
            +QVQ  L L+D AGSE +  SG TG  L+E   I++SL++L+ V+ AL +   H PYRNS+LT+LLQ CLG D+K L+ + ISP    + ++L  L F  R    + G P+R+
Sbjct:  259 EQVQARLQLVDSAGSECVGVSGVTGLALREMACISRSLAALAGVLGALLEHRGHAPYRNSRLTHLLQDCLGGDAKLLVILCISPSQRHLAQTLQGLGFGIRARQVQRG-PARK 370          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KI20B_HUMAN (Kinesin-like protein KIF20B OS=Homo sapiens GN=KIF20B PE=1 SV=2)

HSP 1 Score: 90.5077 bits (223), Expect = 1.186e-17
Identity = 59/157 (37.58%), Postives = 87/157 (55.41%), Query Frame = -3
Query:  352 VDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGV--LNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFAL-----AKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAA 801
            + V    E   LL+   + +SV  T++N  SSRSH +FT++I  + ++   +V  V  L+L DLAGSER  ++   G+RL+ET  IN SL +L   I  L     +K + H+P+R SKLT+  Q       K  M VNIS    +  E+L  L+F+A
Sbjct:  318 IQVSDSKEAYRLLKLGIKHQSVAFTKLNNASSRSHSIFTVKILQIEDSEMSRVIRVSELSLCDLAGSERTMKTQNEGERLRETGNINTSLLTLGKCINVLKNSEKSKFQQHVPFRESKLTHYFQSFFNGKGKICMIVNISQCYLAYDETLNVLKFSA 474          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KLP5_SCHPO (Kinesin-like protein 5 OS=Schizosaccharomyces pombe GN=klp5 PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.549e-17
Identity = 60/155 (38.71%), Postives = 88/155 (56.77%), Query Frame = -3
Query:  349 SISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTL------RIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK--KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 789
            S+ EI  ++ +   +R++  T+ N  SSRSH V  +      R  G+NE         L++IDLAGSER + +   G RL E   INKSL +L + I AL    +  H+PYR+SKLT LL+  LG + +T+M V +SP S    E+  +L++A R
Sbjct:  235 SLEEIIDIIMKGNANRTMSPTEANAASSRSHAVLQVTLIQKPRTAGINE---DHTLATLSIIDLAGSERATATKLRGSRLFEGANINKSLLALGNCINALCDPHRRAHVPYRDSKLTRLLKFSLGGNCRTVMIVCVSPSSVHYEETHNTLKYANR 386          
The following BLAST results are available for this feature:
BLAST of CX675400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
KIF12_MOUSE1.829e-1836.36Kinesin-like protein KIF12 OS=Mus musculus GN=Kif1... [more]
KI18B_MOUSE1.829e-1835.09Kinesin-like protein KIF18B OS=Mus musculus GN=Kif... [more]
KIF22_DANRE3.120e-1837.42Kinesin-like protein KIF22 OS=Danio rerio GN=kif22... [more]
ARK1_ARATH3.120e-1833.53Armadillo repeat-containing kinesin-like protein 1... [more]
KIF2B_BOVIN4.075e-1833.91Kinesin-like protein KIF2B OS=Bos taurus GN=KIF2B ... [more]
KIF19_XENLA6.951e-1839.24Kinesin-like protein KIF19 OS=Xenopus laevis GN=ki... [more]
KIF12_HUMAN9.078e-1836.36Kinesin-like protein KIF12 OS=Homo sapiens GN=KIF1... [more]
KIF25_HUMAN1.186e-1744.25Kinesin-like protein KIF25 OS=Homo sapiens GN=KIF2... [more]
KI20B_HUMAN1.186e-1737.58Kinesin-like protein KIF20B OS=Homo sapiens GN=KIF... [more]
KLP5_SCHPO1.549e-1738.71Kinesin-like protein 5 OS=Schizosaccharomyces pomb... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_62A05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62A05-B10-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675400 ID=CX675400; Name=CX675400; organism=Citrus sinensis; type=EST; length=809bp
TTTTTTTTTAACAGAGTGAAAAGGACTCAATTTCACTATCAATAAAAGTA
CATATTACAGAAATTGCTTCCGCGGTTCTACCTTCAAATTGTATTCATCA
ACTGATGAACTTTGTCATACAACAAACAATAGTCACCTTTATAAGCCAAT
AAATTAACTATCATGCAATGAAAAGCAAAATTAAGATCCTATAATCTCAC
CATGACAACCCACTCCAGTGCATGTGGGACACAGTCATTATGAACATGAC
AAAGTAAACACGTCAGTATTTCAACCATAACTCAACCGAGAATCAGCAGC
CTTCAAAGTCAATTGGCGACTGGGAACCCCAATTTCGCAGGCATTGACTC
TCGCAGCAAACCGTAGAGAGCAAAGGGACTCACCAACGGACGGAGAATCA
GGCGAGATGTTAACAAACATTAAAGTTTTAGAATCTCTCCCAAGACACGG
CTGAAGAAGATATGTCAGCTTCGAGTTCCTATATGGAATATGATCCTCCT
TCTTTGCCAAGGCAAATATAACATCACTCAATGATGACAGGCTTTTATTT
ATGGCCTGAGTTTCTTTCAAACGGTCACCAGTCGCCCCACTTCTTGATAA
TCGCTCACTTCCAGCTAGATCAATGAGGTTTAAGACACCCTGTACTTGTT
GTTCAGTTGCTTCATTTACTCCAAATATTCGTAACGTGAAGACAAAATGG
CTTCTTGATGAATACTCATTCATTTGAGTCTTGCCCACAGACCTGCTCTG
TGCAGCCTGCCTTAAAAGCGATGAAATCTCTGATATGCTACAGACATCAA
CAATCGTAA
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