CX675400

Overview
NameCX675400
Unique NameCX675400
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIF2B_MACFA (Kinesin-like protein KIF2B OS=Macaca fascicularis GN=KIF2B PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.549e-17
Identity = 57/153 (37.25%), Postives = 88/153 (57.52%), Query Frame = -3
Query:  346 DVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSER-LSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPC-LGRDSKTLMFVNISPDSPSVGESLCSLRFAARV 798
            +VC + E+ +L+      R+  +T +N +SSRSH VF + +      +  ++ G  +L+DLAG+ER    + A+  R  E   INKSL +L + I AL + + H P+R SKLT +L+   +GR+S T M   ISP   S   +L +LR+A RV
Sbjct:  390 EVCCVEEVLNLVELGNSCRTSRQTSVNAHSSRSHAVFQIIL-----KSGGKLHGKFSLVDLAGNERGADTTKASRKRQLEGAEINKSLLALKECILALGQNKPHTPFRASKLTQVLRDSFIGRNSSTCMIATISPGMTSCENTLNTLRYANRV 537          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KI20B_MOUSE (Kinesin-like protein KIF20B OS=Mus musculus GN=Kif20b PE=1 SV=2)

HSP 1 Score: 90.1225 bits (222), Expect = 1.549e-17
Identity = 58/155 (37.42%), Postives = 83/155 (53.55%), Query Frame = -3
Query:  355 VDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGV--LNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKE----DHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFA 801
            V V    E   LL+   + +SV  T++N  SSRSH +FT+RI  + ++   +V  V  L+L DLAGSER  ++   G+RL+E   IN SL +L   I  L   E     H+P+R SKLT+  Q       K  M +NIS    +  E+L  L+F+
Sbjct:  317 VQVSDSKEAYRLLKLGVKHQSVAFTKLNNASSRSHSIFTIRILQIEDSEIPRVTRVSELSLCDLAGSERSMKTQNEGERLREAGNINTSLLTLGKCINVLKNSEKSKVQHVPFRESKLTHYFQSFFTGKGKICMIINISQSCSAYDETLNVLKFS 471          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: GRIMP_ARATH (Geminivirus Rep-interacting motor protein OS=Arabidopsis thaliana GN=GRIMP PE=1 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.549e-17
Identity = 52/144 (36.11%), Postives = 81/144 (56.25%), Query Frame = -3
Query:  349 EISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 780
            E   +L+ A  +R   K++ N     +H + ++ I+  N  T + +   L+L+DLAGSE L     +GD + +   +  S+S+L DV+ +L   +D IPY NS LT +L   LG  SKTLM VNI P   ++ E++  L +AAR
Sbjct:  313 EFLGVLKSAFLNRGNYKSKFNV----THLIVSIHIYYSNTITGENIYSKLSLVDLAGSEGLIMENDSGDHVTDLLHVMNSISALGDVLSSLTSGKDSIPYDNSILTRVLADSLGGSSKTLMIVNICPSVQTLSETISCLNYAAR 452          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIF2B_MOUSE (Kinesin-like protein KIF2B OS=Mus musculus GN=Kif2b PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.022e-17
Identity = 59/153 (38.56%), Postives = 87/153 (56.86%), Query Frame = -3
Query:  346 DVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSER-LSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPC-LGRDSKTLMFVNISPDSPSVGESLCSLRFAARV 798
            +V  + E+ +L+      R+ G+T +N +SSRSH VF L +         ++ G  +L+DLAG+ER    + AT  R  E   INKSL +L + I AL K + H P+R SKLT +L+   +G++S T M   ISP   S   +L +LR+A RV
Sbjct:  393 EVSCVEEVLNLVELGNSCRTSGQTSVNAHSSRSHAVFQLIL-----KAGGKLHGKFSLVDLAGNERGADTAKATRKRQLEGAEINKSLLALKECIRALGKNKSHTPFRASKLTQVLRDSFIGQNSYTCMIATISPGMTSCENTLNTLRYANRV 540          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIF2B_HUMAN (Kinesin-like protein KIF2B OS=Homo sapiens GN=KIF2B PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.641e-17
Identity = 57/160 (35.62%), Postives = 90/160 (56.25%), Query Frame = -3
