CX675400

Overview
NameCX675400
Unique NameCX675400
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIF3C_MOUSE (Kinesin-like protein KIF3C OS=Mus musculus GN=Kif3c PE=2 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 2.231e-24
Identity = 72/177 (40.68%), Postives = 99/177 (55.93%), Query Frame = -3
Query:  349 SISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQ---GVLNLIDLAGSERLSRSG--------------------------ATGDRLKETQAINKSLSSLSDVIFALA-KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 789
            ++ EI  ++    Q+R+VG T MNE SSRSH +F + +      ++ Q     G LNL+DLAGSER +++G                          ++G+R KE   IN SLS+L +VI ALA  +  HIPYR+SKLT LLQ  LG ++KT+M   + P S S  ESL +LRFA R
Sbjct:  187 NVKEIEHVMNLGNQARAVGSTHMNEVSSRSHAIFVITVECSERGSDGQDHIRVGKLNLVDLAGSERQNKAGPNAAGGPATQPTAGGGSGSGSASGSASSGERPKEASKINLSLSALGNVIAALAGNRSTHIPYRDSKLTRLLQDSLGGNAKTIMVATLGPASHSYDESLSTLRFANR 363          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIF11_MOUSE (Kinesin-like protein KIF11 OS=Mus musculus GN=Kif11 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.231e-24
Identity = 74/173 (42.77%), Postives = 104/173 (60.12%), Query Frame = -3
Query:  298 VDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEAT---EQQVQ-GVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARV-NACEIGVPSRQLTLKA 801
            + V +  E+  +L + A  R+   T MN YSSRSH VF++ I  + E T   E+ V+ G LNL+DLAGSE + RSGA   R +E   IN+SL +L  VI AL ++  HIPYR SKLT +LQ  LG  ++T +   ISP S ++ E+L +L +A R  N       +++LT KA
Sbjct:  201 ITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIH-MKETTIDGEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHIPYRESKLTRILQDSLGGRTRTSIIATISPASFNLEETLSTLEYAHRAKNIMNKPEVNQKLTKKA 372          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIF11_HUMAN (Kinesin-like protein KIF11 OS=Homo sapiens GN=KIF11 PE=1 SV=2)

HSP 1 Score: 112.849 bits (281), Expect = 2.231e-24
Identity = 73/173 (42.20%), Postives = 104/173 (60.12%), Query Frame = -3
Query:  298 VDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEAT---EQQVQ-GVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARV-NACEIGVPSRQLTLKA 801
            + V +  E+  +L + A  R+   T MN YSSRSH VF++ I  + E T   E+ V+ G LNL+DLAGSE + RSGA   R +E   IN+SL +L  VI AL ++  H+PYR SKLT +LQ  LG  ++T +   ISP S ++ E+L +L +A R  N       +++LT KA
Sbjct:  202 ITVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIH-MKETTIDGEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHVPYRESKLTRILQDSLGGRTRTSIIATISPASLNLEETLSTLEYAHRAKNILNKPEVNQKLTKKA 373          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: CIN8_ASHGO (Kinesin-like protein CIN8 OS=Ashbya gossypii GN=CIN8 PE=3 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.231e-24
Identity = 62/141 (43.97%), Postives = 92/141 (65.25%), Query Frame = -3
Query:  349 SLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 771
            ++L++  + R V  T+MN++SSRSH +FT+ ++   +    +V   +NL+DLAGSE +SRSGA   R KE  +IN+SL +L  VI +LA K  HIP+R SKLT LLQ  LG ++KT +   ISP   +  E+  +L +AA+
Sbjct:  266 NVLQKGLKHRQVASTKMNDFSSRSHTIFTIMLYKNCDGELFRVSK-MNLVDLAGSENISRSGAQNQRAKEAGSINQSLLTLGRVINSLADKSIHIPFRESKLTRLLQDSLGGNTKTALIATISPAKINADETSSTLEYAAK 405          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIF15_RAT (Kinesin-like protein KIF15 OS=Rattus norvegicus GN=Kif15 PE=2 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.914e-24
Identity = 69/155 (44.52%), Postives = 94/155 (60.65%), Query Frame = -3
Query:  349 VCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQV--QGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK----KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 795
            V S +E   +L +  ++R V  T MN  SSRSH VFT+ I  + +++E       +LNL+DLAGSER   + A G RLKE   IN+SLS L  VI AL      K+ H+ YR+SKLT+LL+  LG ++KT +  N+ P S   GE+L +L FA R
Sbjct:  205 VASAAEAYQVLSRGWRNRRVASTSMNRESSRSHAVFTITIESMEKSSEAVNIRTSLLNLVDLAGSERQKDTHAEGMRLKEAGNINRSLSCLGQVITALVDVGNGKQRHVCYRDSKLTFLLRDSLGGNAKTAIIANVHPGSRCFGETLSTLNFAQR 359          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIF15_MOUSE (Kinesin-like protein KIF15 OS=Mus musculus GN=Kif15 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.914e-24
Identity = 70/155 (45.16%), Postives = 94/155 (60.65%), Query Frame = -3
Query:  349 VCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQV--QGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAK----KEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 795
            V S +E   +L +  ++R V  T MN  SSRSH VFT+ I  + +++E       +LNL+DLAGSER   + A G RLKE   IN+SLS L  VI AL      K+ HI YR+SKLT+LL+  LG ++KT +  N+ P S   GE+L +L FA R
Sbjct:  205 VTSAAETYQVLSRGWRNRRVASTSMNRESSRSHAVFTITIESMEKSSETVNIRTSLLNLVDLAGSERQKDTHAEGMRLKEAGNINRSLSCLGQVITALVDVGNGKQRHICYRDSKLTFLLRDSLGGNAKTAIIANVHPGSRCFGETLSTLNFAQR 359          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIF14_HUMAN (Kinesin-like protein KIF14 OS=Homo sapiens GN=KIF14 PE=1 SV=1)

