CX675400

Overview
NameCX675400
Unique NameCX675400
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length809
Libraries
Library NameType
Parent Washington Navel Orange Callus cDNA Library UCRCS08-3cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIF3C_BOVIN (Kinesin-like protein KIF3C OS=Bos taurus GN=KIF3C PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.805e-24
Identity = 71/173 (41.04%), Postives = 97/173 (56.07%), Query Frame = -3
Query:  349 SISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQ---GVLNLIDLAGSERLSRSGAT----------------------GDRLKETQAINKSLSSLSDVIFALA-KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 789
            ++ EI  ++    Q+R+VG T MNE SSRSH +F + +      ++ Q     G LNL+DLAGSER +++G                        G+R KE   IN SLS+L +VI AL+  +  HIPYR+SKLT LLQ  LG ++KT+M   + P S S  ESL +LRFA R
Sbjct:  187 NVKEIEHVMNLGNQTRAVGSTHMNEVSSRSHAIFVITVECSERGSDGQDHIRVGKLNLVDLAGSERQNKAGPNTTGGTATQPTGGGGGGGGGGGGGERPKEASKINLSLSALGNVIAALSGNRSTHIPYRDSKLTRLLQDSLGGNAKTIMVATLGPASHSYDESLSTLRFANR 359          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIF1A_DROPS (Kinesin-like protein unc-104 OS=Drosophila pseudoobscura pseudoobscura GN=unc-104 PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.805e-24
Identity = 73/163 (44.79%), Postives = 98/163 (60.12%), Query Frame = -3
Query:  349 VCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTL-----RIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA---------KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 795
            V    +I  L+ +  ++R+V  T MNE SSRSH VFT+     R   + + T ++V  + +L+DLAGSER   +GA G RLKE   INKSL++L  VI ALA         KK D IPYR+S LT+LL+  LG +SKT M   ISP   +  E+L +LR+A R
Sbjct:  186 VTDYQDIHDLIDEGNKARTVAATNMNETSSRSHAVFTIFFTQRRHDTMTDLTTEKVSKI-SLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEVASKKKHNKKADFIPYRDSALTWLLRENLGGNSKTAMIAAISPADINYDETLSTLRYADR 347          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIF1A_ANOGA (Kinesin-like protein unc-104 OS=Anopheles gambiae GN=unc-104 PE=3 SV=3)

HSP 1 Score: 112.079 bits (279), Expect = 3.805e-24
Identity = 72/162 (44.44%), Postives = 96/162 (59.26%), Query Frame = -3
Query:  349 VCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNE----ATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA---------KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 795
            V S  +I  L+ +  ++R+V  T MNE SSRSH VFT+      +    + E +    ++L+DLAGSER   +GA G RLKE   INKSL++L  VI ALA         KK D IPYR+S LT+LL+  LG +SKT M   ISP   +  E+L +LR+A R
Sbjct:  186 VTSYQDIHDLIDEGNKARTVAATNMNETSSRSHAVFTIFFTQKRQDRMTSLETEKVSKISLVDLAGSERADSTGAKGTRLKEGANINKSLTTLGKVISALAEIASKNKKSKKADFIPYRDSVLTWLLRENLGGNSKTAMIAAISPADINYDETLSTLRYADR 347          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIF4_XENLA (Chromosome-associated kinesin KIF4 OS=Xenopus laevis GN=kif4 PE=2 SV=1)

HSP 1 Score: 111.694 bits (278), Expect = 4.970e-24
Identity = 70/154 (45.45%), Postives = 94/154 (61.04%), Query Frame = -3
Query:  349 DVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQ-VQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFAL---AKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 798
            DV +  +  S L Q   SR+V  T MN  SSRSH +FT+ I    E  +    +  L+L+DLAGSER  ++ A GDRLKE  +IN+ L  L +VI AL   +KK   +PYR+SKLT LLQ  LG +S TLM   +SP   ++ E+L +LR+A R