Query:  325 DVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSER-LSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPC-LGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGV 798
            +VC + E+ +L+      R+  +T +N +SSRSH VF + +      + + + G  +L+DLAG+ER    + A+  R  E   INKSL +L + I AL + + H P+R SKLT +L+   +G++S T M   ISP   S   +L +LR+A RV    + V
Sbjct:  393 EVCCVEEVLNLVEIGNSCRTSRQTSVNAHSSRSHAVFQIIL-----KSGRIMHGKFSLVDLAGNERGADTTKASRKRQLEGAEINKSLLALKECILALGQNKPHTPFRASKLTLVLRDSFIGQNSSTCMIATISPGMTSCENTLNTLRYANRVKKLNVDV 547          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: CENPE_HUMAN (Centromere-associated protein E OS=Homo sapiens GN=CENPE PE=1 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 2.641e-17
Identity = 59/145 (40.69%), Postives = 87/145 (60.00%), Query Frame = -3
Query:  352 LRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGV-----LNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKE--DHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAA 765
            + +  +SR  G+T+MN+ SSRSH +F + +    +      +G      LNL+DLAGSER +++GA G RLKE   IN+SL  L  VI  L+  +    I YR+SKLT +LQ  LG ++KT +   I+P   S  E+L +L+FA+
Sbjct:  182 ITKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPSNCEGSVKVSHLNLVDLAGSERAAQTGAAGVRLKEGCNINRSLFILGQVIKKLSDGQVGGFINYRDSKLTRILQNSLGGNAKTRIICTITP--VSFDETLTALQFAS 324          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIF11_DICDI (Kinesin-related protein 11 OS=Dictyostelium discoideum GN=kif11 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.450e-17
Identity = 63/159 (39.62%), Postives = 85/159 (53.46%), Query Frame = -3
Query:  349 VCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQG---------VLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKE-DHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 795
            V S+  + SL+      R VG T  N  SSRSH +F + I       E    G          LNLIDLAGSE+ S S  +  R KE   INKSL +L  VI  L++K+  +IPYR+SKLT +LQ  L  +S+  +   I+  S +  ES  +L+FA+R
Sbjct:  243 VLSVEHVLSLISAGEAHRHVGSTSYNLQSSRSHTIFKMIIESKEVLPEGSGSGGLESPVRYSTLNLIDLAGSEKASESTISAIRNKEGSYINKSLLTLGTVISKLSEKDTGYIPYRDSKLTRVLQNSLSGNSRVAIICTITLASNNFEESHNTLKFASR 401          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KI59C_DROME (Kinesin-like protein Klp59C OS=Drosophila melanogaster GN=Klp59C PE=1 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.450e-17
Identity = 62/166 (37.35%), Postives = 89/166 (53.61%), Query Frame = -3
Query:  310 VCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSER-LSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCL--GRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEI-GVPSRQL 795
            V + +E+  LL      R+ G T  N  SSRSH VF + +     A  +++ G  +LIDLAG+ER    S A      E   INKSL  L + I AL ++  H+P+R SKLT +L+     G+  KT M   ISP   SV  +L +LR+A RV    +  +PS+++
Sbjct:  369 VQNTAEVLDLLELGNSVRTSGHTSANSKSSRSHAVFQIVL---RSAAGEKLHGKFSLIDLAGNERGADNSSADRQTRLEGSEINKSLLVLKECIRALGRQSSHLPFRGSKLTQVLRDSFIGGKKVKTCMIAMISPCLHSVEHTLNTLRYADRVKELSVESIPSKRM 531          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KLP6_SCHPO (Kinesin-like protein 6 OS=Schizosaccharomyces pombe GN=klp6 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.506e-17
Identity = 57/159 (35.85%), Postives = 89/159 (55.97%), Query Frame = -3