HSP 1 Score: 112.464 bits (280), Expect = 2.914e-24
Identity = 70/157 (44.59%), Postives = 96/157 (61.15%), Query Frame = -3
Query:  355 VCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRI------FGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDH----IPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFA 795
            V S ++I S L    + R+   T MN+ SSRSH VFTL +      F   E  + ++   +NLIDLAGSER S +   GDRLKE  +INKSL +L  VI AL+++ +     IPYR S LT+LL+  LG +SKT M   ISP + ++ E+L +LR+A
Sbjct:  539 VSSYADIQSWLELGNKQRATAATGMNDKSSRSHSVFTLVMTQTKTEFVEGEEHDHRITSRINLIDLAGSERCSTAHTNGDRLKEGVSINKSLLTLGKVISALSEQANQRSVFIPYRESVLTWLLKESLGGNSKTAMIATISPAASNIEETLSTLRYA 695          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: CIN8_YEAST (Kinesin-like protein CIN8 OS=Saccharomyces cerevisiae GN=CIN8 PE=1 SV=3)

HSP 1 Score: 112.464 bits (280), Expect = 2.914e-24
Identity = 60/141 (42.55%), Postives = 92/141 (65.25%), Query Frame = -3
Query:  349 SLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 771
            +LL++  + R V  T+MN++SSRSH +FT+ ++  ++    ++   +NL+DLAGSE ++RSGA   R KE  +IN+SL +L  VI AL  K  HIP+R SKLT LLQ  LG ++KT +   ISP   +  E+  +L +A++
Sbjct:  334 NLLQKGLKHRQVASTKMNDFSSRSHTIFTITLYKKHQDELFRISK-MNLVDLAGSENINRSGALNQRAKEAGSINQSLLTLGRVINALVDKSGHIPFRESKLTRLLQDSLGGNTKTALIATISPAKVTSEETCSTLEYASK 473          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KLP1_CHLRE (Kinesin-like protein KLP1 OS=Chlamydomonas reinhardtii GN=KLP1 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.805e-24
Identity = 66/156 (42.31%), Postives = 95/156 (60.90%), Query Frame = -3
Query:  346 TIVDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIF--GVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARV 807
            T+V V S  E  +      Q R+     +N  SSRSH VFT+ +     + A+E+ V   LNL+DLAGSER  ++G TG  LKE Q IN+SLS L   + AL++K+ ++P+R +KLT +L+  LG + KT+M  NI  +     E+L +LRFA+RV
Sbjct:  177 TLVPVRSEEEALAQFFLGEQGRTTAGHVLNAESSRSHTVFTIHVEMRTSDAASERAVLSKLNLVDLAGSERTKKTGVTGQTLKEAQFINRSLSFLEQTVNALSRKDTYVPFRQTKLTAVLRDALGGNCKTVMVANIWAEPSHNEETLSTLRFASRV 332          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIF7_HUMAN (Kinesin-like protein KIF7 OS=Homo sapiens GN=KIF7 PE=1 SV=2)