Sbjct:  180 DVKTALDTLSCLEQGNSSRTVASTAMNSQSSRSHAIFTISIEQRKEGDKNNSFRSKLHLVDLAGSERQKKTKAEGDRLKEGISINRGLLCLGNVISALGDESKKGGFVPYRDSKLTRLLQDSLGGNSHTLMIACVSPADSNMEETLNTLRYADR 333          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: K125_TOBAC (125 kDa kinesin-related protein OS=Nicotiana tabacum GN=TKRP125 PE=1 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.491e-24
Identity = 72/178 (40.45%), Postives = 103/178 (57.87%), Query Frame = -3
Query:  274 VCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQ----GVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNACEIGVPSRQLTLKAADSRLSYG 795
            V S +EI +LL + +  R   +T +N+ SSRSH +F++ I  + EAT +  +    G LNL+DLAGSE +SRSGA   R +E   INKSL +L  VI AL +   HIPYR+SKLT LL+  LG  +KT +   +SP    + E+L +L +A R    +      Q  +K+   +  YG
Sbjct:  200 VTSANEIFTLLERGSAKRRTAETLLNKQSSRSHSLFSITIH-IKEATPEGEELIKCGKLNLVDLAGSENISRSGAREGRAREAGEINKSLLTLGRVINALVEHLGHIPYRDSKLTRLLRDSLGGRTKTCIIATVSPAVHCLEETLSTLDYAHRAKNIKNKPEVNQKMMKSTLIKDLYG 376          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: K125_ARATH (Probable 125 kDa kinesin-related protein OS=Arabidopsis thaliana GN=At2g36200 PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.491e-24
Identity = 67/153 (43.79%), Postives = 95/153 (62.09%), Query Frame = -3
Query:  349 VCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQ----GVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 795
            V S +EI +LL + +  R   +T +N+ SSRSH +F++ I  + EAT +  +    G LNL+DLAGSE +SRSGA   R +E   INKSL +L  VI AL +   H+PYR+SKLT LL+  LG  +KT +   +SP    + E+L +L +A R
Sbjct:  204 VTSANEIFTLLERGSSKRRTAETFLNKQSSRSHSLFSITIH-IKEATPEGEELIKCGKLNLVDLAGSENISRSGARDGRAREAGEINKSLLTLGRVISALVEHLGHVPYRDSKLTRLLRDSLGGRTKTCIIATVSPAVHCLEETLSTLDYAHR 355          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: EG51_XENLA (Kinesin-related motor protein Eg5 1 OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 6.491e-24
Identity = 68/158 (43.04%), Postives = 96/158 (60.76%), Query Frame = -3
Query:  340 VDVCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEAT---EQQVQ-GVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNA 801
            + V +  E+  +L + A  R    T MN YSSRSH VF++ I  + E T   E+ V+ G LNL+DLAGSE + RSGA   R +E   IN+SL +L  VI AL ++  HIPYR SKLT +LQ  LG  +KT +   +SP S ++ E++ +L +A R  +
Sbjct:  195 ISVHNKDEVYHILERGAARRKTASTLMNAYSSRSHSVFSVTIH-MKETTVDGEELVKIGKLNLVDLAGSENIGRSGAVDKRAREAGNINQSLLTLGRVITALVERTPHIPYRESKLTRILQDSLGGRTKTSIIATVSPASINLEETVSTLDYANRAKS 351          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIP1_YEAST (Kinesin-like protein KIP1 OS=Saccharomyces cerevisiae GN=KIP1 PE=1 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.477e-24
Identity = 69/157 (43.95%), Postives = 90/157 (57.32%), Query Frame = -3
Query:  340 SISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQ-------GVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAARVNA 789
            S  E  +LL Q +  R V  T+ N+ SSRSH VFT+    V + ++   Q       G LNL+DLAGSE ++RSGA   R +E   INKSL +L  VI AL    +HIPYR SKLT LLQ  LG  +KT +   ISP   S+ E+  +L +A R  +
Sbjct:  253 SAHEGLNLLMQGSLKRKVAATKCNDLSSRSHTVFTITTNIVEQDSKDHGQNKNFVKIGKLNLVDLAGSENINRSGAENKRAQEAGLINKSLLTLGRVINALVDHSNHIPYRESKLTRLLQDSLGGMTKTCIIATISPAKISMEETASTLEYATRAKS 409          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIF7_DICDI (Kinesin-related protein 7 OS=Dictyostelium discoideum GN=kif7 PE=2 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 8.477e-24
Identity = 61/149 (40.94%), Postives = 93/149 (62.42%), Query Frame = -3