Query:  349 SISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQ----------VQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA--KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 789
            ++ E+  ++ +   +R++  T+ N  SSRSH V  + I    ++ E+Q          V+ V + IDLAGSER S +   G RL E   IN+SL +L + I +L   ++  H+PYR+SKLT LL+  LG + +T M V ISP S    E+  +L++  R
Sbjct:  227 NLEEVMEIIIRGNSNRTMSPTEANAVSSRSHAVLQIYITQTPKSGEKQEESESQNSHKVRSVFSFIDLAGSERASATKNRGKRLVEGANINRSLLALGNCINSLCEPRRRQHVPYRDSKLTRLLKFSLGGNCRTCMIVCISPSSEHYDETHNTLKYGNR 385          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIF2B_RAT (Kinesin-like protein KIF2B OS=Rattus norvegicus GN=Kif2b PE=2 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 4.506e-17
Identity = 59/153 (38.56%), Postives = 87/153 (56.86%), Query Frame = -3
Query:  346 DVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSER-LSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPC-LGRDSKTLMFVNISPDSPSVGESLCSLRFAARV 798
            +V  + E+ +L+      R+ G+T +N +SSRSH VF L +         ++ G  +L+DLAG+ER    + AT  R  E   INKSL +L + I AL K + H P+R SKLT +L+   +G++S T M   ISP   S   +L +LR+A RV
Sbjct:  393 EVGCVEEVLNLVELGNSCRTSGQTSVNAHSSRSHAVFQLIL-----KCGGKLHGKFSLVDLAGNERGADTAKATRKRQLEGAEINKSLLALKECIRALGKNKSHTPFRASKLTQVLRDSFIGQNSYTCMIATISPGMTSCENTLNTLRYANRV 540          
The following BLAST results are available for this feature:
BLAST of CX675400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
KIF2B_MACFA1.549e-1737.25Kinesin-like protein KIF2B OS=Macaca fascicularis ... [more]
KI20B_MOUSE1.549e-1737.42Kinesin-like protein KIF20B OS=Mus musculus GN=Kif... [more]
GRIMP_ARATH1.549e-1736.11Geminivirus Rep-interacting motor protein OS=Arabi... [more]
KIF2B_MOUSE2.022e-1738.56Kinesin-like protein KIF2B OS=Mus musculus GN=Kif2... [more]
KIF2B_HUMAN2.641e-1735.63Kinesin-like protein KIF2B OS=Homo sapiens GN=KIF2... [more]
CENPE_HUMAN2.641e-1740.69Centromere-associated protein E OS=Homo sapiens GN... [more]
KIF11_DICDI3.450e-1739.62Kinesin-related protein 11 OS=Dictyostelium discoi... [more]
KI59C_DROME3.450e-1737.35Kinesin-like protein Klp59C OS=Drosophila melanoga... [more]
KLP6_SCHPO4.506e-1735.85Kinesin-like protein 6 OS=Schizosaccharomyces pomb... [more]
KIF2B_RAT4.506e-1738.56Kinesin-like protein KIF2B OS=Rattus norvegicus GN... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_62A05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62A05-B10-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675400 ID=CX675400; Name=CX675400; organism=Citrus sinensis; type=EST; length=809bp
TTTTTTTTTAACAGAGTGAAAAGGACTCAATTTCACTATCAATAAAAGTA
CATATTACAGAAATTGCTTCCGCGGTTCTACCTTCAAATTGTATTCATCA
ACTGATGAACTTTGTCATACAACAAACAATAGTCACCTTTATAAGCCAAT
AAATTAACTATCATGCAATGAAAAGCAAAATTAAGATCCTATAATCTCAC
CATGACAACCCACTCCAGTGCATGTGGGACACAGTCATTATGAACATGAC
AAAGTAAACACGTCAGTATTTCAACCATAACTCAACCGAGAATCAGCAGC
CTTCAAAGTCAATTGGCGACTGGGAACCCCAATTTCGCAGGCATTGACTC
TCGCAGCAAACCGTAGAGAGCAAAGGGACTCACCAACGGACGGAGAATCA
GGCGAGATGTTAACAAACATTAAAGTTTTAGAATCTCTCCCAAGACACGG
CTGAAGAAGATATGTCAGCTTCGAGTTCCTATATGGAATATGATCCTCCT
TCTTTGCCAAGGCAAATATAACATCACTCAATGATGACAGGCTTTTATTT
ATGGCCTGAGTTTCTTTCAAACGGTCACCAGTCGCCCCACTTCTTGATAA
TCGCTCACTTCCAGCTAGATCAATGAGGTTTAAGACACCCTGTACTTGTT
GTTCAGTTGCTTCATTTACTCCAAATATTCGTAACGTGAAGACAAAATGG
CTTCTTGATGAATACTCATTCATTTGAGTCTTGCCCACAGACCTGCTCTG
TGCAGCCTGCCTTAAAAGCGATGAAATCTCTGATATGCTACAGACATCAA
CAATCGTAA
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