HSP 1 Score: 112.079 bits (279), Expect = 3.805e-24
Identity = 66/162 (40.74%), Postives = 97/162 (59.88%), Query Frame = -3
Query:  349 VDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATE--------QQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA---KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 801
            VDV  + E+ SLL     +R  G T +N  SSRSH VFT+ +     A          Q +    + +DLAGSER+ ++G+TG+RLKE+  IN SL +L +VI AL    ++  HIPYR+SK+T +L+  LG ++KT+M   +SP S    E+L +L +A+R
Sbjct:  184 VDVEGLDEVLSLLEMGNAARHTGATHLNHLSSRSHTVFTVTLEQRGRAPSRLPRPAPGQLLVSKFHFVDLAGSERVLKTGSTGERLKESIQINSSLLALGNVISALGDPQRRGSHIPYRDSKITRILKDSLGGNAKTVMIACVSPSSSDFDETLNTLNYASR 345          
The following BLAST results are available for this feature:
BLAST of CX675400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
KIF3C_MOUSE2.231e-2440.68Kinesin-like protein KIF3C OS=Mus musculus GN=Kif3... [more]
KIF11_MOUSE2.231e-2442.77Kinesin-like protein KIF11 OS=Mus musculus GN=Kif1... [more]
KIF11_HUMAN2.231e-2442.20Kinesin-like protein KIF11 OS=Homo sapiens GN=KIF1... [more]
CIN8_ASHGO2.231e-2443.97Kinesin-like protein CIN8 OS=Ashbya gossypii GN=CI... [more]
KIF15_RAT2.914e-2444.52Kinesin-like protein KIF15 OS=Rattus norvegicus GN... [more]
KIF15_MOUSE2.914e-2445.16Kinesin-like protein KIF15 OS=Mus musculus GN=Kif1... [more]
KIF14_HUMAN2.914e-2444.59Kinesin-like protein KIF14 OS=Homo sapiens GN=KIF1... [more]
CIN8_YEAST2.914e-2442.55Kinesin-like protein CIN8 OS=Saccharomyces cerevis... [more]
KLP1_CHLRE3.805e-2442.31Kinesin-like protein KLP1 OS=Chlamydomonas reinhar... [more]
KIF7_HUMAN3.805e-2440.74Kinesin-like protein KIF7 OS=Homo sapiens GN=KIF7 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_62A05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62A05-B10-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675400 ID=CX675400; Name=CX675400; organism=Citrus sinensis; type=EST; length=809bp
TTTTTTTTTAACAGAGTGAAAAGGACTCAATTTCACTATCAATAAAAGTA
CATATTACAGAAATTGCTTCCGCGGTTCTACCTTCAAATTGTATTCATCA
ACTGATGAACTTTGTCATACAACAAACAATAGTCACCTTTATAAGCCAAT
AAATTAACTATCATGCAATGAAAAGCAAAATTAAGATCCTATAATCTCAC
CATGACAACCCACTCCAGTGCATGTGGGACACAGTCATTATGAACATGAC
AAAGTAAACACGTCAGTATTTCAACCATAACTCAACCGAGAATCAGCAGC
CTTCAAAGTCAATTGGCGACTGGGAACCCCAATTTCGCAGGCATTGACTC
TCGCAGCAAACCGTAGAGAGCAAAGGGACTCACCAACGGACGGAGAATCA
GGCGAGATGTTAACAAACATTAAAGTTTTAGAATCTCTCCCAAGACACGG
CTGAAGAAGATATGTCAGCTTCGAGTTCCTATATGGAATATGATCCTCCT
TCTTTGCCAAGGCAAATATAACATCACTCAATGATGACAGGCTTTTATTT
ATGGCCTGAGTTTCTTTCAAACGGTCACCAGTCGCCCCACTTCTTGATAA
TCGCTCACTTCCAGCTAGATCAATGAGGTTTAAGACACCCTGTACTTGTT
GTTCAGTTGCTTCATTTACTCCAAATATTCGTAACGTGAAGACAAAATGG
CTTCTTGATGAATACTCATTCATTTGAGTCTTGCCCACAGACCTGCTCTG
TGCAGCCTGCCTTAAAAGCGATGAAATCTCTGATATGCTACAGACATCAA
CAATCGTAA
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