Query:  349 VCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGVLNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALAKKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 795
            + SI E  + L  +  +R++  T+M+  SSRSH V  + +   N + E      L L+DLAGSER  ++GA GDR++E + IN SLS+L  VI AL    +++PYR+SKLT +LQ  LG +SKT + +N SP + +  E++ +L+F  R
Sbjct:  197 ITSIEEAYNFLNISNNNRAIASTKMSAASSRSHSVLMIELSQQNLSMESSKISKLFLVDLAGSERAHKTGAEGDRMQEAKNINLSLSALGKVINALTCGANYVPYRDSKLTRVLQDSLGGNSKTSLIINCSPSNNNEHETITTLQFGTR 345          
BLAST of CX675400 vs. ExPASy Swiss-Prot
Match: KIF1C_MOUSE (Kinesin-like protein KIF1C OS=Mus musculus GN=Kif1c PE=1 SV=2)

HSP 1 Score: 110.538 bits (275), Expect = 1.107e-23
Identity = 72/162 (44.44%), Postives = 101/162 (62.35%), Query Frame = -3
Query:  349 VCSISEISSLLRQAAQSRSVGKTQMNEYSSRSHFVFTLRIFGVNEATEQQVQGV-------LNLIDLAGSERLSRSGATGDRLKETQAINKSLSSLSDVIFALA------KKEDHIPYRNSKLTYLLQPCLGRDSKTLMFVNISPDSPSVGESLCSLRFAAR 795
            V S ++I+ L+    ++R+V  T MNE SSRSH VFT+ +F   + +  Q+ G+       ++L+DLAGSER   SGA G RLKE   INKSL++L  VI ALA      +K D IPYR+S LT+LL+  LG +S+T M   +SP   +  E+L +LR+A R
Sbjct:  186 VTSYADIADLMDCGNKARTVAATNMNETSSRSHAVFTI-VF--TQRSHDQLTGLDSEKVSKISLVDLAGSERADSSGARGMRLKEGANINKSLTTLGKVISALADLQSKKRKSDFIPYRDSVLTWLLKENLGGNSRTAMIAALSPADINYEETLSTLRYADR 344          
The following BLAST results are available for this feature:
BLAST of CX675400 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 193
Match NameE-valueIdentityDescription
KIF3C_BOVIN3.805e-2441.04Kinesin-like protein KIF3C OS=Bos taurus GN=KIF3C ... [more]
KIF1A_DROPS3.805e-2444.79Kinesin-like protein unc-104 OS=Drosophila pseudoo... [more]
KIF1A_ANOGA3.805e-2444.44Kinesin-like protein unc-104 OS=Anopheles gambiae ... [more]
KIF4_XENLA4.970e-2445.45Chromosome-associated kinesin KIF4 OS=Xenopus laev... [more]
K125_TOBAC6.491e-2440.45125 kDa kinesin-related protein OS=Nicotiana tabac... [more]
K125_ARATH6.491e-2443.79Probable 125 kDa kinesin-related protein OS=Arabid... [more]
EG51_XENLA6.491e-2443.04Kinesin-related motor protein Eg5 1 OS=Xenopus lae... [more]
KIP1_YEAST8.477e-2443.95Kinesin-like protein KIP1 OS=Saccharomyces cerevis... [more]
KIF7_DICDI8.477e-2440.94Kinesin-related protein 7 OS=Dictyostelium discoid... [more]
KIF1C_MOUSE1.107e-2344.44Kinesin-like protein KIF1C OS=Mus musculus GN=Kif1... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS08_62A05_b Parent Washington Navel Orange Callus cDNA Library UCRCS08-3 Citrus sinensis cDNA clone UCRCS08-62A05-B10-1-6.b, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX675400 ID=CX675400; Name=CX675400; organism=Citrus sinensis; type=EST; length=809bp
TTTTTTTTTAACAGAGTGAAAAGGACTCAATTTCACTATCAATAAAAGTA
CATATTACAGAAATTGCTTCCGCGGTTCTACCTTCAAATTGTATTCATCA
ACTGATGAACTTTGTCATACAACAAACAATAGTCACCTTTATAAGCCAAT
AAATTAACTATCATGCAATGAAAAGCAAAATTAAGATCCTATAATCTCAC
CATGACAACCCACTCCAGTGCATGTGGGACACAGTCATTATGAACATGAC
AAAGTAAACACGTCAGTATTTCAACCATAACTCAACCGAGAATCAGCAGC
CTTCAAAGTCAATTGGCGACTGGGAACCCCAATTTCGCAGGCATTGACTC
TCGCAGCAAACCGTAGAGAGCAAAGGGACTCACCAACGGACGGAGAATCA
GGCGAGATGTTAACAAACATTAAAGTTTTAGAATCTCTCCCAAGACACGG
CTGAAGAAGATATGTCAGCTTCGAGTTCCTATATGGAATATGATCCTCCT
TCTTTGCCAAGGCAAATATAACATCACTCAATGATGACAGGCTTTTATTT
ATGGCCTGAGTTTCTTTCAAACGGTCACCAGTCGCCCCACTTCTTGATAA
TCGCTCACTTCCAGCTAGATCAATGAGGTTTAAGACACCCTGTACTTGTT
GTTCAGTTGCTTCATTTACTCCAAATATTCGTAACGTGAAGACAAAATGG
CTTCTTGATGAATACTCATTCATTTGAGTCTTGCCCACAGACCTGCTCTG
TGCAGCCTGCCTTAAAAGCGATGAAATCTCTGATATGCTACAGACATCAA
CAATCGTAA
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